; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033031 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033031
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein LOL1
Genome locationchr11:40145597..40147222
RNA-Seq ExpressionLag0033031
SyntenyLag0033031
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR036280 - Multiheme cytochrome superfamily
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148490.1 protein LOL1 [Cucumis sativus]2.1e-7397.92Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPPAPYT P+NATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMS SAIDQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

XP_008465951.1 PREDICTED: protein LOL1 [Cucumis melo]1.7e-7297.22Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPPAPYT P+NATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVP PGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMS SAIDQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

XP_022930968.1 protein LOL1 [Cucurbita moschata]6.0e-7396.53Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPP PYTPPAN  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMS SA+DQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

XP_022952054.1 protein LOL1-like [Cucurbita moschata]7.8e-7396.53Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPPAPY+ PANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTS+GM+ SAIDQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

XP_022996091.1 protein LOL1 [Cucurbita maxima]1.3e-7295.83Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPP PYTPPAN  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKC+VCNFVTSVGMS SA+DQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

TrEMBL top hitse value%identityAlignment
A0A0A0LEE4 Uncharacterized protein1.0e-7397.92Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPPAPYT P+NATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMS SAIDQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

A0A1S3CQ35 protein LOL18.5e-7397.22Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPPAPYT P+NATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVP PGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMS SAIDQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

A0A6J1ET02 protein LOL12.9e-7396.53Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPP PYTPPAN  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMS SA+DQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

A0A6J1GKN9 protein LOL1-like3.8e-7396.53Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPPAPY+ PANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTS+GM+ SAIDQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

A0A6J1K0Y9 protein LOL16.5e-7395.83Show/hide
Query:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
        MPPVPLAPYPTPP PYTPPAN  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ
Subjt:  MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQ

Query:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA
        VAHVSCGNCRMLLMYQYGARSVKC+VCNFVTSVGMS SA+DQKA
Subjt:  VAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA

SwissProt top hitse value%identityAlignment
P94077 Protein LSD14.0e-3559.68Show/hide
Query:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT--EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA-LEANQVAH--------VSCGNCRML
        Q QLVC GCRNLL+YP GA++V CA+CN +  VPPP    +MA ++CGGC T+LMY RGA+SV+CSCC T NL    +NQVAH        ++CG+CR  
Subjt:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT--EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA-LEANQVAH--------VSCGNCRML

Query:  LMYQYGARSVKCAVCNFVTSVGMS
        LMY YGA SVKCAVC FVT+V MS
Subjt:  LMYQYGARSVKCAVCNFVTSVGMS

Q0J7V9 Protein LSD12.1e-6587.94Show/hide
Query:  PVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVA
        PVPLAPYPTPP P+TPP N  QSQLVCSGCRNLL+YP GATSVCCAVC+ VTAVP PGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA+EANQVA
Subjt:  PVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVA

Query:  HVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK
        HV+CGNCRMLLMYQYGARSVKCAVCNFVTSVG S    DQK
Subjt:  HVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK

Q2QMB3 Protein LOL25.9e-3964.04Show/hide
Query:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTA-VPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARSV
        QSQ+VC GCRN+LLYP GA SVCCAVC+AV++  P PG ++A L+CGGC TLLMY R ATSV+CSCC TVNL    + +AH++CG C+ +LMY YGA SV
Subjt:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTA-VPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARSV

Query:  KCAVCNFVTSVGMS
        KCA+CNF+T+ GM+
Subjt:  KCAVCNFVTSVGMS

Q6ASS2 Protein LOL32.2e-3862.71Show/hide
Query:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPG--TEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARS
        QSQ+VC GCR++L YP GA SVCCA+C A+T VPPP    EMA L+CGGC TLLMY R A +V+CSCC TVNL    N +AHVSCG CR  LMY YGA S
Subjt:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPG--TEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARS

Query:  VKCAVCNFVTSVGMSASA
        VKCA+C+++T+ GM+  A
Subjt:  VKCAVCNFVTSVGMSASA

Q93ZB1 Protein LOL11.1e-6686.67Show/hide
Query:  PVPLAPYPTPPAP------YTPPANAT---QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN
        PVPLAPYPTPPAP       TPPAN +   QSQLVCSGCRNLL+YPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN
Subjt:  PVPLAPYPTPPAP------YTPPANAT---QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN

Query:  LALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK
        LALEANQVAHV+CGNC MLLMYQYGARSVKCAVCNFVTSVG S S  D K
Subjt:  LALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK

Arabidopsis top hitse value%identityAlignment
AT1G32540.1 lsd one like 11.9e-6193.33Show/hide
Query:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARSVK
        QSQLVCSGCRNLL+YPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHV+CGNC MLLMYQYGARSVK
Subjt:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARSVK

Query:  CAVCNFVTSVGMSASAIDQK
        CAVCNFVTSVG S S  D K
Subjt:  CAVCNFVTSVGMSASAIDQK

AT1G32540.2 lsd one like 18.1e-6886.67Show/hide
Query:  PVPLAPYPTPPAP------YTPPANAT---QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN
        PVPLAPYPTPPAP       TPPAN +   QSQLVCSGCRNLL+YPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN
Subjt:  PVPLAPYPTPPAP------YTPPANAT---QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN

Query:  LALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK
        LALEANQVAHV+CGNC MLLMYQYGARSVKCAVCNFVTSVG S S  D K
Subjt:  LALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK

AT1G32540.3 lsd one like 18.1e-6886.67Show/hide
Query:  PVPLAPYPTPPAP------YTPPANAT---QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN
        PVPLAPYPTPPAP       TPPAN +   QSQLVCSGCRNLL+YPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN
Subjt:  PVPLAPYPTPPAP------YTPPANAT---QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN

Query:  LALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK
        LALEANQVAHV+CGNC MLLMYQYGARSVKCAVCNFVTSVG S S  D K
Subjt:  LALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSASAIDQK

AT4G20380.1 LSD1 zinc finger family protein2.8e-3659.68Show/hide
Query:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT--EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA-LEANQVAH--------VSCGNCRML
        Q QLVC GCRNLL+YP GA++V CA+CN +  VPPP    +MA ++CGGC T+LMY RGA+SV+CSCC T NL    +NQVAH        ++CG+CR  
Subjt:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT--EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA-LEANQVAH--------VSCGNCRML

Query:  LMYQYGARSVKCAVCNFVTSVGMS
        LMY YGA SVKCAVC FVT+V MS
Subjt:  LMYQYGARSVKCAVCNFVTSVGMS

AT4G20380.2 LSD1 zinc finger family protein2.8e-3659.68Show/hide
Query:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT--EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA-LEANQVAH--------VSCGNCRML
        Q QLVC GCRNLL+YP GA++V CA+CN +  VPPP    +MA ++CGGC T+LMY RGA+SV+CSCC T NL    +NQVAH        ++CG+CR  
Subjt:  QSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT--EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLA-LEANQVAH--------VSCGNCRML

Query:  LMYQYGARSVKCAVCNFVTSVGMS
        LMY YGA SVKCAVC FVT+V MS
Subjt:  LMYQYGARSVKCAVCNFVTSVGMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCAGTTCCTCTTGCACCATATCCAACTCCCCCAGCTCCTTATACACCACCTGCTAATGCCACACAGAGCCAGCTTGTTTGCTCAGGATGCAGAAACCTTTTACT
TTATCCAGTTGGGGCAACCTCTGTTTGCTGTGCAGTTTGTAATGCTGTTACTGCCGTACCGCCTCCCGGCACAGAAATGGCACAATTGGTATGTGGAGGCTGCCATACTC
TTCTCATGTACATCCGTGGCGCTACGAGCGTACAATGTTCTTGTTGCCACACCGTCAACTTAGCCTTGGAAGCGAATCAGGTGGCGCACGTTAGCTGTGGGAACTGCAGG
ATGCTACTGATGTATCAGTATGGAGCACGTTCAGTGAAATGTGCAGTATGCAATTTTGTGACATCAGTTGGGATGTCGGCGAGTGCAATCGATCAAAAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCAGTTCCTCTTGCACCATATCCAACTCCCCCAGCTCCTTATACACCACCTGCTAATGCCACACAGAGCCAGCTTGTTTGCTCAGGATGCAGAAACCTTTTACT
TTATCCAGTTGGGGCAACCTCTGTTTGCTGTGCAGTTTGTAATGCTGTTACTGCCGTACCGCCTCCCGGCACAGAAATGGCACAATTGGTATGTGGAGGCTGCCATACTC
TTCTCATGTACATCCGTGGCGCTACGAGCGTACAATGTTCTTGTTGCCACACCGTCAACTTAGCCTTGGAAGCGAATCAGGTGGCGCACGTTAGCTGTGGGAACTGCAGG
ATGCTACTGATGTATCAGTATGGAGCACGTTCAGTGAAATGTGCAGTATGCAATTTTGTGACATCAGTTGGGATGTCGGCGAGTGCAATCGATCAAAAAGCATAA
Protein sequenceShow/hide protein sequence
MPPVPLAPYPTPPAPYTPPANATQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVSCGNCR
MLLMYQYGARSVKCAVCNFVTSVGMSASAIDQKA