; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032906 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032906
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr11:38800124..38803576
RNA-Seq ExpressionLag0032906
SyntenyLag0032906
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6734224.1 hypothetical protein FQA47_013229 [Oryzias melastigma]9.1e-0930.04Show/hide
Query:  QEDQQANKPIQQIIKPTGRSKRSSTNRPIQEIIKSTDRSSRRINKLTSR-SNKSTSQQADHPGRSTSQQVDPR------DHHANRPIIQEDQQANRPIQE
        + DQQ NKP  Q    T R     TNRP         + +++ NK T+R +N+ T+QQ D P    +++   R      D   N+P    +QQ N+P  +
Subjt:  QEDQQANKPIQQIIKPTGRSKRSSTNRPIQEIIKSTDRSSRRINKLTSR-SNKSTSQQADHPGRSTSQQVDPR------DHHANRPIIQEDQQANRPIQE

Query:  IINLTDRSSRKINKPTSRSKRSSRQQADHPRRSTNR-SRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRSNRSSSQQADPRDQQANRPIKK
              ++++  N+ T+R K+ + +Q + P++ TNR + R T+QQ D P +QQ ++P K  ++     +R+ NK T   NR +++   P ++Q NRP   
Subjt:  IINLTDRSSRKINKPTSRSKRSSRQQADHPRRSTNR-SRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRSNRSSSQQADPRDQQANRPIKK

Query:  INKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANKPIQEIIKPTGRSKRSS
         N+   R + + T++PT+++++Q +RP  + D+Q N+   +  KPT R  + +
Subjt:  INKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANKPIQEIIKPTGRSKRSS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATATTTTTTCAAAATAACCGAACCAAACCATTGGATCGGTTTGGTTCGGTTCGGTTTGTCGGTTTTTCGATTTTTGCTTGCACCCCTCGAACTGGCAACTCAAC
AGCTGATGCGATTGCAAAATTTGCGAGATGTGAGAAAAGTTCTATAATCTGGAATATGGATGTTCCTGATTGGATTCATGTGTTGGCAATTTTGGACCACCCCGATATAC
AAGGAGCTGACGAGGACAACCGGAGAGAAATCGGGCTGAAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACAGGCCAAGACCGAAGGGGTCGGGTTTTTGGTCCGA
CCCCCTACTCGGCCTCGGCCCATGGCCGAGGCCGACCCTTGGCCCACTCGCGCGGGCCGAGTCCGTTCGGTGCCGTTTGGTCCCCACCGCCTTTGGCCGCCTCGGTTTCG
CCTGAGGAGGCCACCATTCATTCATGGGGGAGTCGGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATCCATAGTCGTCAGAATCCAAAGAGTC
CAGAGAATTCAGAGATCCGAGATTCAAAATTCAAAGGACTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAGGATATCAACAAGCCAACCGACCGATCAAGAA
GATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCAACAGGCC
GATCCAGGAGATCATCAAGTCAACAGACCGATCATCCAGGAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGTCAACAGGCCGATCATCCAGGAAGATCAA
CAAGCCAACAAGTCGATCCAAGAGATCACCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCA
TCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAACCGATCAAGAAGATCAACAAGTCAGCAGGC
CGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCTAACAAGCCGATCCAACAGATCAT
CAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAA
GAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAATAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCATATTTTTTCAAAATAACCGAACCAAACCATTGGATCGGTTTGGTTCGGTTCGGTTTGTCGGTTTTTCGATTTTTGCTTGCACCCCTCGAACTGGCAACTCAAC
AGCTGATGCGATTGCAAAATTTGCGAGATGTGAGAAAAGTTCTATAATCTGGAATATGGATGTTCCTGATTGGATTCATGTGTTGGCAATTTTGGACCACCCCGATATAC
AAGGAGCTGACGAGGACAACCGGAGAGAAATCGGGCTGAAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACAGGCCAAGACCGAAGGGGTCGGGTTTTTGGTCCGA
CCCCCTACTCGGCCTCGGCCCATGGCCGAGGCCGACCCTTGGCCCACTCGCGCGGGCCGAGTCCGTTCGGTGCCGTTTGGTCCCCACCGCCTTTGGCCGCCTCGGTTTCG
CCTGAGGAGGCCACCATTCATTCATGGGGGAGTCGGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATCCATAGTCGTCAGAATCCAAAGAGTC
CAGAGAATTCAGAGATCCGAGATTCAAAATTCAAAGGACTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAGGATATCAACAAGCCAACCGACCGATCAAGAA
GATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCAACAGGCC
GATCCAGGAGATCATCAAGTCAACAGACCGATCATCCAGGAGGATCAACAAGCTAACAAGTCGATCCAACAAATCAACAAGTCAACAGGCCGATCATCCAGGAAGATCAA
CAAGCCAACAAGTCGATCCAAGAGATCACCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCA
TCCAGGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCACGCCAACAGGCCGATCATCCAAGAAGATCAACAAACCGATCAAGAAGATCAACAAGTCAGCAGGC
CGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCTAACAAGCCGATCCAACAGATCAT
CAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAA
GAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAATAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAG
Protein sequenceShow/hide protein sequence
MSIFFQNNRTKPLDRFGSVRFVGFSIFACTPRTGNSTADAIAKFARCEKSSIIWNMDVPDWIHVLAILDHPDIQGADEDNRREIGLKDGPRRQNRQVGQAKTEGVGFLVR
PPTRPRPMAEADPWPTRAGRVRSVPFGPHRLWPPRFRLRRPPFIHGGVGFSQRQRGQSPEHSPKIHSRQNPKSPENSEIRDSKFKGLKTQKIGRLEDSKRISTSQPTDQE
DQQVSRPIIQEDQQANKPIQQIIKPTGRSKRSSTNRPIQEIIKSTDRSSRRINKLTSRSNKSTSQQADHPGRSTSQQVDPRDHHANRPIIQEDQQANRPIQEIINLTDRS
SRKINKPTSRSKRSSRQQADHPRRSTNRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSRKINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQ
EDQQVSRPIIQEDQQANKPIQEIIKPTGRSKRSST