CuGenDBv2

Gene ID	Lag0033079
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribosome maturation factor
Genome location	chr11:40577189..40578261
RNA-Seq Expression	Lag0033079
Synteny	Lag0033079
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606266.1 hypothetical protein SDJN03_03583, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-62

91.91

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSS  ILNYDGQDD+KASKSFRFSFP+PSP RQEKFVHAIPILTIICFLILY+ SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFKRPS+ L IKA+GDELIVPKKGNILAIQSLR
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

XP_022930990.1 uncharacterized protein LOC111437318 [Cucurbita moschata]

7.8e-62

91.18

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSS  ILNYDGQDD+KASKSFRFSFP+PSP RQEKFVHAIPILTI CFLILY+ SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFKRPS+ L IKA+GDELIVPKKGNILAIQSLR
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

XP_022967347.1 uncharacterized protein LOC111466893 isoform X2 [Cucurbita maxima]

8.6e-61

88.97

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD +PADDQKR KHSPSSSSI+ YDGQDDDK SKSFRFSFPSPSPPRQE  VHAIPILTIICFLILY+CSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFH FKRPS+QL IKADGDELIVPK+GNILAIQS R
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

XP_022995482.1 uncharacterized protein LOC111491006 [Cucurbita maxima]

2.4e-63

93.38

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSS ILNYDGQDDDKASKSFRFSFP+PSP RQEKFVHAIPILTIICFLILY+ SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFKRPS+ L IKA+GDELIVPKKGNILAIQSLR
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

XP_038888243.1 uncharacterized protein LOC120078100 [Benincasa hispida]

5.4e-63

91.18

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD VPADDQKR KHSPSSSSI NYDGQDDD+ASKSFRFSFPSP PPRQEKFVHAIPILTIICFLILY CSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFKRP++QL IKADGDELI+PKKGNILAIQS R
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LE94 Uncharacterized protein

4.2e-61

90.44

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD  PADDQKR KHSPSSSSILNY GQDDDK+SKSFRFSFPSPSPPRQEK VHAIPILTIICFLILY+ SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFK PS QL IKADGDELI+PKKGNILAIQS R
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

A0A6J1EYA9 uncharacterized protein LOC111437318

3.8e-62

91.18

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSS  ILNYDGQDD+KASKSFRFSFP+PSP RQEKFVHAIPILTI CFLILY+ SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFKRPS+ L IKA+GDELIVPKKGNILAIQSLR
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

A0A6J1HQJ6 uncharacterized protein LOC111466893 isoform X2

4.2e-61

88.97

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD +PADDQKR KHSPSSSSI+ YDGQDDDK SKSFRFSFPSPSPPRQE  VHAIPILTIICFLILY+CSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFH FKRPS+QL IKADGDELIVPK+GNILAIQS R
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

A0A6J1HRQ8 uncharacterized protein LOC111466893 isoform X1

6.0e-60

88.32

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD +PADDQKR KHSPSSSSI+ YDGQDDDK SKSFRFSFPSPSPPRQE  VHAIPILTIICFLILY+CSH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLG-IKADGDELIVPKKGNILAIQSLR
        QFH FKRPS+QL  IKADGDELIVPK+GNILAIQS R
Subjt:  QFHGFKRPSDQLG-IKADGDELIVPKKGNILAIQSLR

A0A6J1JZ13 uncharacterized protein LOC111491006

1.2e-63

93.38

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSS ILNYDGQDDDKASKSFRFSFP+PSP RQEKFVHAIPILTIICFLILY+ SHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLA

Query:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR
        QFHGFKRPS+ L IKA+GDELIVPKKGNILAIQSLR
Subjt:  QFHGFKRPSDQLGIKADGDELIVPKKGNILAIQSLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G35470.1 unknown protein

5.4e-21

48.2

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Query:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSP-SSSSILNYDGQDDDKASKSFRFSFPSP---SPPRQEKFVHAIPILTIICFLILYLCSHSPSQ
        MQR SL S  SKLH +G G K D    DD K    SP SSSS ++YD  +          S  SP   +  +QEK VH IPILT+ICF+ILYL S++PSQ
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSP-SSSSILNYDGQDDDKASKSFRFSFPSP---SPPRQEKFVHAIPILTIICFLILYLCSHSPSQ

Query:  SDLAQFHGFKRPSDQL-GIKADGDELIVPKKGNILAIQS
        SDLAQF+GF RPS  L     +GDE+    + + L+I+S
Subjt:  SDLAQFHGFKRPSDQL-GIKADGDELIVPKKGNILAIQS

Sequences

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CDS sequence

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ATGCAAAGGCAATCTCTAGGCTCACCAGTCTCCAAGCTACACGGCCATGGCGCCGGAGCAAAATCCGATGCAGTTCCGGCCGACGATCAAAAGCGCAACAAGCACTCTCC
ATCTTCTTCCTCGATTCTCAACTACGACGGACAAGACGACGATAAAGCCTCTAAATCTTTCCGATTCTCATTTCCATCGCCTTCTCCTCCTCGGCAAGAGAAGTTCGTCC
ACGCCATCCCTATCCTCACCATTATCTGCTTCCTCATCCTTTACCTCTGCTCGCACAGTCCTTCGCAGTCAGATTTGGCTCAGTTTCATGGATTCAAGCGTCCTTCAGAT
CAATTAGGAATCAAAGCTGATGGAGACGAACTTATTGTACCGAAGAAAGGCAACATTCTGGCGATTCAAAGTCTCCGATACAAAACCGCCGATCGACGCGCCGCTCCTTC
GCCGGAGCTAGAGCGCGTGAAAGGCCGGCGCGGCGGAGATGGAAATGGAATCCAGCTGGAATATATTTACTGCTATTTTCGATTTTTCGAATCGGACCGTTAA

mRNA sequence

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Protein sequence

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MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSSILNYDGQDDDKASKSFRFSFPSPSPPRQEKFVHAIPILTIICFLILYLCSHSPSQSDLAQFHGFKRPSD
QLGIKADGDELIVPKKGNILAIQSLRYKTADRRAAPSPELERVKGRRGGDGNGIQLEYIYCYFRFFESDR

Lag0033079 (gene) of Sponge gourd (AG-4) v1 genome