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Lag0032805 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032805
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:37751601..37752146
RNA-Seq ExpressionLag0032805
SyntenyLag0032805
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]3.1e-1831.46Show/hide
Query:  DDEDLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI-IDKVGFNIFFCKFKNVKIKGWILDSGPWF
        + +D+ ++ + L +   +   + ++  S  +R EQ L  +++ K  T K IN   F S +  IW  +N + ++ +G NIF  +F+N   +  IL+ GPW 
Subjt:  DDEDLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI-IDKVGFNIFFCKFKNVKIKGWILDSGPWF

Query:  YDKARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV
        +DK  L+  E        D++FRYV  W   H LP AC +R     +G L+G V+ +D  +  E  G  +RI++ IDV
Subjt:  YDKARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.3e-1828.98Show/hide
Query:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI--IDKVGFNIFFCKFKNVKIKGWILDSGPWFYD
        +L+++ ++  +T  E      +  S ++ + + LE +++CK+ +K+ I+  +  + +   W  +     +D +GFNIF   F     +  IL  GPW +D
Subjt:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI--IDKVGFNIFFCKFKNVKIKGWILDSGPWFYD

Query:  KARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQ-DDVEWGCSLRIKIQIDV
        +A ++ + P +     DM+FR VSLW HF  L  AC ++T    +GN +G  E+V+   ++  WG  LR++++ DV
Subjt:  KARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQ-DDVEWGCSLRIKIQIDV

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.5e-1737.98Show/hide
Query:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL
        DE L + ++ L +T  E+  +F + + EI D  E ++E+       +++CK+ T K I   +F + MP+IW   N  I+ VG N+F CKFK V+ K  IL
Subjt:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL

Query:  DSGPWFYDKARLLFEEPKAGVSCDDMEFR
        ++GPWF+DK+ ++ EEP+A  + +++EFR
Subjt:  DSGPWFYDKARLLFEEPKAGVSCDDMEFR

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]9.1e-1837.78Show/hide
Query:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL
        DE L + ++ L +T  E+  +F + + EI D  E ++E+       +++CK+ T K I   +F + MP+IW   N  I+ VG N+F CKFK V+ K  IL
Subjt:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL

Query:  DSGPWFYDKARLLFEEPKAGVSCDDMEFRYVSLWT
        ++GPWF+DK+ ++ EEP+A  + +++EFR  + WT
Subjt:  DSGPWFYDKARLLFEEPKAGVSCDDMEFRYVSLWT

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.6e-1727.43Show/hide
Query:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWN-QENTIIDKVGFNIFFCKFKNVKIKGWILDSGPWFYDK
        D + +L +      E+     +   +   + + ++   + K+HT K+I+   F S M  +W   E+T I+  G N++   FK++  K  +L SGPW ++ 
Subjt:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWN-QENTIIDKVGFNIFFCKFKNVKIKGWILDSGPWFYDK

Query:  ARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV
        + L+   P A     DM F + +LW   H +P+ C  +   + +G  +G VE +D     EW G  +R+++QID+
Subjt:  ARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein1.5e-1831.46Show/hide
Query:  DDEDLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI-IDKVGFNIFFCKFKNVKIKGWILDSGPWF
        + +D+ ++ + L +   +   + ++  S  +R EQ L  +++ K  T K IN   F S +  IW  +N + ++ +G NIF  +F+N   +  IL+ GPW 
Subjt:  DDEDLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI-IDKVGFNIFFCKFKNVKIKGWILDSGPWF

Query:  YDKARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV
        +DK  L+  E        D++FRYV  W   H LP AC +R     +G L+G V+ +D  +  E  G  +RI++ IDV
Subjt:  YDKARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV

A0A6J1BSZ1 uncharacterized protein LOC1110054812.6e-1828.98Show/hide
Query:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI--IDKVGFNIFFCKFKNVKIKGWILDSGPWFYD
        +L+++ ++  +T  E      +  S ++ + + LE +++CK+ +K+ I+  +  + +   W  +     +D +GFNIF   F     +  IL  GPW +D
Subjt:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTI--IDKVGFNIFFCKFKNVKIKGWILDSGPWFYD

Query:  KARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQ-DDVEWGCSLRIKIQIDV
        +A ++ + P +     DM+FR VSLW HF  L  AC ++T    +GN +G  E+V+   ++  WG  LR++++ DV
Subjt:  KARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQ-DDVEWGCSLRIKIQIDV

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X17.5e-1837.98Show/hide
Query:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL
        DE L + ++ L +T  E+  +F + + EI D  E ++E+       +++CK+ T K I   +F + MP+IW   N  I+ VG N+F CKFK V+ K  IL
Subjt:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL

Query:  DSGPWFYDKARLLFEEPKAGVSCDDMEFR
        ++GPWF+DK+ ++ EEP+A  + +++EFR
Subjt:  DSGPWFYDKARLLFEEPKAGVSCDDMEFR

A0A6J1DP89 uncharacterized protein LOC1110229321.3e-1727.43Show/hide
Query:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWN-QENTIIDKVGFNIFFCKFKNVKIKGWILDSGPWFYDK
        D + +L +      E+     +   +   + + ++   + K+HT K+I+   F S M  +W   E+T I+  G N++   FK++  K  +L SGPW ++ 
Subjt:  DLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWN-QENTIIDKVGFNIFFCKFKNVKIKGWILDSGPWFYDK

Query:  ARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV
        + L+   P A     DM F + +LW   H +P+ C  +   + +G  +G VE +D     EW G  +R+++QID+
Subjt:  ARLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEW-GCSLRIKIQIDV

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X24.4e-1837.78Show/hide
Query:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL
        DE L + ++ L +T  E+  +F + + EI D  E ++E+       +++CK+ T K I   +F + MP+IW   N  I+ VG N+F CKFK V+ K  IL
Subjt:  DEDLVKQLQDLHVTPAERASVFQLPDSEI-DRSEQKLEN-------TILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWIL

Query:  DSGPWFYDKARLLFEEPKAGVSCDDMEFRYVSLWT
        ++GPWF+DK+ ++ EEP+A  + +++EFR  + WT
Subjt:  DSGPWFYDKARLLFEEPKAGVSCDDMEFRYVSLWT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACGACGAGGATTTGGTGAAGCAACTACAGGACCTTCATGTGACTCCTGCAGAAAGAGCTAGTGTTTTTCAACTCCCTGACAGCGAGATAGACCGATCAGAACA
GAAACTAGAGAATACGATATTGTGCAAAATACACACAAAGAAGAAAATTAATCCAAACATGTTTAGTTCAAAAATGCCAAAGATATGGAATCAAGAGAATACAATTATCG
ATAAGGTGGGATTCAATATTTTCTTTTGCAAGTTCAAGAATGTGAAGATCAAAGGATGGATCTTAGATTCCGGACCATGGTTCTACGATAAAGCTAGGCTTTTATTCGAG
GAGCCTAAGGCGGGAGTTAGCTGCGATGACATGGAATTTAGGTACGTCTCTCTCTGGACTCATTTTCATAAGTTACCGTATGCTTGTTTTTCTAGGACATCGACAGAAGG
CATTGGAAATCTATTGGGAAATGTGGAAAACGTGGACGTTCAAGATGATGTTGAATGGGGATGTTCGTTACGTATTAAAATTCAAATTGATGTGCATAGCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACGACGAGGATTTGGTGAAGCAACTACAGGACCTTCATGTGACTCCTGCAGAAAGAGCTAGTGTTTTTCAACTCCCTGACAGCGAGATAGACCGATCAGAACA
GAAACTAGAGAATACGATATTGTGCAAAATACACACAAAGAAGAAAATTAATCCAAACATGTTTAGTTCAAAAATGCCAAAGATATGGAATCAAGAGAATACAATTATCG
ATAAGGTGGGATTCAATATTTTCTTTTGCAAGTTCAAGAATGTGAAGATCAAAGGATGGATCTTAGATTCCGGACCATGGTTCTACGATAAAGCTAGGCTTTTATTCGAG
GAGCCTAAGGCGGGAGTTAGCTGCGATGACATGGAATTTAGGTACGTCTCTCTCTGGACTCATTTTCATAAGTTACCGTATGCTTGTTTTTCTAGGACATCGACAGAAGG
CATTGGAAATCTATTGGGAAATGTGGAAAACGTGGACGTTCAAGATGATGTTGAATGGGGATGTTCGTTACGTATTAAAATTCAAATTGATGTGCATAGCCGTTGA
Protein sequenceShow/hide protein sequence
MEDDEDLVKQLQDLHVTPAERASVFQLPDSEIDRSEQKLENTILCKIHTKKKINPNMFSSKMPKIWNQENTIIDKVGFNIFFCKFKNVKIKGWILDSGPWFYDKARLLFE
EPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSTEGIGNLLGNVENVDVQDDVEWGCSLRIKIQIDVHSR