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Lag0033011 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033011
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationchr11:39929302..39930335
RNA-Seq ExpressionLag0033011
SyntenyLag0033011
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150170.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus]1.5e-4976.52Show/hide
Query:  ADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIG
        A L  CL M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSL+++S DSW+NATKFLTGAS VGSIAIPVILKHA IIG
Subjt:  ADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIG

Query:  WGALALDLSSLIVFVVAIFCYLWMSNEDDYNI
        WGA+A+DLSS +VFVVAI C++ MS +DDY++
Subjt:  WGALALDLSSLIVFVVAIFCYLWMSNEDDYNI

XP_008448742.1 PREDICTED: vacuolar protein sorting-associated protein 55 homolog [Cucumis melo]7.3e-4977.95Show/hide
Query:  CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA
        CL M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSL+++S DSW+NATKFLTGAS VGSIAIPVILKHA IIGWGA+A
Subjt:  CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA

Query:  LDLSSLIVFVVAIFCYLWMSNEDDYNI
        +DLSS +VFVVAI C++ MS +DDY++
Subjt:  LDLSSLIVFVVAIFCYLWMSNEDDYNI

XP_021599879.1 vacuolar protein sorting-associated protein 55 homolog [Manihot esculenta]1.3e-4875.36Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      CL   K+  L ILVSGGI+LQ LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSLFSES +SWVNATKFLTGASAVGSIAIP ILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLIVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M++ED Y+IL
Subjt:  ADIIGWGALALDLSSLIVFVVAIFCYLWMSNEDDYNIL

XP_022155500.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]5.6e-4974.63Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      C  M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFF GSDSSSL++ES DSW+NATKFLTGAS +GSIAIP+ILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLIVFVVAIFCYLWMSNEDD
        A IIGWGALA+DLSS +VFV+AI C+LWM+ +DD
Subjt:  ADIIGWGALALDLSSLIVFVVAIFCYLWMSNEDD

XP_022157395.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]2.1e-5988.81Show/hide
Query:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII
        MADLG C HMSK+VTLG+LVSGGIVLQFLAC LY NWWPLLSV+MY+LLPMPLLFFAGSD+SSL SESGDSWVNATKFLTGAS VGSIAIPVILKHA+II
Subjt:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII

Query:  GWGALALDLSSLIVFVVAIFCYLWMSNEDDYNIL
        GWGALALDLSSL+VFVVAI CYLWMSNEDDYN L
Subjt:  GWGALALDLSSLIVFVVAIFCYLWMSNEDDYNIL

TrEMBL top hitse value%identityAlignment
A0A0A0L5B3 Uncharacterized protein7.2e-5076.52Show/hide
Query:  ADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIG
        A L  CL M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSL+++S DSW+NATKFLTGAS VGSIAIPVILKHA IIG
Subjt:  ADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIG

Query:  WGALALDLSSLIVFVVAIFCYLWMSNEDDYNI
        WGA+A+DLSS +VFVVAI C++ MS +DDY++
Subjt:  WGALALDLSSLIVFVVAIFCYLWMSNEDDYNI

A0A1S3BJT4 vacuolar protein sorting-associated protein 55 homolog3.6e-4977.95Show/hide
Query:  CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA
        CL M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSL+++S DSW+NATKFLTGAS VGSIAIPVILKHA IIGWGA+A
Subjt:  CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA

Query:  LDLSSLIVFVVAIFCYLWMSNEDDYNI
        +DLSS +VFVVAI C++ MS +DDY++
Subjt:  LDLSSLIVFVVAIFCYLWMSNEDDYNI

A0A5D3CIX3 Vacuolar protein sorting-associated protein 55-like protein3.6e-4977.95Show/hide
Query:  CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA
        CL M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSL+++S DSW+NATKFLTGAS VGSIAIPVILKHA IIGWGA+A
Subjt:  CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA

Query:  LDLSSLIVFVVAIFCYLWMSNEDDYNI
        +DLSS +VFVVAI C++ MS +DDY++
Subjt:  LDLSSLIVFVVAIFCYLWMSNEDDYNI

A0A6J1DML0 vacuolar protein sorting-associated protein 55 homolog2.7e-4974.63Show/hide
Query:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      C  M KV  L ILVSGGIV+Q LACALYNNWWP+LSV+MYVLLPMPLLFF GSDSSSL++ES DSW+NATKFLTGAS +GSIAIP+ILKH
Subjt:  MADLGN----CLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLIVFVVAIFCYLWMSNEDD
        A IIGWGALA+DLSS +VFV+AI C+LWM+ +DD
Subjt:  ADIIGWGALALDLSSLIVFVVAIFCYLWMSNEDD

A0A6J1DSZ0 vacuolar protein sorting-associated protein 55 homolog1.0e-5988.81Show/hide
Query:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII
        MADLG C HMSK+VTLG+LVSGGIVLQFLAC LY NWWPLLSV+MY+LLPMPLLFFAGSD+SSL SESGDSWVNATKFLTGAS VGSIAIPVILKHA+II
Subjt:  MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII

Query:  GWGALALDLSSLIVFVVAIFCYLWMSNEDDYNIL
        GWGALALDLSSL+VFVVAI CYLWMSNEDDYN L
Subjt:  GWGALALDLSSLIVFVVAIFCYLWMSNEDDYNIL

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 554.5e-0928.91Show/hide
Query:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGS--DSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA
        ++K+++L   ++ G +L  L+CAL++N++PL  +++++L P+P  +F AG+   +S   S+S ++  +   FLTG      IA+PV+  H  +IG  +  
Subjt:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGS--DSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALA

Query:  LDLSSLIVFVVAIFCYLWM----SNEDD
        + +   ++   +I  + W      NEDD
Subjt:  LDLSSLIVFVVAIFCYLWM----SNEDD

Q32PD8 Leptin receptor overlapping transcript-like 12.1e-0629.91Show/hide
Query:  GIVLQFLACAL--YNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATK----FLTGASAVGSIAIPVILKHADIIGWGALALDLS-SLIVF
        G++   L CAL  YN +WPL  +  Y+L P+P         +    +  D+  NA K    FLT    V +  +P++   A++I WGA AL L+ + ++F
Subjt:  GIVLQFLACAL--YNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATK----FLTGASAVGSIAIPVILKHADIIGWGALALDLS-SLIVF

Query:  VVAIFCYLWMSNEDDYN
           +  +L   + DD++
Subjt:  VVAIFCYLWMSNEDDYN

Q54VP1 Vacuolar protein sorting-associated protein 55 homolog1.5e-0731.86Show/hide
Query:  GIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDLSSLIVFVVAIFCY
        G++   LAC + ++ +P++ V  Y L P P +     DS   FS    ++ +   FLTG       AIP+IL H+DII   ALA  ++  +     I  +
Subjt:  GIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDLSSLIVFVVAIFCY

Query:  LWM---SNEDDYN
        LW     N++D N
Subjt:  LWM---SNEDDYN

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog3.9e-4571.65Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLIVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLIVFVVAIFCYLWMSNEDD

Q9UUH1 Vacuolar protein sorting-associated protein 551.7e-0827.2Show/hide
Query:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALD
        + K++ L  +++ G +L  L+CAL+ NW+PLL V+ ++L P+P LL    S S     E   + ++  +F  GA+     A+P++  +  +IG  A  + 
Subjt:  MSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALD

Query:  L--SSLIVFVVAIFCYLWMSNEDDY
            S+I  V+ ++   ++ +E+++
Subjt:  L--SSLIVFVVAIFCYLWMSNEDDY

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein2.8e-4671.65Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLIVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLIVFVVAIFCYLWMSNEDD

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein2.8e-4671.65Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLIVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLIVFVVAIFCYLWMSNEDD

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein2.8e-4671.65Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLIVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLIVFVVAIFCYLWMSNEDD

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein2.8e-4671.65Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLIVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLIVFVVAIFCYLWMSNEDD

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein2.8e-4671.65Show/hide
Query:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL M K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLIVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLIVFVVAIFCYLWMSNEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTTGGGAAACTGCTTGCATATGAGCAAAGTTGTAACGCTAGGAATCTTGGTTTCTGGAGGAATTGTGTTACAGTTTTTGGCATGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGCGTGGTCATGTATGTTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCTGATAGTTCTTCGCTATTTTCCGAATCTGGAGACAGCTGGGTGA
ATGCAACTAAATTTTTAACTGGAGCTTCAGCAGTTGGAAGCATTGCCATACCTGTAATTTTGAAGCATGCTGATATTATCGGCTGGGGTGCACTTGCACTGGACCTCTCG
TCCCTTATAGTTTTTGTGGTGGCCATTTTCTGTTATCTCTGGATGAGTAATGAAGACGACTATAATATACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTGGGAAACTGCTTGCATATGAGCAAAGTTGTAACGCTAGGAATCTTGGTTTCTGGAGGAATTGTGTTACAGTTTTTGGCATGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGCGTGGTCATGTATGTTCTTCTCCCAATGCCTTTGCTGTTTTTCGCTGGCTCTGATAGTTCTTCGCTATTTTCCGAATCTGGAGACAGCTGGGTGA
ATGCAACTAAATTTTTAACTGGAGCTTCAGCAGTTGGAAGCATTGCCATACCTGTAATTTTGAAGCATGCTGATATTATCGGCTGGGGTGCACTTGCACTGGACCTCTCG
TCCCTTATAGTTTTTGTGGTGGCCATTTTCTGTTATCTCTGGATGAGTAATGAAGACGACTATAATATACTCTAA
Protein sequenceShow/hide protein sequence
MADLGNCLHMSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDLS
SLIVFVVAIFCYLWMSNEDDYNIL