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Lag0032780 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032780
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:37459112..37465155
RNA-Seq ExpressionLag0032780
SyntenyLag0032780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018821989.1 uncharacterized protein LOC108992010 [Juglans regia]2.7e-4745.92Show/hide
Query:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE
        P   H L  DD+++F KA+ +E +  + ++ +YE + GQ IN +K+  + + N+  +T+E   N  G++  +  ++YLG+ S +GR+K R F +IK  V 
Subjt:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE

Query:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ
        R LQGWKEK+ S GGKEVLIK++AQAIP Y++SCF++P+ +CN+++++ AKFWWG   ++ K HW+ WKKM   K+ GGMGFK+L  FN A+LAKQ
Subjt:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ

XP_021836918.1 uncharacterized protein LOC110776679 [Spinacia oleracea]8.1e-4446.94Show/hide
Query:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE
        P   H    DD+I+F KAS  E      +I  YE+A GQ++NL K+  + +K++N+  R+     LG+K ++  ++YLG+ + IG++K  VF  +KE + 
Subjt:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE

Query:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ
        + LQGWKEKL S  GKEVLIK++AQAIP Y +S F+IP+ + ++I  LCA+FWWGS G   K HW  W+ MC  K  GGMGF++L  FNQA+LAKQ
Subjt:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ

XP_023899813.1 uncharacterized protein LOC112011695 [Quercus suber]6.2e-4447.5Show/hide
Query:  GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENI---LGIKYMKSLDQYLGMLSQIGRNKGRVFRKIK
        GP   H    DD++IF KAS  + E  + V+  YEKA GQ +N +K++   + N   T +E++E I    G + +K  ++YLG+ S +GRNK   F  IK
Subjt:  GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENI---LGIKYMKSLDQYLGMLSQIGRNKGRVFRKIK

Query:  EMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ
        E V R L GWKEKL S  GKEVLIK++AQAIP YT+SCF+IP+ +C+++  +   FWWG   +++K  W+RW+KMC  K  GGMGFK L  FN A+LAKQ
Subjt:  EMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ

XP_023923430.1 uncharacterized protein LOC112034844 [Quercus suber]3.6e-4445.18Show/hide
Query:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE
        P   H L  DD+++F +++++E +   +++  YEK  GQ IN  K+    +++ +   RE  + ILG+  +K  ++YLG+ S +GRNK   F  IKE V 
Subjt:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE

Query:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQS
        R +QGWKEKL S   +EVLIKS+ QAIP YT+SCF++P  +C++I+ L  KFWWG  GD+ K HW++W  +C  K  GGMGFK+L  FN A+LAKQ+
Subjt:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQS

XP_030940268.1 uncharacterized protein LOC115965235 [Quercus lobata]1.1e-4344.67Show/hide
Query:  GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMV
        GP   H L  DD++IF +AS  + +T + ++  YE A GQ IN  K+    + N    T+E  +N+L +  ++  +QYLG+ S +GR K R F  IKE +
Subjt:  GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMV

Query:  ERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ
         + L+GWKEKL S  G+E+LIK++ QAIP YT+SCF++P  + N+I+ L  KFWWG  G++ + HW+ W+K+C  K  GGMGF+EL+ FN ++LAKQ
Subjt:  ERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ

TrEMBL top hitse value%identityAlignment
A0A2I4ERH4 uncharacterized protein LOC1089920101.3e-4745.92Show/hide
Query:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE
        P   H L  DD+++F KA+ +E +  + ++ +YE + GQ IN +K+  + + N+  +T+E   N  G++  +  ++YLG+ S +GR+K R F +IK  V 
Subjt:  PTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVE

Query:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ
        R LQGWKEK+ S GGKEVLIK++AQAIP Y++SCF++P+ +CN+++++ AKFWWG   ++ K HW+ WKKM   K+ GGMGFK+L  FN A+LAKQ
Subjt:  RILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ

A0A2N9E7R2 Reverse transcriptase domain-containing protein9.3e-4644.5Show/hide
Query:  QTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRN
        Q E QG+     GP   H    DD+++F KA+ ++    + ++  YE+A GQ IN  K+    +K     T+E  +N LG+  +K  ++YLG+ S +G+N
Subjt:  QTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRN

Query:  KGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTT
        +   F ++KE V   L GWKEKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  W++W  +C  KD GGMGF+EL  
Subjt:  KGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTT

Query:  FNQAMLAKQ
        FN+A+L KQ
Subjt:  FNQAMLAKQ

A0A2N9HXE3 Uncharacterized protein1.6e-4544.29Show/hide
Query:  QTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRN
        Q E QG+     GP   H    DD+++F KA+ ++    + ++  YE+A GQ IN  K+    +K     T+E  +N LG+  +K  ++YLG+ S +G+N
Subjt:  QTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRN

Query:  KGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTT
        +   F ++KE V   L GWKEKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  W++W  +C  KD GGMGF+EL  
Subjt:  KGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTT

Query:  FNQAMLAKQS
        FN+A+L KQ+
Subjt:  FNQAMLAKQS

A0A2N9HZ12 Uncharacterized protein9.3e-4643.4Show/hide
Query:  ARDQTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQI
        A +Q + QG+     GP   H    DD+++F KA+ K+    ++++  YE+ALGQ +N  K+    +K     T+E   + LG+  +K  ++YLG+ S +
Subjt:  ARDQTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQI

Query:  GRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKE
        G+N+   F ++KE V   L GWKEKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  W++W  +C  KD GGMGF++
Subjt:  GRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKE

Query:  LTTFNQAMLAKQ
        L  FN A+L KQ
Subjt:  LTTFNQAMLAKQ

A0A2N9IXD3 Uncharacterized protein2.7e-4542.92Show/hide
Query:  ARDQTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQI
        A +Q E QG+     GP   H    DD+++F KA+ ++    ++++  YE+A GQ +N  K+    +K     T+   ++ LG+  +K  ++YLG+ S +
Subjt:  ARDQTEAQGL-----GPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAFMTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQI

Query:  GRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKE
        G+N+   F ++KE V   L GWKEKL S  G+EVLIKS+AQAIP YT+SCFR+PN +C D++ +  KFWWG   DK+K  W++W  +C  KD GGMGF+E
Subjt:  GRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKE

Query:  LTTFNQAMLAKQ
        L  FN A+L KQ
Subjt:  LTTFNQAMLAKQ

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.9e-1634.62Show/hide
Query:  FRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQA
        F +I E V   + GW+EK  S  G+  L K++  ++P++++S   +P  I N +D+L   F WGS  +K K H ++W K+C+ K  GG+G +   + N+A
Subjt:  FRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQA

Query:  MLAK
        +++K
Subjt:  MLAK

P93295 Uncharacterized mitochondrial protein AtMg003104.8e-1546.58Show/hide
Query:  AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNK-DRGGMGFKELTTFNQAMLAKQS
        A+P+Y +SCFR+   +C  +     +FWW S  +K K  W+ W+K+C +K D GG+GF++L  FNQA+LAKQS
Subjt:  AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNK-DRGGMGFKELTTFNQAMLAKQS

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-1239.44Show/hide
Query:  AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ
        A+P YT++CF +P  +C  I  + A FWW +  +    HW  W  +   K  GG+GFK++  FN A+L KQ
Subjt:  AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQ

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.4e-1646.58Show/hide
Query:  AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNK-DRGGMGFKELTTFNQAMLAKQS
        A+P+Y +SCFR+   +C  +     +FWW S  +K K  W+ W+K+C +K D GG+GF++L  FNQA+LAKQS
Subjt:  AIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIGDKDKHHWMRWKKMCTNK-DRGGMGFKELTTFNQAMLAKQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTTCTAAAGCTGCCTGCAAATCAAAGGAATGAAGGAAGGAAGGAAAGGAAGAGGAAGGGGTATGTGAAATTACGGAAATGGGTTTCTGTAACGAGGGTTTCTAG
ACTTTCGGAGACGATTCAGGCTAAACTATGTGGAACCGGGACGGCCAGGGACCAAACAGAGGCACAGGGGCTAGGGCCAACCCATTTACATTGTCTCTCCTTCGATGACA
ACATTATCTTCCTCAAAGCAAGCAAGAAGGAATTCGAAACTTCCAAAAAGGTGATCGGTTGGTACGAGAAAGCCTTGGGACAGGCCATCAACCTCAGCAAGTCCGCCTTT
ATGACCAACAAGAACATGAACCTCACAACCAGGGAGATGAGGGAGAACATTCTTGGGATCAAGTACATGAAATCTCTAGATCAATACTTGGGGATGCTTTCTCAGATTGG
GCGAAATAAAGGTAGGGTATTCAGAAAAATTAAAGAAATGGTGGAGAGAATCCTTCAAGGATGGAAGGAAAAGCTCTTCTCCTTGGGAGGAAAAGAAGTGCTCATCAAAT
CAATTGCCCAAGCCATCCCGATGTATACACTGAGTTGTTTTCGTATCCCTAACTACATATGCAATGACATTGACAAGTTATGTGCCAAATTCTGGTGGGGTTCGATAGGA
GATAAAGATAAACACCACTGGATGAGGTGGAAAAAGATGTGCACCAACAAGGACAGAGGAGGAATGGGTTTTAAAGAGCTCACAACCTTCAACCAAGCCATGCTCGCGAA
ACAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTTCTAAAGCTGCCTGCAAATCAAAGGAATGAAGGAAGGAAGGAAAGGAAGAGGAAGGGGTATGTGAAATTACGGAAATGGGTTTCTGTAACGAGGGTTTCTAG
ACTTTCGGAGACGATTCAGGCTAAACTATGTGGAACCGGGACGGCCAGGGACCAAACAGAGGCACAGGGGCTAGGGCCAACCCATTTACATTGTCTCTCCTTCGATGACA
ACATTATCTTCCTCAAAGCAAGCAAGAAGGAATTCGAAACTTCCAAAAAGGTGATCGGTTGGTACGAGAAAGCCTTGGGACAGGCCATCAACCTCAGCAAGTCCGCCTTT
ATGACCAACAAGAACATGAACCTCACAACCAGGGAGATGAGGGAGAACATTCTTGGGATCAAGTACATGAAATCTCTAGATCAATACTTGGGGATGCTTTCTCAGATTGG
GCGAAATAAAGGTAGGGTATTCAGAAAAATTAAAGAAATGGTGGAGAGAATCCTTCAAGGATGGAAGGAAAAGCTCTTCTCCTTGGGAGGAAAAGAAGTGCTCATCAAAT
CAATTGCCCAAGCCATCCCGATGTATACACTGAGTTGTTTTCGTATCCCTAACTACATATGCAATGACATTGACAAGTTATGTGCCAAATTCTGGTGGGGTTCGATAGGA
GATAAAGATAAACACCACTGGATGAGGTGGAAAAAGATGTGCACCAACAAGGACAGAGGAGGAATGGGTTTTAAAGAGCTCACAACCTTCAACCAAGCCATGCTCGCGAA
ACAAAGCTGA
Protein sequenceShow/hide protein sequence
MFLLKLPANQRNEGRKERKRKGYVKLRKWVSVTRVSRLSETIQAKLCGTGTARDQTEAQGLGPTHLHCLSFDDNIIFLKASKKEFETSKKVIGWYEKALGQAINLSKSAF
MTNKNMNLTTREMRENILGIKYMKSLDQYLGMLSQIGRNKGRVFRKIKEMVERILQGWKEKLFSLGGKEVLIKSIAQAIPMYTLSCFRIPNYICNDIDKLCAKFWWGSIG
DKDKHHWMRWKKMCTNKDRGGMGFKELTTFNQAMLAKQS