CuGenDBv2

Gene ID	Lag0032844
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr11:38163304..38164339
RNA-Seq Expression	Lag0032844
Synteny	Lag0032844
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

VVA38592.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]

4.6e-75

42.04

Show/hide

Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        M F   W R VM+C+++V YS L+N +P     P+RGLRQ DPLSPYLFL+CA+                                 DDS V   +   N
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
            K +   YE+ASGQ IN  KS    S N+ +  +     +LG+ R +S   YLG+P  +GRNK      LK++V K LQGW+E   S+ GKEVL+K 
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        +AQ+IP Y M+CF LP  + H+I+++ A+FWWG  GE  + HWM W R+CK K +GG+GFR + AFN AMLAKQ WRL+ NP+S+ S++L+ KYF   NF
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
         EA +GS P   W+     R +   G R+++G+
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]

4.2e-76

43.84

Show/hide

Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        M F   W   VM+CI+SV YSILIN        PSRGLRQ DPLSP LFL+CA+                                 DDS++   +  + 
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
            + +LG YE+ASGQ IN DKS    S N + + ++E   ILG  +     +YLG+P+ IGR+K  V + LK+KV   L GWK  + S+GGKE+LIK+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        +AQAIPTYTM+CF LP  +  D++R+   FWWG   ++ +  W+SW RMC +K  GGLGFR + AFN AMLAKQ+WR++ NPNS++ +VL+ +YF  G+ 
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
        L A +GSSP  +WR      ++  +G RWRVGN
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

XP_024199817.1 uncharacterized protein LOC112203016 [Rosa chinensis]

3.5e-75

39.64

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        + F + W  TVM C++SV YSIL++ +P  +  PSRG+RQ DPLSPYLF++C++                                 DDS++   + R+ 
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
          +FKK+L  YEKASGQ +N +KS  + S N++   +     +LG+   +  ++YLG+P +IG++K A+ + LK+++ K L  WK  + S  GKE+LIK+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        +AQ +P Y MNC+ LP  +  DI +LCA F+WG + ++ R HW SW R+C  K++GG+GF+ I+A+N AMLAKQ WRLI NP+S+++++ + +YF + +F
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
         EA +G SP  +WR    GR     G++WR+G+
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

XP_030502418.1 uncharacterized protein LOC115717574 [Cannabis sativa]

4.2e-76

40.36

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        M F+ +W + +M C+++ R+S L+N +      P+RGLRQ  PLSPYLFL+CA                                  DDSL+   ++  +
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
          + K+VL  Y +ASGQ IN DKSV   S N ++ A+    + L +  +E   +YLG+P+  GR+K  + S +K+++ K++Q W E +FS GG+EVL+K+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        + Q+IPTY M+CFRLP Y  + ++ + + FWWG +    + HW SW+ +CK K +GG+GFR    FNQA+LAKQ+WRL+ NP S+L+ +L+ KYF + +F
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVG
        LEA +G SP  TW+G  WGR+L + G+RW++G
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVG

XP_030942886.1 uncharacterized protein LOC115967872 [Quercus lobata]

1.6e-75

43.84

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        M F+ENW   VM+ ISSV YSI+IN        PSRGLRQ DPLS YLFL+CA+                                 DDSL+   +    
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
            K++L  YE  SGQ IN DKS    S N S + K+E   ILG  +  S  +YLG+P+ IGR+K  V +++KDKV K L GWK  + SLGGKE+LIK+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        +AQA+PTYTM+CF+LP  +  D++++   FWWG   ++ +  W+ W  MCK K QGG+GFR + AFN A+LAKQ+WR++ NPN++++++++ KYF   + 
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
        L A +GSSP  TWR       +   G RWRVGN
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

TrEMBL top hits

e value

%identity

Alignment

A0A803P4U9 Uncharacterized protein

1.1e-79

42.94

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        + + E W   VM C+ SV +SILIN   Q  F P RGLRQ DPLSP+LFL+C++                                 DDSLV L +  + 
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
          + K+VL  Y   SGQ INLDKS     R ++ ++ E     LG+   ++  +YLGMPT +G+NK  +  K++D+V+  LQGWK  +FS  GKE+LIK+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        + QA+P Y M+CFR+   I HDI+ + A+FWWG + +K + HW SW +MCK KE GG+GFR +  FNQA+LAKQ W+++ NP+ +L++VL+  YF + NF
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
        +EA +G      WRG  WGR+L +KG RW +GN
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

A0A803P8L6 Uncharacterized protein

2.7e-81

44.14

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        + + E W   VM C+ SV +SILIN   Q  F P RGLRQ DPLSP+LFL+C++                                 DDSLV L +  + 
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
          + K+VL  Y + SGQ+INL+KS       +S +  E     LG+   ++  +YLGMPT +G+NK  V  K++D+V+  LQGWK  +FS  GKE+LIK+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        I QA+P Y M+CFR+   I H+I+ + A FWWGAS +K + HW SW +MCK KEQGG+GFR++ +FNQA+LAKQ W+++ NP+ +++KVL+  YF + NF
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
        LEA +G      WRG  WGR+L +KG RW +GN
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

A0A803Q1F8 Uncharacterized protein

1.8e-77

42.04

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        +++ E W   VM C+ SV +S+LIN      F P RGLRQ DPLSP+LFL+C++                                 DDSLV L +  + 
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
         ++ K+VL  Y   SGQTINLDKS       +            G+   ++  +YLGMPT +G+NK  V  K++D+V+  LQGWK  +FS  GKE+LIK+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        + QA+P Y M+CFR+   I HDI+ + A+FWWGA+ +  + HW SW +MCK KE GG+GFR +  FNQA+L KQ W+++ NP+ +L++V++  YF + NF
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
         EA +G      WRG  WGRDL +KG RW VGN
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

A0A803QC75 Uncharacterized protein

4.1e-77

40.54

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN
        M F+E W   +M C+++  +S +IN +      PSRGLRQ  PLSPYLFL+C++                                 DDSL+   +  ++
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---------------------------------DDSLVLLGSERKN

Query:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS
          + K+VL  Y KASGQ +NLDKSV   S N ++ A+    + L +   E   +YLG+P+  GR+K  + S +K+++ K++  W E +FS GGKE+L+K+
Subjt:  LESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKS

Query:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF
        + Q+IPTY M+CFRLP Y    ++ + A FWWG +    R HW SW+ +CK+K +GG+GFR    FNQA+LAKQ+WR+   P+S+L ++L+ +YF + NF
Subjt:  IAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNF

Query:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN
        LEA +G SP  TW+G  W R+L +KG+RW+VG+
Subjt:  LEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGN

M5XK32 Reverse transcriptase domain-containing protein (Fragment)

4.8e-78

45.87

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Query:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---DDSLVLLGSERKNLESFKKVLGWYEKASGQTINLDKSVFITSR
        M F   W R VM+C+++V YS L+N +P     P+RGLRQ DPLSPYLFL+CA+    DS V   +   N    K +   YE+ASG+ IN  KS    S 
Subjt:  MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD---DDSLVLLGSERKNLESFKKVLGWYEKASGQTINLDKSVFITSR

Query:  NLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKF
        N+ +  +     +LG+ R +S   YLG+P  +GRNK      LK++V K LQGW+E   S+ GKEVL+K +AQ+IP Y MNCF LP  + H+I+++ A+F
Subjt:  NLSIQAKEECGKILGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKF

Query:  WWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLEAPIGSSPLATWRGNCWGRDLFVKGIRWR
        WWG  GE  + HWM W R+CK K +GG+GFR + AFN AMLAKQ WRL+ NP+S+ S++L+ KYF   NF EA +GS P   W+     R +   G R++
Subjt:  WWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLEAPIGSSPLATWRGNCWGRDLFVKGIRWR

Query:  VGN
        +G+
Subjt:  VGN

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.0e-24

32.6

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Query:  MPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGG
        MP    R       ++ ++V   + GW+E   S  G+  L K++  ++P ++M+   LP  I + +D+L   F WG++ EK + H + WS++C  K++GG
Subjt:  MPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGG

Query:  LGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKY----FKDGNFLEAPIGSSPLATWRGNCWG-RDLFVKGIRWRVGN
        LG R   + N+A+++K  WRL++  NS+ + VL+ KY     +D  +L  P GS   +TWR    G RD+   G+ W  G+
Subjt:  LGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKY----FKDGNFLEAPIGSSPLATWRGNCWG-RDLFVKGIRWRVGN

P92555 Uncharacterized mitochondrial protein AtMg01250

4.4e-04

62.5

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Query:  LINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD
        +IN  PQ    PSRGLRQ DPLSPYLF++C +
Subjt:  LINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD

P93295 Uncharacterized mitochondrial protein AtMg00310

2.2e-27

39.69

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Query:  AIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKE-QGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLE
        A+P Y M+CFRL   +   +     +FWW +   K +  W++W ++CK+KE  GGLGFR +  FNQA+LAKQS+R+I  P+++LS++LR +YF   + +E
Subjt:  AIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKE-QGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLE

Query:  APIGSSPLATWRGNCWGRDLFVKGIRWRVGN
          +G+ P   WR    GR+L  +G+   +G+
Subjt:  APIGSSPLATWRGNCWGRDLFVKGIRWRVGN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

4.5e-12

27.83

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Query:  QYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNK
        +YLG+P    +   +    L +K++  +  W     S  G+  LI S+  ++  + M+ FRLP+    +ID +C+ F W       +   ++WS +C  K
Subjt:  QYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNK

Query:  EQGGLGFRQIFAFNQ
        ++GGLG R +   N+
Subjt:  EQGGLGFRQIFAFNQ

AT4G29090.1 Ribonuclease H-like superfamily protein

1.1e-26

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Query:  AIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLEA
        A+PTYTM CF LP  +   I  + A FWW    E    HW +W  +   K +GG+GF+ I AFN A+L KQ WR++  P S+++KV + +YF   + L A
Subjt:  AIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKEQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLEA

Query:  PIGSSPLATWRGNCWGRDLFVKGIRWRVGN
        P+GS P   W+     +++  +G R  VGN
Subjt:  PIGSSPLATWRGNCWGRDLFVKGIRWRVGN

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.6e-28

39.69

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Query:  AIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKE-QGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLE
        A+P Y M+CFRL   +   +     +FWW +   K +  W++W ++CK+KE  GGLGFR +  FNQA+LAKQS+R+I  P+++LS++LR +YF   + +E
Subjt:  AIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNKE-QGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLE

Query:  APIGSSPLATWRGNCWGRDLFVKGIRWRVGN
          +G+ P   WR    GR+L  +G+   +G+
Subjt:  APIGSSPLATWRGNCWGRDLFVKGIRWRVGN

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)

3.2e-05

62.5

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Query:  LINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD
        +IN  PQ    PSRGLRQ DPLSPYLF++C +
Subjt:  LINEQPQEEFRPSRGLRQDDPLSPYLFLVCAD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACTTTAGTGAAAATTGGACGAGAACAGTGATGGAGTGTATATCCTCGGTGAGATACTCTATCCTGATCAATGAGCAACCTCAGGAGGAATTCAGACCGAGTAGAGG
TCTAAGACAGGACGACCCCCTCTCTCCTTACCTCTTTCTTGTGTGCGCAGATGATGACAGTTTGGTGCTCCTGGGATCGGAAAGAAAGAACCTGGAATCTTTTAAAAAAG
TGCTGGGGTGGTACGAGAAGGCCTCGGGGCAGACAATTAACCTCGACAAGTCAGTTTTTATCACAAGCAGGAACTTAAGTATCCAAGCCAAGGAAGAATGTGGAAAAATC
CTTGGTATCGGGAGGACAGAGTCCCTGAACCAGTACTTAGGAATGCCTACTCAGATAGGACGGAACAAAGGAGCTGTTCTCTCGAAGCTGAAGGATAAAGTGAAAAAAAT
TCTTCAAGGATGGAAAGAAAATATGTTCTCATTAGGGGGAAAAGAAGTGCTTATTAAATCGATAGCACAAGCGATTCCAACCTATACCATGAACTGTTTCAGGCTCCCTA
ACTACATTTTTCATGACATTGATAGGTTATGCGCGAAATTCTGGTGGGGAGCATCGGGGGAGAAAGACAGGCACCACTGGATGAGTTGGAGTAGGATGTGCAAGAATAAA
GAGCAAGGAGGATTGGGCTTTAGACAAATCTTTGCTTTCAATCAAGCAATGCTTGCGAAGCAAAGTTGGAGACTGATCCGAAATCCCAATAGCATCCTCTCAAAGGTCCT
AAGGGGAAAATACTTTAAGGATGGAAACTTCCTTGAAGCTCCTATCGGGTCTTCTCCCTTGGCAACTTGGAGAGGTAACTGCTGGGGGCGTGACTTGTTCGTGAAGGGCA
TTCGATGGCGAGTGGGGAACGAGAATTGA

mRNA sequence

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Protein sequence

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MNFSENWTRTVMECISSVRYSILINEQPQEEFRPSRGLRQDDPLSPYLFLVCADDDSLVLLGSERKNLESFKKVLGWYEKASGQTINLDKSVFITSRNLSIQAKEECGKI
LGIGRTESLNQYLGMPTQIGRNKGAVLSKLKDKVKKILQGWKENMFSLGGKEVLIKSIAQAIPTYTMNCFRLPNYIFHDIDRLCAKFWWGASGEKDRHHWMSWSRMCKNK
EQGGLGFRQIFAFNQAMLAKQSWRLIRNPNSILSKVLRGKYFKDGNFLEAPIGSSPLATWRGNCWGRDLFVKGIRWRVGNEN

Lag0032844 (gene) of Sponge gourd (AG-4) v1 genome