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Lag0032993 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0032993
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:39666913..39667314
RNA-Seq ExpressionLag0032993
SyntenyLag0032993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83738.1 hypothetical protein VITISV_014440 [Vitis vinifera]4.0e-2343.9Show/hide
Query:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS
        +++ A  LGC+   L   YLG PLG + +  S W+ + ER RR+L  W+R  ISKGGR+TL +  L S+ +Y+ SL++  KS+ K +EK+ RDF+W GGS
Subjt:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS

Query:  YKPGANLVKWEWFALPINHGGLG
         +  A+L+KW+    P   GGLG
Subjt:  YKPGANLVKWEWFALPINHGGLG

KAA0041036.1 putative plant SNARE 11 [Cucumis melo var. makuwa]2.4e-2349.59Show/hide
Query:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS
        +  + N LGC  + L  NYLGF +GG   RK  W  L ERFR K+D WR   +SKGGR+TL Q VLNSL  Y FSLL+     I  MEK+  DFV   GS
Subjt:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS

Query:  YKPGANLVKWEWFALPINHGGLG
         K  ++LVK +    PI +GGLG
Subjt:  YKPGANLVKWEWFALPINHGGLG

RVW33721.1 putative ribonuclease H protein [Vitis vinifera]2.4e-2343.9Show/hide
Query:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS
        +++ A  LGC+   L   YLG PLG + +  S W+ + ER RR+L  W+R  ISKGGR+TL +  L S+ +Y+ SL++  KS+ K +EK+ RDF+W GGS
Subjt:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS

Query:  YKPGANLVKWEWFALPINHGGLG
         +  A+L+KW+    P   GGLG
Subjt:  YKPGANLVKWEWFALPINHGGLG

RVX11981.1 putative ribonuclease H protein [Vitis vinifera]1.1e-2344.72Show/hide
Query:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS
        +++ A  LGC+   L I YLG PLG + +  S W+ + ER RR+L  W+R  ISKGGR+TL +  L S+ +Y+ SL++  KS+ K +EK+ RDF+W GGS
Subjt:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS

Query:  YKPGANLVKWEWFALPINHGGLG
         +  A+L+KW+    P   GGLG
Subjt:  YKPGANLVKWEWFALPINHGGLG

TYK19487.1 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis melo var. makuwa]8.1e-2443.7Show/hide
Query:  WANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKP
        WA+ +GC    L  NYLG PLGGN R  S W+ + E+  ++L  W++   SKGGR+TL + VL+ + +YYFSL K   S+ K ++K+ RDF+W G  +  
Subjt:  WANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKP

Query:  GANLVKWEWFALPINHGGL
        G+ LV W+    P+N GGL
Subjt:  GANLVKWEWFALPINHGGL

TrEMBL top hitse value%identityAlignment
A0A2N9HUI8 Uncharacterized protein3.9e-2443.9Show/hide
Query:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS
        + D A  LGC+  PL + YLG PLG  F+ KS W P++ER  ++L  W+R  +SKGG+VTL +  L+SL  Y+ SL      +   +EK+ RDF+WNG  
Subjt:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS

Query:  YKPGANLVKWEWFALPINHGGLG
         +   +LV W     PI HGGLG
Subjt:  YKPGANLVKWEWFALPINHGGLG

A0A438JSP9 Putative ribonuclease H protein5.1e-2444.72Show/hide
Query:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS
        +++ A  LGC+   L I YLG PLG + +  S W+ + ER RR+L  W+R  ISKGGR+TL +  L S+ +Y+ SL++  KS+ K +EK+ RDF+W GGS
Subjt:  MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGS

Query:  YKPGANLVKWEWFALPINHGGLG
         +  A+L+KW+    P   GGLG
Subjt:  YKPGANLVKWEWFALPINHGGLG

A0A5D3D7E5 NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X13.9e-2443.7Show/hide
Query:  WANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKP
        WA+ +GC    L  NYLG PLGGN R  S W+ + E+  ++L  W++   SKGGR+TL + VL+ + +YYFSL K   S+ K ++K+ RDF+W G  +  
Subjt:  WANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKP

Query:  GANLVKWEWFALPINHGGL
        G+ LV W+    P+N GGL
Subjt:  GANLVKWEWFALPINHGGL

A0A803P465 Uncharacterized protein1.6e-2547.06Show/hide
Query:  ANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPG
        A  +GC+     + YLG PLGG+ R+ SFWEP++++  ++LD W+   +SKGGR+TL Q VL+SL LY+ SL KA +S+ KA+EK+ RDF+W G     G
Subjt:  ANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPG

Query:  ANLVKWEWFALPINHGGLG
         +LV W+    P + GGLG
Subjt:  ANLVKWEWFALPINHGGLG

A0A803P8A0 Uncharacterized protein1.4e-2445.76Show/hide
Query:  ANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPG
        AN +GC+     + YLG PLGG+ R+K+FWEP+L++  +++D W+   +S+GGR+TL Q VL+SL +YY SL K  K ++K +EK+ RDF W GG    G
Subjt:  ANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPG

Query:  ANLVKWEWFALPINHGGL
         +LV W+    P   GGL
Subjt:  ANLVKWEWFALPINHGGL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.4e-0932.26Show/hide
Query:  KSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPGANLVKWEWFALPINHGGLG
        K  +  +LER   ++  WR   +S  GR+TL + VL+S+ ++  S +   +SI+  +++++R F+W   + K   +LVKW     P   GGLG
Subjt:  KSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPGANLVKWEWFALPINHGGLG

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-1029.36Show/hide
Query:  LTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPGANLVKWEWFA
        L + YLG PL       S + PL+E+ R ++  W    +S  GR+ L   V++SL  ++ S  +   + IK ++ +   F+W+G         V W    
Subjt:  LTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPGANLVKWEWFA

Query:  LPINHGGLG
         P + GGLG
Subjt:  LPINHGGLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATTGGGCTAATCACCTCGGCTGCCAAACTGAACCCCTGACTATAAATTATTTGGGTTTTCCCCTTGGAGGTAATTTTCGGAGAAAATCTTTCTGGGAGCCGTT
ATTAGAGAGATTTAGAAGAAAGCTTGATGTTTGGAGGAGATTCCCCATTTCTAAAGGGGGTAGAGTCACTTTAGCCCAATTCGTCCTCAATAGCCTTCTTCTTTATTACT
TTTCTCTCCTAAAAGCTCATAAGTCTATCATCAAGGCTATGGAAAAAGTGACCAGAGATTTTGTTTGGAACGGGGGTAGCTACAAGCCTGGTGCAAATTTGGTTAAATGG
GAGTGGTTTGCTTTGCCCATTAATCACGGTGGACTGGGGTGGGATCCTTGGAGCAAAGAAACACTTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGATTGGGCTAATCACCTCGGCTGCCAAACTGAACCCCTGACTATAAATTATTTGGGTTTTCCCCTTGGAGGTAATTTTCGGAGAAAATCTTTCTGGGAGCCGTT
ATTAGAGAGATTTAGAAGAAAGCTTGATGTTTGGAGGAGATTCCCCATTTCTAAAGGGGGTAGAGTCACTTTAGCCCAATTCGTCCTCAATAGCCTTCTTCTTTATTACT
TTTCTCTCCTAAAAGCTCATAAGTCTATCATCAAGGCTATGGAAAAAGTGACCAGAGATTTTGTTTGGAACGGGGGTAGCTACAAGCCTGGTGCAAATTTGGTTAAATGG
GAGTGGTTTGCTTTGCCCATTAATCACGGTGGACTGGGGTGGGATCCTTGGAGCAAAGAAACACTTCTCTGA
Protein sequenceShow/hide protein sequence
MKDWANHLGCQTEPLTINYLGFPLGGNFRRKSFWEPLLERFRRKLDVWRRFPISKGGRVTLAQFVLNSLLLYYFSLLKAHKSIIKAMEKVTRDFVWNGGSYKPGANLVKW
EWFALPINHGGLGWDPWSKETLL