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Lag0032869 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032869
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:38352254..38352992
RNA-Seq ExpressionLag0032869
SyntenyLag0032869
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KHN28139.1 hypothetical protein glysoja_023957, partial [Glycine soja]4.2e-0441.67Show/hide
Query:  NKVLFLPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLMGDVASS
        + + F+ RQGNR+AH+LASL+F Y D+ W++E P ++  ++  +V S+
Subjt:  NKVLFLPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLMGDVASS

XP_021716820.1 uncharacterized protein LOC110684687 [Chenopodium quinoa]6.5e-0546.03Show/hide
Query:  MDDVRMVLHPWDNNKVLFLPRQGNRVAHALASLAFSYVD-RVWLEEGPSEISDVLMGDVASSF
        ++D+  +     +    F+ R GN  AHALA L+ SY D RVW+EE PSEIS  +M D+AS+F
Subjt:  MDDVRMVLHPWDNNKVLFLPRQGNRVAHALASLAFSYVD-RVWLEEGPSEISDVLMGDVASSF

XP_021722108.1 uncharacterized protein LOC110689646 [Chenopodium quinoa]1.4e-0460.87Show/hide
Query:  FLPRQGNRVAHALASLAFSYVD-RVWLEEGPSEISDVLMGDVASSF
        F+ R GN  AHALA L+ SY D RVW+EE PSEIS  +M D+AS+F
Subjt:  FLPRQGNRVAHALASLAFSYVD-RVWLEEGPSEISDVLMGDVASSF

XP_042964529.1 uncharacterized protein LOC122298728 [Carya illinoinensis]5.5e-0445.31Show/hide
Query:  MDDVRMVLHPWDNNKVLFLPRQGNRVAHALASLAFSY-VDRVWLEEGPSEISDVLMGDVASSFC
        M++VR  L   ++ K+ F+ R+ N VAH LA  AF+Y  +RVW+EEGP EI  VL  +    FC
Subjt:  MDDVRMVLHPWDNNKVLFLPRQGNRVAHALASLAFSY-VDRVWLEEGPSEISDVLMGDVASSFC

TrEMBL top hitse value%identityAlignment
A0A0B2R7K0 RNase H domain-containing protein (Fragment)2.0e-0441.67Show/hide
Query:  NKVLFLPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLMGDVASS
        + + F+ RQGNR+AH+LASL+F Y D+ W++E P ++  ++  +V S+
Subjt:  NKVLFLPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLMGDVASS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGTGCGAATGGTCCTCCATCCTTGGGACAACAACAAAGTTTTGTTTTTGCCTCGTCAGGGAAACAGGGTGGCACATGCTCTGGCTAGCTTGGCATTTTCTTA
TGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGAGATTTCTGATGTCCTGATGGGTGATGTTGCTTCATCTTTTTGTGCTGTTCTTTTGCCTGGGATTGAGGTGTTAG
CTGGTGGCATAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGTGCGAATGGTCCTCCATCCTTGGGACAACAACAAAGTTTTGTTTTTGCCTCGTCAGGGAAACAGGGTGGCACATGCTCTGGCTAGCTTGGCATTTTCTTA
TGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGAGATTTCTGATGTCCTGATGGGTGATGTTGCTTCATCTTTTTGTGCTGTTCTTTTGCCTGGGATTGAGGTGTTAG
CTGGTGGCATAATCTGA
Protein sequenceShow/hide protein sequence
MDDVRMVLHPWDNNKVLFLPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLMGDVASSFCAVLLPGIEVLAGGII