| GenBank top hits | e value | %identity | Alignment |
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| PRQ16242.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis] | 1.0e-34 | 30.92 | Show/hide |
Query: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFS-CEDKYLWHYDKCGIYSVKSGYKFF----IRNKIRAGS
++ D W+P FK ++ ++ VS+ IS +G WN EL+ + + ++ I IP+ + C DK +WHY K G Y+VKSGY+ IR + GS
Subjt: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFS-CEDKYLWHYDKCGIYSVKSGYKFF----IRNKIRAGS
Query: SSNSMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNS
S+N ++ VW +WK+KIP VK F W+ I+ +PT + L R + C RC E+ H C KA+E+W+L + NF D + S
Subjt: SSNSMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNS
Query: VLSMEDLQKFAVACWAIWSDRN----------------------------------NARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSS
VL++ +L + C IW RN +A+ V+W P K+N+D A + GLG V RN +
Subjt: VLSMEDLQKFAVACWAIWSDRN----------------------------------NARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSS
Query: GDLL
GDLL
Subjt: GDLL
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| VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis] | 6.9e-36 | 30.32 | Show/hide |
Query: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIR-AGSSSN
++ D WLP FK ++ V + SG WN+ LLK+ ++++ +IP+ + + D +WHY++ G+YSVKSGY+ K + +G S
Subjt: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIR-AGSSSN
Query: SME---KVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNS
++ K W +W +KIP K+K F W+ F+P L+NR I CP C++ ES H + CE AKE+W + ++F + W L
Subjt: SME---KVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNS
Query: VLSMEDLQKFAVACWAIWSDRN--------------------------NARNRAISVK------------WQPPPEGIWKINIDAACKLGEEGSGLGLVC
S E+ FA CW +W+ RN NA N + ++ W+PPP GI+KIN+D A K G+ G+G+V
Subjt: VLSMEDLQKFAVACWAIWSDRN--------------------------NARNRAISVK------------WQPPPEGIWKINIDAACKLGEEGSGLGLVC
Query: RNSSGDLLGA
RN++G+ + A
Subjt: RNSSGDLLGA
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| XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis] | 1.6e-37 | 31.02 | Show/hide |
Query: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFI-RNKIRAGSSSN
++ D W+P+ F+ K + + V+ I W ++ L++ KED+E I +I + + ED+ LWH+DK G YSVKSGY+ + +N SSN
Subjt: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFI-RNKIRAGSSSN
Query: SMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVLS
S ++W W + +P KVK F W+A+ +PT NL+ R + C RC +E+ H+LI C+ A++IW+L V D N +F E+ S S
Subjt: SMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVLS
Query: MEDLQKFAVACWAIWSDRN-----------------------------------NARNRAI-SVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSG
+ + V CW IWS RN A++R I KW+PP + + K+N+DAA ++ GLG + R++ G
Subjt: MEDLQKFAVACWAIWSDRN-----------------------------------NARNRAI-SVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSG
Query: DLL
+L
Subjt: DLL
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| XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia] | 1.5e-38 | 31.07 | Show/hide |
Query: FNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIRAGS-SSNS
F+DPWLP+ FK D V+ FI+ G W++ + + ED ++I +PI +++ +D +LWHYDK G YSV+SGYK ++ K A S S+N
Subjt: FNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIRAGS-SSNS
Query: MEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHV-LLRADFNHNFADRWFELNSVLS
W ++WK+ +P K+K F W++ + IPT NL RGI C C ES H C++A++IW + + L A+ N +F + W L L
Subjt: MEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHV-LLRADFNHNFADRWFELNSVLS
Query: MEDLQKFAVACWAIWSDRNN-------------------------------------ARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSS
+DL A+ W IW+DRN+ + +R + W+P K+N DAAC+ + G + R+SS
Subjt: MEDLQKFAVACWAIWSDRNN-------------------------------------ARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSS
Query: GDLLGASAI
L+ A++I
Subjt: GDLLGASAI
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| XP_041026997.1 uncharacterized protein LOC121267211 [Juglans microcarpa x Juglans regia] | 2.0e-35 | 30.82 | Show/hide |
Query: MFNDPWLPK----EIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPIN-FSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIRAGS
++ D W+P+ +IQ C+ EV DK G W E++KE N+ + EII R+PI+ DK +W K GI++VKS Y F ++ + R
Subjt: MFNDPWLPK----EIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPIN-FSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIRAGS
Query: SSNSM---EKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFE
S+ + +K W+++W++KIP K F WKA+N +PTR NLY R + + NCP CN+ E+ H L C+ A ++W + V + +F W +
Subjt: SSNSM---EKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFE
Query: LNSVLSMEDLQKFAVACWAIWSDRN---------------------------------NARNRAIS--VKWQPPPEGIWKINIDAACKLGEEGSGLGLVC
+ LSMEDL+ A+ IW RN N AI KW+ P EG+ K+N+DAA + +G+VC
Subjt: LNSVLSMEDLQKFAVACWAIWSDRN---------------------------------NARNRAIS--VKWQPPPEGIWKINIDAACKLGEEGSGLGLVC
Query: RNSSGDLLGASAIYFGNDFPLPWRNYWRLWR
R+ GD+L ++ + N LW+
Subjt: RNSSGDLLGASAIYFGNDFPLPWRNYWRLWR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S8ACU2 Ribonuclease H-like superfamily protein | 1.7e-35 | 31.7 | Show/hide |
Query: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFSCE-DKYLWHYDKCGIYSVKSGYKFFIRNKIRA-GSSSN
++ W+P+ FK + D V+ I + W L+++ N ED E+I RI + S + D+ LWHYDK G YSVKSGY+ +R K A SSS+
Subjt: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFSCE-DKYLWHYDKCGIYSVKSGYKFFIRNKIRA-GSSSN
Query: SMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVLS
S W +W +++P K+K F WKA F+PT NL+ R + + CPRC E +H ++ C+ AK++W+L ++ N + EL + S
Subjt: SMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVLS
Query: MEDLQKFAVACWAIWSDRN---------------------------------NARNRAI---SVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSG
++L+ CW W RN A +AI KW PPP+G +K N+DAA + GLG+V R+ SG
Subjt: MEDLQKFAVACWAIWSDRN---------------------------------NARNRAI---SVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSG
Query: DLLGAS
++ A+
Subjt: DLLGAS
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| A0A5E4FZN9 PREDICTED: retrotransposon | 3.3e-36 | 30.32 | Show/hide |
Query: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIR-AGSSSN
++ D WLP FK ++ V + SG WN+ LLK+ ++++ +IP+ + + D +WHY++ G+YSVKSGY+ K + +G S
Subjt: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIR-AGSSSN
Query: SME---KVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNS
++ K W +W +KIP K+K F W+ F+P L+NR I CP C++ ES H + CE AKE+W + ++F + W L
Subjt: SME---KVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNS
Query: VLSMEDLQKFAVACWAIWSDRN--------------------------NARNRAISVK------------WQPPPEGIWKINIDAACKLGEEGSGLGLVC
S E+ FA CW +W+ RN NA N + ++ W+PPP GI+KIN+D A K G+ G+G+V
Subjt: VLSMEDLQKFAVACWAIWSDRN--------------------------NARNRAISVK------------WQPPPEGIWKINIDAACKLGEEGSGLGLVC
Query: RNSSGDLLGA
RN++G+ + A
Subjt: RNSSGDLLGA
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| A0A6J1DX30 uncharacterized protein LOC111024874 | 7.2e-39 | 31.07 | Show/hide |
Query: FNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIRAGS-SSNS
F+DPWLP+ FK D V+ FI+ G W++ + + ED ++I +PI +++ +D +LWHYDK G YSV+SGYK ++ K A S S+N
Subjt: FNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPI-NFSCEDKYLWHYDKCGIYSVKSGYKFFIRNKIRAGS-SSNS
Query: MEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHV-LLRADFNHNFADRWFELNSVLS
W ++WK+ +P K+K F W++ + IPT NL RGI C C ES H C++A++IW + + L A+ N +F + W L L
Subjt: MEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHV-LLRADFNHNFADRWFELNSVLS
Query: MEDLQKFAVACWAIWSDRNN-------------------------------------ARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSS
+DL A+ W IW+DRN+ + +R + W+P K+N DAAC+ + G + R+SS
Subjt: MEDLQKFAVACWAIWSDRNN-------------------------------------ARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSS
Query: GDLLGASAI
L+ A++I
Subjt: GDLLGASAI
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| A0A803P9P5 Uncharacterized protein | 1.3e-35 | 28.62 | Show/hide |
Query: NDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFSCE-DKYLWHYDKCGIYSVKSGYKFFIR--NKIRAGSSSNS
+DPWLP FK K KVS I+ WN LL++ + D+ I+ IP+ + D+ +W+++ G+YSVKSGY R ++ A SS+NS
Subjt: NDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFSCE-DKYLWHYDKCGIYSVKSGYKFFIR--NKIRAGSSSNS
Query: MEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVLSM
++ W W + +P+K+K F W+A++ +P L++R I C C++ IES+ H L C++ ++IW+L + N + D ++ + S
Subjt: MEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVLSM
Query: EDLQKFAVACWAIWSDRN-----------------------------------------NARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCR
+ +++FA W+IW++RN R++ + W PP G K+N DAA E SG G + R
Subjt: EDLQKFAVACWAIWSDRN-----------------------------------------NARNRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCR
Query: NSSGDLLGASAIYFGNDF
N +GD++ A A+ F F
Subjt: NSSGDLLGASAIYFGNDF
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| A0A803QE56 Uncharacterized protein | 1.5e-36 | 31.07 | Show/hide |
Query: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIP-INFSCEDKYLWHYDKCGIYSVKSGYKFFIR-NKIRAGSSSN
+ DPWLP+ FK V V P+G W+ E ++ N+ED +II ++P + EDK +WHY K G YSVKSGY + K S+
Subjt: MFNDPWLPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIP-INFSCEDKYLWHYDKCGIYSVKSGYKFFIR-NKIRAGSSSN
Query: SMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRC-NKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVL
M W +WK+K+P KVKHF WK N ++PT L +RG+ +D C RC N E+ H L RC K++W+ ++ + + + ++
Subjt: SMEKVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRC-NKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHNFADRWFELNSVL
Query: SMEDLQKFAVACWAIWSDRNNARNRAISVK------W------------------------QPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSGDLLGA
E + F V W +W RNN ++ I K W + P G+WKIN+DA K G SG+ V ++SSG + A
Subjt: SMEDLQKFAVACWAIWSDRNNARNRAISVK------W------------------------QPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSGDLLGA
Query: SAIYFGNDF
S+ ++
Subjt: SAIYFGNDF
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 7.9e-06 | 27.27 | Show/hide |
Query: YKFFIRNKIRAGSSSNSMEKVWANL-------------WKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIW
Y + + +K+ G SS K WA L W K W +PT+ L + G+Q+ C C+ +IE DH+ + CE A +W
Subjt: YKFFIRNKIRAGSSSNSMEKVWANL-------------WKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIW
Query: ELILNHVLLRADFNH---NFADRWFELNSVLSMEDLQKFAV--ACWAIWSDRNN
+ + L A F+ N W + S L+K V +AIW RNN
Subjt: ELILNHVLLRADFNH---NFADRWFELNSVLSMEDLQKFAV--ACWAIWSDRNN
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| AT2G02650.1 Ribonuclease H-like superfamily protein | 1.1e-12 | 24.04 | Show/hide |
Query: LWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWE----LILNHVLLRADFNHNFADRWFELNSVLSMEDL
+WK+ + K+KHF W+ + G + T L +R I D C RC E+ HI+ C + +W +I N + F N +R +L+ + L
Subjt: LWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWE----LILNHVLLRADFNHNFADRWFELNSVLSMEDL
Query: QKFAV--ACWAIWSDRN--------------------------NAR-----------------NRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVC
+F W +W RN NA +R S +W PPPEG K N D+ G + G
Subjt: QKFAV--ACWAIWSDRN--------------------------NAR-----------------NRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVC
Query: RNSSGDLL
R +G ++
Subjt: RNSSGDLL
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| AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 6.1e-06 | 22.47 | Show/hide |
Query: RGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHN-FADRWFELNSVLSMEDLQKFA----VACWAIWSDRNNAR-----------
R + + +C RC + E+ +H+L +C A+ +W + ++ + +A+ ++ LN + + L K W +W RN
Subjt: RGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELILNHVLLRADFNHN-FADRWFELNSVLSMEDLQKFA----VACWAIWSDRNNAR-----------
Query: --------------------------NRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSGDLL--GASAI
R +SV+W+ PP K N DA +L G+G + RN SG +L GA A+
Subjt: --------------------------NRAISVKWQPPPEGIWKINIDAACKLGEEGSGLGLVCRNSSGDLL--GASAI
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| AT3G09510.1 Ribonuclease H-like superfamily protein | 1.5e-20 | 29.46 | Show/hide |
Query: LPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFSCE-DKYLWHYDKCGIYSVKSGYKFFIRN---KIRAGSSSNSMEK
L E +K I + ++K S++ W+ + + V++ D I RI + S + DK +W+Y+ G Y+V+SGY + I A + +
Subjt: LPKEIQFKSSCIKEVMADKKVSFFISPSGGWNLELLKEAVNKEDLEIIRRIPINFSCE-DKYLWHYDKCGIYSVKSGYKFFIRN---KIRAGSSSNSMEK
Query: VWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWEL----ILNHVLLRADFNHNFADRWFELNSV--
+ +W + I K+KHF W+A++ + T L RG+++D +CPRC++ ES +H L C A W L ++ + L+ DF N ++ LN V
Subjt: VWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWEL----ILNHVLLRADFNHNFADRWFELNSV--
Query: LSMEDLQKFAVA--CWAIWSDRNN
+M D K W IW RNN
Subjt: LSMEDLQKFAVA--CWAIWSDRNN
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| AT3G25270.1 Ribonuclease H-like superfamily protein | 3.9e-13 | 31.06 | Show/hide |
Query: KVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELI-LNHVLLRADFNHNFADRWFELNSVLSME
++ A +WK+K K+KHF WK ++G + T NL R I+ C RC + E+S H+ C A+++W + H LR L+S L+
Subjt: KVWANLWKVKIPAKVKHFCWKAINGFIPTRVNLYNRGIQMDVNCPRCNKNIESSDHILIRCEKAKEIWELI-LNHVLLRADFNHNFADRWFELNSVLSME
Query: DLQKFAVA---CWAIWSDRNNARNRAISVKWQ
Q F +A W +W RN + S+ WQ
Subjt: DLQKFAVA---CWAIWSDRNNARNRAISVKWQ
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