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Lag0032953 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032953
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:39154771..39156062
RNA-Seq ExpressionLag0032953
SyntenyLag0032953
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023902012.1 uncharacterized protein LOC112013864 [Quercus suber]1.6e-0738.14Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSA
        FH DHGH T EC  L+ +IE LIR+G  K F+G D     L A   +    PL EI+ ILGGSS       G+   S++ Y+ A+ ++    ++ +A
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSA

XP_023921045.1 uncharacterized protein LOC112032513 [Quercus suber]7.3e-0839.18Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSA
        FH DHGH T EC  L+ +IE LIR+G  K F+G D     L A   +    PL EI+ ILGGSS       G+   S++ Y+ A+ ++    ++ SA
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSA

XP_030924962.1 uncharacterized protein LOC115951997 [Quercus lobata]6.2e-0736Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSALGD
        FH DHGH T EC  L+ +IE+LIR+G  + F+G D     L     +    PL EI+ I+GGSS        +   SR+ Y+ A+   + +A+    L D
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSALGD

XP_030939989.1 uncharacterized protein LOC115964901 [Quercus lobata]4.7e-0740.24Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYV
        FH DHGH T EC  L+ +IE LIR+   + F+G D   + L    G+    PL EI+ I+GGSS       G+  MS++ Y+
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYV

XP_030958405.1 uncharacterized protein LOC115980276 [Quercus lobata]8.1e-0737.23Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQA
        FH DHGH T EC  L+ +IE LIR+G  K FVG D +   L     +    PL EI+ I+GG+        G+   S++ Y+ A+ N+    +A
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQA

TrEMBL top hitse value%identityAlignment
A0A2N9ERC7 Reverse transcriptase2.5e-0635.23Show/hide
Query:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNI
        FH DHGH T EC+ L++++EALIR+G  + +V      +            P+ EI+TI+GG      A+ G  + SR+ Y   + NI
Subjt:  FHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNI

A0A6J1DQL9 uncharacterized protein LOC1110229052.5e-0643.94Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V +       +   G+   +P  EIQTI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSE

A0A6J1DV51 uncharacterized protein LOC1110246624.3e-0646.97Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V  D    L   +  K   +P+ EIQTI GG +E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSE

A0A6J1DXQ6 uncharacterized protein LOC1110255494.3e-0643.94Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSE
        +FH DHGHAT++C  L++E+E LIR GY K +V     +    A  G+   +P  EI+TI+GG  E
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSE

A0A6J1DZ52 uncharacterized protein LOC1110256127.4e-0643.28Show/hide
Query:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEE
        +FH DHGHAT +C  L++E+E LIR+GY K +V +D+       ++     +P  EI+TI+GGS+E+
Subjt:  MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAT
AAGCAAGAGGCTACTGCTGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTTGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAACGCATGGCG
AGCAAAAAATGTCGAGGGAATGTTACGTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATAGCCGAGGCCGAGCCTTTGAGGGGTCA
AGCTATCCCCTTCCAATGAAATCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAAAGGAATAGGAGTTGGTCGGCCTCATGCCAAGGCCGA
GGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAACTTGAAGAGAGGCTTGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGA
GTGTACGCACCCCTGGGATGACTATGCAGCTTGAAGAGAGGCTTGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACC
ACGCTTGAAGAGAGGCCTGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGACGCTTGAAGAGAGGCCCTGGGAAAT
TCCTAGGCCTCCCCAAGCTTTTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCACGGAGACCACGGTCATGCAACCCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAT
AAGCAAGAGGCTACTGCTGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTTGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAACGCATGGCG
AGCAAAAAATGTCGAGGGAATGTTACGTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATAGCCGAGGCCGAGCCTTTGAGGGGTCA
AGCTATCCCCTTCCAATGAAATCGCTTGCAGAGAGACTCGGGAGATTCCCAGGCCTCCCAAAGCTTTTCCCCAAAGGAATAGGAGTTGGTCGGCCTCATGCCAAGGCCGA
GGCCGACCACCTAGAGGCTAAGGCCAAACACCACCTTCAAGAGCTCGGTCACGAACTTGAAGAGAGGCTTGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGA
GTGTACGCACCCCTGGGATGACTATGCAGCTTGAAGAGAGGCTTGGGAAATTCCCAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACC
ACGCTTGAAGAGAGGCCTGGGAAATTCCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGACGCTTGAAGAGAGGCCCTGGGAAAT
TCCTAGGCCTCCCCAAGCTTTTCCCTAG
Protein sequenceShow/hide protein sequence
MFHGDHGHATRECIQLRDEIEALIREGYPKGFVGNDISKRLLLADQGKGGANPLFEIQTILGGSSEEGGATHGEQKMSRECYVMALGNIDRKAQATSALGDSRGRAFEGS
SYPLPMKSLAERLGRFPGLPKLFPKGIGVGRPHAKAEADHLEAKAKHHLQELGHELEERLGKFPGLPKLFPQKSVRTPGMTMQLEERLGKFPGLPKLFPQKSVRTPGMTT
TLEERPGKFLGLPKLFPQKSVRTPGMTTTLEERPWEIPRPPQAFP