; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0032944 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032944
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:39073211..39073858
RNA-Seq ExpressionLag0032944
SyntenyLag0032944
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]1.1e-1432.93Show/hide
Query:  WARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGKAMVA
        WA W DRN   HG  + +  +R  WI  Y +++     Q+   +RI    +S+   S  RW PP     K+NSD AC +    T + +I RD  G  +VA
Subjt:  WARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGKAMVA

Query:  ASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSF
         S  L + L     ++  ILE ++LA S   + LVVESDCQ AI  +     +  +    ++ +W F
Subjt:  ASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.5e-1629.41Show/hide
Query:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC
        ++L L  +  W  W+DRN  +HG+++   + + +W+  +L+S  +    S+   R +SN   +       W P +    KLN+D AC    A TS   I 
Subjt:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC

Query:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI
        RD     + A S  +   L   + ++  ILEG++ A + + ++L VESD  +AI  I     T  D +  V+ I +       ISF  + R CNR  H +
Subjt:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI

Query:  ARYG
        A++G
Subjt:  ARYG

XP_023872411.1 uncharacterized protein LOC111985024 [Quercus suber]1.9e-1429.29Show/hide
Query:  IVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEG
        ++V+ WA WS+RN+C +G    S Q   +   +YLE+++   ++  S ++           +  +W+PP+ + +K+N D A   E  M  + ++ RD EG
Subjt:  IVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEG

Query:  KAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEIARY
        + + A SR L+  L A   +  A+  G+  A  M   +  +ESD    IN +  + P  S   ALV S  +  H  R + F    R  NR  H +AR+
Subjt:  KAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEIARY

XP_023906534.1 uncharacterized protein LOC112018253 [Quercus suber]2.0e-1625.84Show/hide
Query:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC
        E++GL+V   W  W++RN+  HG     + + ++W ++YLE +   N +      +R    S+ ++    W  P   ++K+N D A   +     I ++ 
Subjt:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC

Query:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI
        RD  G  + A S+ L   L A  T+  A+ E +  A++M   + V +SD QI  N +  +    S    ++    S LH  R + F   P + N+  H +
Subjt:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI

Query:  ARYGKSLNN
        A+Y + +++
Subjt:  ARYGKSLNN

XP_030931239.1 uncharacterized protein LOC115957159 [Quercus lobata]1.3e-1525.84Show/hide
Query:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC
        E++GL+V+  W  W++ N+  HG     + IR++W ++YLE +   N +    R       S+ ++    W  P   ++K N D A   +     I ++ 
Subjt:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC

Query:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI
        RD  G  + A S+     L A   +  A+ E +  A++M   + V ESD QI +N +  +    S    ++  + S LH  R + F   P + N+  H +
Subjt:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI

Query:  ARYGKSLNN
        A+Y + +++
Subjt:  ARYGKSLNN

TrEMBL top hitse value%identityAlignment
A0A0J8BAU9 Uncharacterized protein4.3e-1226.7Show/hide
Query:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC
        E   + V+  W  W  RN+ +    + S+ +  +   D L   R+ N   S R  ++         + +RW  P+  F K+N D A + E     + M+ 
Subjt:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC

Query:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI
        RD  G+ + A SR++     A   +  A+L     A +   SN+V+ESD Q+ IN IN       D +A++  + + +     I F F  R CN   H +
Subjt:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI

Query:  ARYGKS
        A++  S
Subjt:  ARYGKS

A0A5C7IFK3 RNase H domain-containing protein2.5e-1228.04Show/hide
Query:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC
        E L   ++  W  W++RN+ + G++         W   + ++   L+   +  R  ++N ++L S     WSPP+    K+N D A        S  ++ 
Subjt:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC

Query:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI
        RD  G+ + AA+     R    I +  AI EGI LA +    +L +ESD    +   N    T +D   ++  I   L   R IS  + PRSCN   HE+
Subjt:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI

Query:  ARYGKSLNNNEFGY
        AR    L N+   Y
Subjt:  ARYGKSLNNNEFGY

A0A6J1BQ49 uncharacterized protein LOC1110047865.4e-1532.93Show/hide
Query:  WARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGKAMVA
        WA W DRN   HG  + +  +R  WI  Y +++     Q+   +RI    +S+   S  RW PP     K+NSD AC +    T + +I RD  G  +VA
Subjt:  WARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGKAMVA

Query:  ASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSF
         S  L + L     ++  ILE ++LA S   + LVVESDCQ AI  +     +  +    ++ +W F
Subjt:  ASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSF

A0A6J1DX30 uncharacterized protein LOC1110248742.2e-1629.41Show/hide
Query:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC
        ++L L  +  W  W+DRN  +HG+++   + + +W+  +L+S  +    S+   R +SN   +       W P +    KLN+D AC    A TS   I 
Subjt:  ENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMIC

Query:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI
        RD     + A S  +   L   + ++  ILEG++ A + + ++L VESD  +AI  I     T  D +  V+ I +       ISF  + R CNR  H +
Subjt:  RDFEGKAMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEI

Query:  ARYG
        A++G
Subjt:  ARYG

A0A803PWX1 Uncharacterized protein1.6e-1127.69Show/hide
Query:  VVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGK
        ++L W  W  RN   HG   P +     W   +L  FR  N      +R              +W+PP R  +K+N D        +  +  + RD EG+
Subjt:  VVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGK

Query:  AMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEIA
         MVAA+R ++ +      +L AIL GI+     +  +  VESDC  A+N + K      D   L+  I   L   R     F  R  N+  H +A
Subjt:  AMVAASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCTAGGCTTAATAGTTGTTTTGTGTTGGGCTAGATGGAGCGATAGAAACAAGTGCGTTCATGGTGAAGAAATTCCATCCTCTCAAATTCGGAGCAAATGGAT
AAGAGATTACCTCGAATCCTTCCGGCGCCTCAACGATCAGTCCTCGTCTAGAAGGCGAATCAGAAGCAACGATGCCTCCCTTTCTTCGATCAGTTTCAATCGTTGGTCTC
CCCCAAATCGTGATTTTTGGAAACTAAACTCTGATGATGCATGTTCGAATGAAGTGGCGATGACAAGTATCAGGATGATTTGCAGAGATTTCGAGGGTAAAGCGATGGTG
GCTGCGTCAAGATCTTTGGATGTGAGATTGGAGGCCCATATTACTAAGTTATGGGCCATACTTGAGGGAATAAGGCTGGCCTACTCGATGGACTGCTCAAATTTGGTTGT
GGAGTCAGATTGTCAAATTGCCATAAATTTCATCAACAAGGTCTTTCCAACTTGGTCAGATTCTAAGGCATTAGTTGTGTCCATCTGGAGCTTTTTGCATTTGTTAAGGG
ATATCTCTTTTATTTTTGCTCCTAGATCTTGCAATAGGACTACCCATGAGATTGCTAGATATGGGAAATCCCTAAACAATAATGAATTTGGGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACCTAGGCTTAATAGTTGTTTTGTGTTGGGCTAGATGGAGCGATAGAAACAAGTGCGTTCATGGTGAAGAAATTCCATCCTCTCAAATTCGGAGCAAATGGAT
AAGAGATTACCTCGAATCCTTCCGGCGCCTCAACGATCAGTCCTCGTCTAGAAGGCGAATCAGAAGCAACGATGCCTCCCTTTCTTCGATCAGTTTCAATCGTTGGTCTC
CCCCAAATCGTGATTTTTGGAAACTAAACTCTGATGATGCATGTTCGAATGAAGTGGCGATGACAAGTATCAGGATGATTTGCAGAGATTTCGAGGGTAAAGCGATGGTG
GCTGCGTCAAGATCTTTGGATGTGAGATTGGAGGCCCATATTACTAAGTTATGGGCCATACTTGAGGGAATAAGGCTGGCCTACTCGATGGACTGCTCAAATTTGGTTGT
GGAGTCAGATTGTCAAATTGCCATAAATTTCATCAACAAGGTCTTTCCAACTTGGTCAGATTCTAAGGCATTAGTTGTGTCCATCTGGAGCTTTTTGCATTTGTTAAGGG
ATATCTCTTTTATTTTTGCTCCTAGATCTTGCAATAGGACTACCCATGAGATTGCTAGATATGGGAAATCCCTAAACAATAATGAATTTGGGTATTAA
Protein sequenceShow/hide protein sequence
MENLGLIVVLCWARWSDRNKCVHGEEIPSSQIRSKWIRDYLESFRRLNDQSSSRRRIRSNDASLSSISFNRWSPPNRDFWKLNSDDACSNEVAMTSIRMICRDFEGKAMV
AASRSLDVRLEAHITKLWAILEGIRLAYSMDCSNLVVESDCQIAINFINKVFPTWSDSKALVVSIWSFLHLLRDISFIFAPRSCNRTTHEIARYGKSLNNNEFGY