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Lag0032987 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032987
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L37a
Genome locationchr11:39542678..39546651
RNA-Seq ExpressionLag0032987
SyntenyLag0032987
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009536 - plastid (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD4982632.1 hypothetical protein E3N88_19303 [Mikania micrantha]1.9e-3680.18Show/hide
Query:  SSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS
        S SG  VF         FTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS
Subjt:  SSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS

Query:  TIRRLREQTES
        TIRRLREQTES
Subjt:  TIRRLREQTES

KAG6571778.1 SNF2 domain-containing protein CLASSY 3, partial [Cucurbita argyrosperma subsp. sororia]3.7e-4080.33Show/hide
Query:  SLVQVLHTFTKSSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYT
        SLVQVL TFTKSS GD+V   A         TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYT
Subjt:  SLVQVLHTFTKSSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYT

Query:  LNTASAVTVRSTIRRLREQTES
        LNTASAVTVRSTIRRLREQTES
Subjt:  LNTASAVTVRSTIRRLREQTES

KOM32511.1 hypothetical protein LR48_Vigan01g206700 [Vigna angularis]1.6e-3587.5Show/hide
Query:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +LF QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

VVA26227.1 PREDICTED: 60S ribosomal [Prunus dulcis]9.5e-3688.42Show/hide
Query:  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +F+QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

XP_006644519.1 60S ribosomal protein L37a-1 isoform X1 [Oryza brachyantha]9.5e-3687.37Show/hide
Query:  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +FTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

TrEMBL top hitse value%identityAlignment
A0A0L9TPW5 Uncharacterized protein7.9e-3687.5Show/hide
Query:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +LF QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A0S3R5C2 Uncharacterized protein7.9e-3687.5Show/hide
Query:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +LF QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A4Y7LGM0 Uncharacterized protein1.3e-3587.5Show/hide
Query:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        LL  QTKRTKKAGIVGKYGTRYGASLRKQIKKME+SQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A5E4FEE5 PREDICTED: 60S ribosomal4.6e-3688.42Show/hide
Query:  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +F+QTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A5N6NQU4 Uncharacterized protein9.3e-3780.18Show/hide
Query:  SSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS
        S SG  VF         FTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS
Subjt:  SSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS

Query:  TIRRLREQTES
        TIRRLREQTES
Subjt:  TIRRLREQTES

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-11.5e-3687.91Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-21.5e-3687.91Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-13.8e-3585.71Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYF        +KRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a3.4e-3689.01Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF        +KRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a9.9e-3687.78Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+F        +KRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein2.7e-3685.71Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYF        +KRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein1.0e-3585.39Show/hide
Query:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYF        +KRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYF--------LKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCTCCTCCCTCTTGTATTTTTTTTTAAAAAAAGAAAAGAAGAAAAATGGTGTAAGAGAGAAGAAGAAAGGAGAAGAAAAACAAATTACCCGGCGGCCGGCCGG
CGACGGCGAGCGGTGGCCGACAGCTGGCGCCGACCGCCGGAGATTTGAAGAAGAAGATGGAGGGGAAAATTTCAATTCTAGGGTTTCTCTGGTTCAAGTTCTTCACACTT
TCACCAAATCTTCTTCCGGAGATCTTGTGTTCCAAGCAGCAATGACTGATGAATTGCTTTTTACTCAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGT
ACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTTGAAGAGGAAGGCAGTCGGAATTTGGGGTTGCAAAGATTG
TGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCTCCTCCCTCTTGTATTTTTTTTTAAAAAAAGAAAAGAAGAAAAATGGTGTAAGAGAGAAGAAGAAAGGAGAAGAAAAACAAATTACCCGGCGGCCGGCCGG
CGACGGCGAGCGGTGGCCGACAGCTGGCGCCGACCGCCGGAGATTTGAAGAAGAAGATGGAGGGGAAAATTTCAATTCTAGGGTTTCTCTGGTTCAAGTTCTTCACACTT
TCACCAAATCTTCTTCCGGAGATCTTGTGTTCCAAGCAGCAATGACTGATGAATTGCTTTTTACTCAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGT
ACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTTGAAGAGGAAGGCAGTCGGAATTTGGGGTTGCAAAGATTG
TGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA
Protein sequenceShow/hide protein sequence
MDPSSLLYFFLKKEKKKNGVREKKKGEEKQITRRPAGDGERWPTAGADRRRFEEEDGGENFNSRVSLVQVLHTFTKSSSGDLVFQAAMTDELLFTQTKRTKKAGIVGKYG
TRYGASLRKQIKKMEVSQHSKYFLKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES