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Lag0032807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr11:37770173..37770568
RNA-Seq ExpressionLag0032807
SyntenyLag0032807
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5B6UIP8 Reverse transcriptase9.9e-0434.18Show/hide
Query:  KAILIGLEAIQRTCIQKRIGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLAR
        +A+++ L+   R  +       VE D+LSVIK++   + D S L+P+ ++I  L ++  E+S+ H  RS+N +AH+LA+
Subjt:  KAILIGLEAIQRTCIQKRIGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLAR
A0A5B6W9Y0 Reverse transcriptase5.8e-0434.18Show/hide
Query:  KAILIGLEAIQRTCIQKRIGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLAR
        +A+++ L+   R  +       VE D+LSVIK++   ++D S L+P+ ++I  L ++  E+S+ H  RS+N +AH LA+
Subjt:  KAILIGLEAIQRTCIQKRIGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLAR
A0A803NST3 Uncharacterized protein1.2e-0439.22Show/hide
Query:  MEAKAILIGLEAIQRTCIQKR-IGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLARAASSS----IFVGENQE
        +EAKA+L    ++ R CI +  +  EVESD  +VI A+    DD+S    LI  I    S L +V  FH NR++NS+A +LA  AS S    +++G++  
Subjt:  MEAKAILIGLEAIQRTCIQKR-IGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLARAASSS----IFVGENQE

Query:  NL
        NL
Subjt:  NL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAAAAGCGATTTTGATCGGTCTCGAAGCTATTCAACGAACCTGTATCCAAAAGCGAATTGGGCTGGAGGTTGAATCCGACGCCCTCTCTGTGATTAAGGCTCT
GGTTGGAGAAGACGATGATCTGTCGTATCTCAAGCCGCTAATAGAGTCAATCGTGGTCCTCTCCTCTAAATTACGAGAGGTTTCTTTTTTCCATTGTAATCGTTCTTCTA
ACTCGATAGCCCACCGGTTAGCAAGAGCCGCATCTTCTTCAATTTTTGTGGGTGAGAATCAGGAAAATCTCCATCTGAGGGATTCTGGGCATGTGTATTTTGGTCCCCTG
ATTTTCCCCCATGTTTTTTCCCTCTTTTCATTGAGGGTAGTTGGAACGTTCCTTAGCTCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAAAAGCGATTTTGATCGGTCTCGAAGCTATTCAACGAACCTGTATCCAAAAGCGAATTGGGCTGGAGGTTGAATCCGACGCCCTCTCTGTGATTAAGGCTCT
GGTTGGAGAAGACGATGATCTGTCGTATCTCAAGCCGCTAATAGAGTCAATCGTGGTCCTCTCCTCTAAATTACGAGAGGTTTCTTTTTTCCATTGTAATCGTTCTTCTA
ACTCGATAGCCCACCGGTTAGCAAGAGCCGCATCTTCTTCAATTTTTGTGGGTGAGAATCAGGAAAATCTCCATCTGAGGGATTCTGGGCATGTGTATTTTGGTCCCCTG
ATTTTCCCCCATGTTTTTTCCCTCTTTTCATTGAGGGTAGTTGGAACGTTCCTTAGCTCTGAATGA
Protein sequenceShow/hide protein sequence
MEAKAILIGLEAIQRTCIQKRIGLEVESDALSVIKALVGEDDDLSYLKPLIESIVVLSSKLREVSFFHCNRSSNSIAHRLARAASSSIFVGENQENLHLRDSGHVYFGPL
IFPHVFSLFSLRVVGTFLSSE