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Lag0032957 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032957
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:39183755..39184339
RNA-Seq ExpressionLag0032957
SyntenyLag0032957
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]4.4e-1833.5Show/hide
Query:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVK-NSKPIMRFEESWIKL
        M  FQ  +++C L D G+   CFTW   +     + ERLDR+F N     L P +KV + +FL+SDHRPIVA+  + N  +  + + K   RFE  W+K 
Subjt:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVK-NSKPIMRFEESWIKL

Query:  KDAKKVIEDCWEN-----QNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESND-QKWEEIIKAETDLEDLLEEEEDYWRIRLR
         + +++I   W +      N    ++       C ++L +WNK++  GSL + +   + +L  L + S    + EE+ + E  L DLL  EE YW+IR R
Subjt:  KDAKKVIEDCWEN-----QNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESND-QKWEEIIKAETDLEDLLEEEEDYWRIRLR

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]3.0e-2737.89Show/hide
Query:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASW-DIRNEIKAVKNSKPIMRFEESWIKL
        M++F++ ++ C L+D G+    FTW  G      I ERLDRF IN A+  +   +++ HL FL+SDHRPI+A W  +       +  +   RFEE W   
Subjt:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASW-DIRNEIKAVKNSKPIMRFEESWIKL

Query:  KDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWR
        ++ K+++   W  Q       F  KI  C+ +L  WN  RL GSL+ AI  KEVE+Q++  +      + + +A+ DLE LLEEEE YWR
Subjt:  KDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWR

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.6e-1844.62Show/hide
Query:  ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWN
        ERLDRF IN +M      +KV HL  LSSDHRPI+ASWD         + +  +RFEESW+++   + +I   W +  G G   F AKI  C+++L+ WN
Subjt:  ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWN

Query:  KNRLKGSLKKAIAAKEVELQKLYAESNDQK
        K RL  SLK AIA KE EL++L     D +
Subjt:  KNRLKGSLKKAIAAKEVELQKLYAESNDQK

XP_023876230.1 uncharacterized protein LOC111988681 [Quercus suber]1.7e-1734.69Show/hide
Query:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLK
        MRSF+E IN+C L D GY  S FTW R   +   + ERLDR F++ A   + P +K+HH+   +SDH  +V     +   +A + SK + RFE  W+K +
Subjt:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLK

Query:  DAKKVIEDCWENQNGGGAVN-FNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQ-KWEEIIKAETDLEDLLEEEEDYWRIRLRD
           + + + WE   G G  + F+  +  C   L  WNKN   G + K I+A + +LQ L    + +   EE+ +   +L  +L  EED W  R R+
Subjt:  DAKKVIEDCWENQNGGGAVN-FNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQ-KWEEIIKAETDLEDLLEEEEDYWRIRLRD

XP_030498017.1 uncharacterized protein LOC115713672 [Cannabis sativa]4.4e-1833.33Show/hide
Query:  FQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKA-VKNSKPIMRFEESWIKLKDA
        FQ+ ++ C L+D G+   CFTW   +  +  + ERLDR+F N     L P +KV + +F+ SDHRPIVA   + N +++   ++K   RFE  W+K  + 
Subjt:  FQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKA-VKNSKPIMRFEESWIKLKDA

Query:  KKVIEDCWENQNGGGAVNFNAKIL----RCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESN-DQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD
          ++   W + +  G ++    IL    RC ++L  WNK++  GS+ K +   + +L  L + S    + +E+ + E  L DLL  EE YW++R R D
Subjt:  KKVIEDCWENQNGGGAVNFNAKIL----RCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESN-DQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224231.5e-2737.89Show/hide
Query:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASW-DIRNEIKAVKNSKPIMRFEESWIKL
        M++F++ ++ C L+D G+    FTW  G      I ERLDRF IN A+  +   +++ HL FL+SDHRPI+A W  +       +  +   RFEE W   
Subjt:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASW-DIRNEIKAVKNSKPIMRFEESWIKL

Query:  KDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWR
        ++ K+++   W  Q       F  KI  C+ +L  WN  RL GSL+ AI  KEVE+Q++  +      + + +A+ DLE LLEEEE YWR
Subjt:  KDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWR

A0A6J1DUG8 uncharacterized protein LOC1110241351.2e-1844.62Show/hide
Query:  ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWN
        ERLDRF IN +M      +KV HL  LSSDHRPI+ASWD         + +  +RFEESW+++   + +I   W +  G G   F AKI  C+++L+ WN
Subjt:  ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWN

Query:  KNRLKGSLKKAIAAKEVELQKLYAESNDQK
        K RL  SLK AIA KE EL++L     D +
Subjt:  KNRLKGSLKKAIAAKEVELQKLYAESNDQK

A0A7J6GL46 CCHC-type domain-containing protein2.1e-1833.5Show/hide
Query:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVK-NSKPIMRFEESWIKL
        M  FQ  +++C L D G+   CFTW   +     + ERLDR+F N     L P +KV + +FL+SDHRPIVA+  + N  +  + + K   RFE  W+K 
Subjt:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVK-NSKPIMRFEESWIKL

Query:  KDAKKVIEDCWEN-----QNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESND-QKWEEIIKAETDLEDLLEEEEDYWRIRLR
         + +++I   W +      N    ++       C ++L +WNK++  GSL + +   + +L  L + S    + EE+ + E  L DLL  EE YW+IR R
Subjt:  KDAKKVIEDCWEN-----QNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESND-QKWEEIIKAETDLEDLLEEEEDYWRIRLR

A0A803Q8J4 Uncharacterized protein2.0e-1629.95Show/hide
Query:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLK
        M +F+  I+ C LI+  ++   FTW + +     + ERLD  FIN           V HL++  SDHR +++  ++++   AV+  +   RFE+ W+K  
Subjt:  MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLK

Query:  DAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESN--DQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD
        +  ++I  CW   +G      N  + +C+  L  W+K++  G+LK  I+  +  +  L   S      ++++ KAE  L+DLL  EE YW+ R R D
Subjt:  DAKKVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESN--DQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD

A0A803QHU6 Uncharacterized protein1.2e-1632.99Show/hide
Query:  FQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAK
        F+EV++ C L    +    +TW +G+   N I ERLD  F N         +   HL++ SSDHR I  +       K     K    FE+ W++  +A 
Subjt:  FQEVINKCKLIDAGYSESCFTWRRGKTKSNQI-ERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAK

Query:  KVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAI--AAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD
         +I DCW + + GG   F   +  C   L  W+ ++  GS KK I  A  +V L    A +  Q   ++ K+E+ L+DLLE+EE YW  R R D
Subjt:  KVIEDCWENQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAI--AAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCGTTTCAGGAGGTTATTAACAAATGTAAATTGATTGATGCAGGGTACTCGGAGAGTTGTTTTACTTGGAGAAGAGGTAAAACGAAGAGCAATCAGATTGAGAG
ACTTGATCGTTTCTTCATAAATCTCGCAATGCCAATTCTAAACCCGATAATTAAAGTGCATCACCTAAATTTTCTCAGCTCGGATCACAGGCCCATAGTTGCGAGTTGGG
ATATTAGAAACGAGATAAAAGCAGTCAAGAACTCCAAGCCAATTATGAGATTTGAAGAGAGTTGGATCAAGCTCAAGGATGCCAAAAAAGTCATTGAAGATTGCTGGGAA
AATCAGAATGGAGGTGGGGCTGTAAACTTCAATGCTAAAATCCTGCGGTGTATCAATAAGTTGCACATTTGGAACAAAAATCGGCTGAAAGGAAGCCTCAAAAAGGCCAT
TGCAGCGAAAGAAGTAGAATTACAGAAGCTGTATGCTGAGAGCAATGATCAGAAATGGGAGGAAATCATTAAAGCTGAAACCGACCTTGAGGATCTACTGGAAGAAGAAG
AAGATTATTGGAGAATTCGATTGAGAGATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCGTTTCAGGAGGTTATTAACAAATGTAAATTGATTGATGCAGGGTACTCGGAGAGTTGTTTTACTTGGAGAAGAGGTAAAACGAAGAGCAATCAGATTGAGAG
ACTTGATCGTTTCTTCATAAATCTCGCAATGCCAATTCTAAACCCGATAATTAAAGTGCATCACCTAAATTTTCTCAGCTCGGATCACAGGCCCATAGTTGCGAGTTGGG
ATATTAGAAACGAGATAAAAGCAGTCAAGAACTCCAAGCCAATTATGAGATTTGAAGAGAGTTGGATCAAGCTCAAGGATGCCAAAAAAGTCATTGAAGATTGCTGGGAA
AATCAGAATGGAGGTGGGGCTGTAAACTTCAATGCTAAAATCCTGCGGTGTATCAATAAGTTGCACATTTGGAACAAAAATCGGCTGAAAGGAAGCCTCAAAAAGGCCAT
TGCAGCGAAAGAAGTAGAATTACAGAAGCTGTATGCTGAGAGCAATGATCAGAAATGGGAGGAAATCATTAAAGCTGAAACCGACCTTGAGGATCTACTGGAAGAAGAAG
AAGATTATTGGAGAATTCGATTGAGAGATGACTGA
Protein sequenceShow/hide protein sequence
MRSFQEVINKCKLIDAGYSESCFTWRRGKTKSNQIERLDRFFINLAMPILNPIIKVHHLNFLSSDHRPIVASWDIRNEIKAVKNSKPIMRFEESWIKLKDAKKVIEDCWE
NQNGGGAVNFNAKILRCINKLHIWNKNRLKGSLKKAIAAKEVELQKLYAESNDQKWEEIIKAETDLEDLLEEEEDYWRIRLRDD