; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032931 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032931
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCarotenoid cleavage dioxygenase 1
Genome locationchr11:38998127..38998435
RNA-Seq ExpressionLag0032931
SyntenyLag0032931
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019684 - photosynthesis, light reaction (biological process)
GO:0009536 - plastid (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0051213 - dioxygenase activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PLY97343.1 hypothetical protein LSAT_4X145420 [Lactuca sativa]1.4e-1974.67Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF VGVLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
PPD74579.1 hypothetical protein GOBAR_DD28494 [Gossypium barbadense]1.4e-1974.67Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF VGVLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
QHO53328.1 uncharacterized protein DS421_2g46980 [Arachis hypogaea]5.5e-2176Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAFVVGVLSDLYAFHRSTENSLCPY+        N C LC+T  AGTKLADAYSLDTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
RWR98208.1 putative cytochrome c biosynthesis protein [Cinnamomum micranthum f. kanehirae]3.2e-2180.6Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYYNTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQ AF VGVLSDLYAFHRST NSLCPY+N CILC+TA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYYNTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
THG12292.1 hypothetical protein TEA_001479 [Camellia sinensis var. sinensis]1.4e-1974.67Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF VGVLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
TrEMBL top hitse value%identityAlignment
A0A2J6MCN3 Uncharacterized protein6.6e-2074.67Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF VGVLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
A0A3S3N968 Putative cytochrome c biosynthesis protein1.6e-2180.6Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYYNTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQ AF VGVLSDLYAFHRST NSLCPY+N CILC+TA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYYNTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
A0A438FJ74 Reverse transcriptase3.3e-1973.33Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF V VLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
A0A4S4E889 Uncharacterized protein6.6e-2074.67Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF VGVLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEVHDP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
A0A6L2P7F0 Carotenoid cleavage dioxygenase 13.3e-1973.33Show/hide
Query:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
        +S QQSAF VGVLSDLYAFHRST NSLCPY+        N CILCITA AGT+LADAYS DTV ASS GKEV+DP
Subjt:  MSTQQSAFVVGVLSDLYAFHRSTENSLCPYY--------NTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCCAGCAGAGTGCTTTCGTCGTTGGTGTTCTTTCTGATCTCTACGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACTATAACACTTGCATCCTCTG
TATTACTGCGACTGCTGGCACAAAGTTAGCCGATGCTTATTCCTTAGATACCGTCACTGCTTCTTCTTCGGGAAAAGAAGTTCACGACCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCCAGCAGAGTGCTTTCGTCGTTGGTGTTCTTTCTGATCTCTACGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACTATAACACTTGCATCCTCTG
TATTACTGCGACTGCTGGCACAAAGTTAGCCGATGCTTATTCCTTAGATACCGTCACTGCTTCTTCTTCGGGAAAAGAAGTTCACGACCCGTAG
Protein sequenceShow/hide protein sequence
MSTQQSAFVVGVLSDLYAFHRSTENSLCPYYNTCILCITATAGTKLADAYSLDTVTASSSGKEVHDP