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Lag0033022 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033022
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate receptor 3.6
Genome locationchr11:40048649..40049020
RNA-Seq ExpressionLag0033022
SyntenyLag0033022
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG59671.1 hypothetical protein EZV62_014244 [Acer yangbiense]2.0e-1341.07Show/hide
Query:  SSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTE--TGKQLEPNPLYEEWTTVDQA
        +SSS+A +    PS  + + + FG+ +     +KLD NNY LW+ MV  +++G  +DG++ GT+  P EFI  E+T +  TG  L  NP YE+W   D  
Subjt:  SSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTE--TGKQLEPNPLYEEWTTVDQA

Query:  LSGWLFGSMHDS
        L GWL+GSM +S
Subjt:  LSGWLFGSMHDS

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]1.7e-2359.46Show/hide
Query:  SSSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQLEP--NPLYEEWTTVDQAL
        S S+++ +  A+V SA NI   SFGHPLST LTVKLD+ NY LW+GMVLA+L GQ VDG++L TK  PS++   T++TG  LEP  NP YEEW+ VDQA 
Subjt:  SSSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQLEP--NPLYEEWTTVDQAL

Query:  SGWLFGSMHDS
         GWLFGSM  S
Subjt:  SGWLFGSMHDS

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]2.4e-2254.24Show/hide
Query:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV
        ENSS       + +V  P+ +   ++SFGHPL TVLTVKLD+ NY LWRGMVLA+LRGQ  DG++LGT A+P +F+    T  T   L+ NP Y EW  V
Subjt:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV

Query:  DQALSGWLFGSMHDSCHC
        DQAL GWLFGSM  S  C
Subjt:  DQALSGWLFGSMHDSCHC

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]2.4e-2254.24Show/hide
Query:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV
        ENSS       + +V  P+ +   ++SFGHPL TVLTVKLD+ NY LWRGMVLA+LRGQ  DG++LGT A+P +F+    T  T   L+ NP Y EW  V
Subjt:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV

Query:  DQALSGWLFGSMHDSCHC
        DQAL GWLFGSM  S  C
Subjt:  DQALSGWLFGSMHDSCHC

XP_022842004.1 uncharacterized protein LOC111365701 [Olea europaea var. sylvestris]5.4e-1448.28Show/hide
Query:  FGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLE--PNPLYEEWTTVDQALSGWLFGSM
        FG  L+ ++++KLD+NN+LLW+ M+L I+RG N++G ILGTK  P EFI  + T E G  ++   NP Y +W  +DQ L GWL+ SM
Subjt:  FGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLE--PNPLYEEWTTVDQALSGWLFGSM

TrEMBL top hitse value%identityAlignment
A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like8.1e-2459.46Show/hide
Query:  SSSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQLEP--NPLYEEWTTVDQAL
        S S+++ +  A+V SA NI   SFGHPLST LTVKLD+ NY LW+GMVLA+L GQ VDG++L TK  PS++   T++TG  LEP  NP YEEW+ VDQA 
Subjt:  SSSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQLEP--NPLYEEWTTVDQAL

Query:  SGWLFGSMHDS
         GWLFGSM  S
Subjt:  SGWLFGSMHDS

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X21.2e-2254.24Show/hide
Query:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV
        ENSS       + +V  P+ +   ++SFGHPL TVLTVKLD+ NY LWRGMVLA+LRGQ  DG++LGT A+P +F+    T  T   L+ NP Y EW  V
Subjt:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV

Query:  DQALSGWLFGSMHDSCHC
        DQAL GWLFGSM  S  C
Subjt:  DQALSGWLFGSMHDSCHC

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X11.2e-2254.24Show/hide
Query:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV
        ENSS       + +V  P+ +   ++SFGHPL TVLTVKLD+ NY LWRGMVLA+LRGQ  DG++LGT A+P +F+    T  T   L+ NP Y EW  V
Subjt:  ENSSSSSSAAVSASV--PSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFI--EVTTETGKQLEPNPLYEEWTTV

Query:  DQALSGWLFGSMHDSCHC
        DQAL GWLFGSM  S  C
Subjt:  DQALSGWLFGSMHDSCHC

A0A803PAZ1 Uncharacterized protein5.3e-1546.15Show/hide
Query:  SFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEV----TTETGKQLEPNPLYEEWTTVDQALSGWLFGSMHDS
        SFG+ L+   ++KLD NNY LWR +V  I+RG  ++G++ GTK  P+EF+          G +L+ NP YE W   DQ L GWL+GSM DS
Subjt:  SFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEV----TTETGKQLEPNPLYEEWTTVDQALSGWLFGSMHDS

A0A803PM38 Uncharacterized protein3.4e-1442.59Show/hide
Query:  AVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQL---EPNPLYEEWTTVDQALSGWLFG
        +V    P A NIV   FG  L+    +KLD NN+ LWR MV AI+RG  +DG++ GT  +P EF+  T   G      + NP +E+W   DQ L GWL+G
Subjt:  AVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQL---EPNPLYEEWTTVDQALSGWLFG

Query:  SMHDSCHC
        SM +   C
Subjt:  SMHDSCHC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATGAAAATTCTTCATCCTCTTCTTCTGCAGCCGTCTCAGCTTCGGTTCCATCAGCTGCAAATATTGTTAGTTCTTCGTTTGGTCATCCGCTCAGCACAGTTCT
CACAGTAAAGCTGGATGAGAACAATTATTTACTGTGGAGAGGAATGGTCCTTGCCATTTTGCGAGGTCAAAACGTCGATGGGTTCATTCTGGGAACAAAGGCTCAACCAT
CTGAGTTTATCGAAGTCACTACAGAAACTGGTAAACAACTTGAACCAAATCCCTTGTACGAAGAATGGACTACGGTTGATCAGGCATTATCTGGTTGGCTGTTTGGATCC
ATGCACGACTCCTGTCATTGCCTCGAATGTTGCGAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGATGAAAATTCTTCATCCTCTTCTTCTGCAGCCGTCTCAGCTTCGGTTCCATCAGCTGCAAATATTGTTAGTTCTTCGTTTGGTCATCCGCTCAGCACAGTTCT
CACAGTAAAGCTGGATGAGAACAATTATTTACTGTGGAGAGGAATGGTCCTTGCCATTTTGCGAGGTCAAAACGTCGATGGGTTCATTCTGGGAACAAAGGCTCAACCAT
CTGAGTTTATCGAAGTCACTACAGAAACTGGTAAACAACTTGAACCAAATCCCTTGTACGAAGAATGGACTACGGTTGATCAGGCATTATCTGGTTGGCTGTTTGGATCC
ATGCACGACTCCTGTCATTGCCTCGAATGTTGCGAGCTTTAA
Protein sequenceShow/hide protein sequence
MGDENSSSSSSAAVSASVPSAANIVSSSFGHPLSTVLTVKLDENNYLLWRGMVLAILRGQNVDGFILGTKAQPSEFIEVTTETGKQLEPNPLYEEWTTVDQALSGWLFGS
MHDSCHCLECCEL