; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033037 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033037
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr11:40249004..40250188
RNA-Seq ExpressionLag0033037
SyntenyLag0033037
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]6.7e-7442.89Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQ-PSRVNLAYEQWYERDQTLITLINATLTQTALSY
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKLF +VDG+   P+    T    P + N  YE W  +DQ L+T+INATL+  AL+Y
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQ-PSRVNLAYEQWYERDQTLITLINATLTQTALSY

Query:  VIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDE
        V+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF+E
Subjt:  VIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDE

Query:  LHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNA----NASNQFSSRVH--
        LH+L++ EE A+ KQ+K +++ +   +  ++S   Q+  +   + NNN  R         G G G ++      G G+FS +A    +  +Q    VH  
Subjt:  LHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNA----NASNQFSSRVH--

Query:  ---CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
           CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN H+T+D+  +S++  YNGEE + VGNG
Subjt:  ---CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]4.0e-7141.41Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKL+ ++DG+   P        T   P + N +YE W  +DQ L+T+INATL+  AL
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL

Query:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF
        +YV+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF
Subjt:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF

Query:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH
        +ELH+L++ EE A+ KQ+K +++ +   +  +            +S +       FD N   G G G  +      G G+FS +A      SS     VH
Subjt:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH

Query:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
             CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN  +T+D+  +S++  YNGEE + +GNG
Subjt:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]4.0e-7141.41Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKL+ ++DG+   P        T   P + N +YE W  +DQ L+T+INATL+  AL
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL

Query:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF
        +YV+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF
Subjt:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF

Query:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH
        +ELH+L++ EE A+ KQ+K +++ +   +  +            +S +       FD N   G G G  +      G G+FS +A      SS     VH
Subjt:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH

Query:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
             CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN  +T+D+  +S++  YNGEE + +GNG
Subjt:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]6.7e-7442.89Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQ-PSRVNLAYEQWYERDQTLITLINATLTQTALSY
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKLF +VDG+   P+    T    P + N  YE W  +DQ L+T+INATL+  AL+Y
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQ-PSRVNLAYEQWYERDQTLITLINATLTQTALSY

Query:  VIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDE
        V+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF+E
Subjt:  VIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDE

Query:  LHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNA----NASNQFSSRVH--
        LH+L++ EE A+ KQ+K +++ +   +  ++S   Q+  +   + NNN  R         G G G ++      G G+FS +A    +  +Q    VH  
Subjt:  LHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNA----NASNQFSSRVH--

Query:  ---CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
           CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN H+T+D+  +S++  YNGEE + VGNG
Subjt:  ---CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]3.0e-8245.59Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVIL----RTEGQPSR------VNLAYEQWYERDQTLITLINA
        + +  + ++ + LL+NICNLVS+RLDS++++LW+FQ++ +LK+HKLF ++DGS+ AP   L     TE QP+       +N  +E W  +DQ L+TLINA
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVIL----RTEGQPSR------VNLAYEQWYERDQTLITLINA

Query:  TLTQTALSYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRT
        TL+  AL+YV+   T+K+VW+ LEKH+SS++ TN+V LK++LQS++KK+ E+ID YV+ +K+I ++ A VS+ I+ E L+IY +NGL + YN   TS+RT
Subjt:  TLTQTALSYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRT

Query:  RSDKLTFDELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS
        R+  ++F+ELH+ MK+EE AI+KQ K E+  +  +   A+S + QNR    ++ + N+  DR  G ++ GRG+ N   T ++QG+G+ S N   S Q  +
Subjt:  RSDKLTFDELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS

Query:  RVHCQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANL---SVSTTYNGEENITVGNG
        R  CQIC +  H ALDCYNRMN+ +QGRHPP +L AM A   +NS      S P     WL+D+ CN H+T DL+NL   S+++ YNGEENI+VG+G
Subjt:  RVHCQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANL---SVSTTYNGEENITVGNG

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X22.0e-7141.41Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKL+ ++DG+   P        T   P + N +YE W  +DQ L+T+INATL+  AL
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL

Query:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF
        +YV+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF
Subjt:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF

Query:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH
        +ELH+L++ EE A+ KQ+K +++ +   +  +            +S +       FD N   G G G  +      G G+FS +A      SS     VH
Subjt:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH

Query:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
             CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN  +T+D+  +S++  YNGEE + +GNG
Subjt:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X12.0e-7141.41Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKL+ ++DG+   P        T   P + N +YE W  +DQ L+T+INATL+  AL
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL

Query:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF
        +YV+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF
Subjt:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF

Query:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH
        +ELH+L++ EE A+ KQ+K +++ +   +  +            +S +       FD N   G G G  +      G G+FS +A      SS     VH
Subjt:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH

Query:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
             CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN  +T+D+  +S++  YNGEE + +GNG
Subjt:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

A0A5B7BD59 Retrotran_gag_3 domain-containing protein6.5e-7542.89Show/hide
Query:  SGSNSNSNTSVS--------LLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEG--QPSRVNLAYEQWYERDQTLITLINA
        S S+S+S++SVS        LL N+CNL++V+LDS+NY+ W+FQ + +L++H L  +VDG+   P   L  E     +  N +Y  W  +DQ L+ +INA
Subjt:  SGSNSNSNTSVS--------LLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEG--QPSRVNLAYEQWYERDQTLITLINA

Query:  TLTQTALSYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRT
        TLT TALS VIG KT+++VW  LE+HFSS++ +NI+ LK  LQS + K  +TIDQY+Q VK   + LA VSV ID EDL+IY +NGLPS +N F+T++RT
Subjt:  TLTQTALSYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRT

Query:  RSDKLTFDELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNS------FSTPSS-----QGQGQFS
        R+  LT +E+H+L++ EE +++   K  +         +A +   +R  + N+  NN+GR R   N  GGR   +       F++P+S     +GQ QF 
Subjt:  RSDKLTFDELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNS------FSTPSS-----QGQGQFS

Query:  SNANASNQF---SSRVHCQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGE
         +  +SNQ    + ++ CQIC + +H+ALDCY+RMNY+YQGRHPP++L AMAAS  S+ + P+         +WL+D+G   H+T D + LS+S  Y GE
Subjt:  SNANASNQF---SSRVHCQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGE

Query:  ENITVGNG
        + ++VGNG
Subjt:  ENITVGNG

A0A5D3CLI6 T4.52.0e-7141.41Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL
        S +  +S + + LL+NICNL+S+RLDS+N+VLW+FQ++ +LK+HKL+ ++DG+   P        T   P + N +YE W  +DQ L+T+INATL+  AL
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAP---EVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTAL

Query:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF
        +YV+G  ++K+VWD L K +SS + +N+V LK++LQ++ KK  E+ID Y++ +K+I ++LA VS  I+ EDL+IY +NGLP+ YN F+TS+RTRS  +TF
Subjt:  SYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTF

Query:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH
        +ELH+L++ EE A+ KQ+K +++ +   +  +            +S +       FD N   G G G  +      G G+FS +A      SS     VH
Subjt:  DELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS----RVH

Query:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
             CQIC R  H ALDC+NRMNY++QGRHPP +L AM AS ++      + S        L+D+GCN  +T+D+  +S++  YNGEE + +GNG
Subjt:  -----CQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

A0A6J1D9L6 uncharacterized protein LOC1110188921.4e-8245.59Show/hide
Query:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVIL----RTEGQPSR------VNLAYEQWYERDQTLITLINA
        + +  + ++ + LL+NICNLVS+RLDS++++LW+FQ++ +LK+HKLF ++DGS+ AP   L     TE QP+       +N  +E W  +DQ L+TLINA
Subjt:  SGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVIL----RTEGQPSR------VNLAYEQWYERDQTLITLINA

Query:  TLTQTALSYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRT
        TL+  AL+YV+   T+K+VW+ LEKH+SS++ TN+V LK++LQS++KK+ E+ID YV+ +K+I ++ A VS+ I+ E L+IY +NGL + YN   TS+RT
Subjt:  TLTQTALSYVIGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRT

Query:  RSDKLTFDELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS
        R+  ++F+ELH+ MK+EE AI+KQ K E+  +  +   A+S + QNR    ++ + N+  DR  G ++ GRG+ N   T ++QG+G+ S N   S Q  +
Subjt:  RSDKLTFDELHILMKTEEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSS

Query:  RVHCQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANL---SVSTTYNGEENITVGNG
        R  CQIC +  H ALDCYNRMN+ +QGRHPP +L AM A   +NS      S P     WL+D+ CN H+T DL+NL   S+++ YNGEENI+VG+G
Subjt:  RVHCQICQRYDHNALDCYNRMNYSYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANL---SVSTTYNGEENITVGNG

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.5e-2325.53Show/hide
Query:  SNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTALSYVIGCKTA
        +NTS+ L  N+ N+   +L S+NY++W  Q+  L   ++L  ++DGS   P   + T+  P RVN  Y +W  +D+ + + +   ++ +    V    TA
Subjt:  SNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTALSYVIGCKTA

Query:  KEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDELHILMKT
         ++W+ L K +++ ++ ++  L+T+L+    K  +TID Y+Q +    ++LA++   +D ++ +   +  LP  Y      +  +    T  E+H     
Subjt:  KEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDELHILMKT

Query:  EEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSSRVHCQICQRYDHNALD
         E  +  ++K+   +S   +   A+          N+NNN    +R+D NR+      N+ S P  Q    F  N N S  +  +  CQIC    H+A  
Subjt:  EEIAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSSRVHCQICQRYDHNALD

Query:  CYNRMNY--SYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
        C    ++  S   + PP+         +     P S      S  WL D+G   H+T+D  NLS+   Y G +++ V +G
Subjt:  CYNRMNY--SYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.0e-1323.68Show/hide
Query:  SVSLLN-NICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTALSYVIGCKTAKE
        + ++LN N+ N+   +L S+NY++W  Q+  L   ++L  ++DGS   P   + T+  P RVN  Y +W  +D+ + + I   ++ +    V    TA +
Subjt:  SVSLLN-NICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTALSYVIGCKTAKE

Query:  VWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDELHILMKTEE
        +W+ L K +++ ++ ++    T+L+ + +                 ++LA++   +D ++ +   +  LP  Y      +  +    +  E+H      E
Subjt:  VWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDELHILMKTEE

Query:  IAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSSRVHCQICQRYDHNALDCY
          I +++K+   NS   +   A++      N  N N NN+G +R   N +    R NS+  PSS G     S+      +  R  CQIC    H+A  C 
Subjt:  IAIKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSSRVHCQICQRYDHNALDCY

Query:  NRMNY----SYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG
            +    + Q    P       A+ + NS        P  +  WL D+G   H+T+D  NLS    Y G +++ + +G
Subjt:  NRMNY----SYQGRHPPAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCGTCAACGAACAAGCCCTAATATCTGGTTCGAATTCAAATTCGAACACTTCAGTCTCTCTACTCAATAACATTTGTAATCTCGTCTCCGTTCGTCTGGATTC
CTCCAATTATGTGCTGTGGCGTTTTCAAATTTCGCATCTTCTCAAATCGCACAAGTTGTTCAAATATGTCGATGGATCGATTGAAGCTCCTGAAGTCATTCTTCGTACTG
AGGGACAACCTTCTCGTGTTAATCTTGCTTATGAACAGTGGTATGAAAGAGATCAAACACTAATTACGTTGATTAATGCGACCTTGACTCAGACGGCTCTATCATATGTA
ATCGGATGTAAGACTGCCAAGGAAGTTTGGGACAAATTGGAGAAACATTTTTCTTCTTCAACGCACACAAATATTGTTGGATTAAAAACTGAATTACAAAGTGTCATGAA
GAAATCTGGGGAAACTATTGATCAATATGTTCAACACGTCAAGGACATTGTTAATCGCCTTGCTGTTGTCTCCGTGATCATTGATTCGGAAGATTTGATCATTTATAAGG
TTAATGGTTTACCGTCAGTGTACAACATTTTCAAGACATCGCTGCGTACTAGATCTGATAAGTTGACCTTCGATGAATTACACATTCTGATGAAAACGGAAGAGATTGCC
ATCAAGAAGCAAACTAAGGTTGAGGAAACAAATTCAGTTGCGCATCTTGCTAAGGCTGCCAGTATTGAACCACAAAACAGAGGAAATTGGCGGAACAGTAATAATAATAA
TAAAGGACGCGATCGATTTGATGGTAATCGAAGCGGTGGACGAGGCCGAGGAAATTCTTTTTCGACTCCTTCTTCTCAAGGCCAAGGTCAGTTTTCCTCTAATGCGAATG
CTTCTAATCAGTTTTCCAGCAGAGTACATTGTCAGATCTGTCAACGATATGACCACAATGCCCTTGATTGCTACAATCGGATGAATTATTCATATCAAGGACGTCATCCT
CCTGCTAAACTAGTTGCCATGGCTGCGTCTACTTCGTCCAATTCCAGTGGACCTTCCTCTGGATCTTTTCCTCAAGAATCTCAGGTTTGGCTCTCGGACACTGGTTGCAA
TGCACATTTAACTAACGATTTAGCCAATCTCAGTGTGTCAACGACTTACAATGGTGAGGAGAATATCACTGTTGGAAATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACCGTCAACGAACAAGCCCTAATATCTGGTTCGAATTCAAATTCGAACACTTCAGTCTCTCTACTCAATAACATTTGTAATCTCGTCTCCGTTCGTCTGGATTC
CTCCAATTATGTGCTGTGGCGTTTTCAAATTTCGCATCTTCTCAAATCGCACAAGTTGTTCAAATATGTCGATGGATCGATTGAAGCTCCTGAAGTCATTCTTCGTACTG
AGGGACAACCTTCTCGTGTTAATCTTGCTTATGAACAGTGGTATGAAAGAGATCAAACACTAATTACGTTGATTAATGCGACCTTGACTCAGACGGCTCTATCATATGTA
ATCGGATGTAAGACTGCCAAGGAAGTTTGGGACAAATTGGAGAAACATTTTTCTTCTTCAACGCACACAAATATTGTTGGATTAAAAACTGAATTACAAAGTGTCATGAA
GAAATCTGGGGAAACTATTGATCAATATGTTCAACACGTCAAGGACATTGTTAATCGCCTTGCTGTTGTCTCCGTGATCATTGATTCGGAAGATTTGATCATTTATAAGG
TTAATGGTTTACCGTCAGTGTACAACATTTTCAAGACATCGCTGCGTACTAGATCTGATAAGTTGACCTTCGATGAATTACACATTCTGATGAAAACGGAAGAGATTGCC
ATCAAGAAGCAAACTAAGGTTGAGGAAACAAATTCAGTTGCGCATCTTGCTAAGGCTGCCAGTATTGAACCACAAAACAGAGGAAATTGGCGGAACAGTAATAATAATAA
TAAAGGACGCGATCGATTTGATGGTAATCGAAGCGGTGGACGAGGCCGAGGAAATTCTTTTTCGACTCCTTCTTCTCAAGGCCAAGGTCAGTTTTCCTCTAATGCGAATG
CTTCTAATCAGTTTTCCAGCAGAGTACATTGTCAGATCTGTCAACGATATGACCACAATGCCCTTGATTGCTACAATCGGATGAATTATTCATATCAAGGACGTCATCCT
CCTGCTAAACTAGTTGCCATGGCTGCGTCTACTTCGTCCAATTCCAGTGGACCTTCCTCTGGATCTTTTCCTCAAGAATCTCAGGTTTGGCTCTCGGACACTGGTTGCAA
TGCACATTTAACTAACGATTTAGCCAATCTCAGTGTGTCAACGACTTACAATGGTGAGGAGAATATCACTGTTGGAAATGGTTAG
Protein sequenceShow/hide protein sequence
MTTVNEQALISGSNSNSNTSVSLLNNICNLVSVRLDSSNYVLWRFQISHLLKSHKLFKYVDGSIEAPEVILRTEGQPSRVNLAYEQWYERDQTLITLINATLTQTALSYV
IGCKTAKEVWDKLEKHFSSSTHTNIVGLKTELQSVMKKSGETIDQYVQHVKDIVNRLAVVSVIIDSEDLIIYKVNGLPSVYNIFKTSLRTRSDKLTFDELHILMKTEEIA
IKKQTKVEETNSVAHLAKAASIEPQNRGNWRNSNNNNKGRDRFDGNRSGGRGRGNSFSTPSSQGQGQFSSNANASNQFSSRVHCQICQRYDHNALDCYNRMNYSYQGRHP
PAKLVAMAASTSSNSSGPSSGSFPQESQVWLSDTGCNAHLTNDLANLSVSTTYNGEENITVGNG