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Lag0033086 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033086
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioninactive poly [ADP-ribose] polymerase RCD1
Genome locationchr11:40678585..40679166
RNA-Seq ExpressionLag0033086
SyntenyLag0033086
Gene Ontology termsGO:0003950 - NAD+ ADP-ribosyltransferase activity (molecular function)
InterPro domainsIPR022003 - RST domain
IPR044964 - Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036212.1 Inactive poly [ADP-ribose] polymerase RCD1 [Cucurbita argyrosperma subsp. argyrosperma]9.9e-2284.29Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKTVAIKAKE
        M FSMLF+AISKEVSL++MK V  HYGLFREKKI+RDEFIRRLRSIVGDPLLRS LTSL CKTVA KAKE
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKTVAIKAKE

XP_022159740.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Momordica charantia]1.5e-2293.55Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFS LFNAISKEVSLNDMK VNGHYGLFREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

XP_022159742.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Momordica charantia]1.5e-2293.55Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFS LFNAISKEVSLNDMK VNGHYGLFREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

XP_022967219.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita maxima]3.4e-2293.55Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFSMLFNAISKEVSLNDMKSV GHY LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

XP_023553913.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo]1.7e-2191.94Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFSMLFNAISKEVSLNDMK V GHY LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

TrEMBL top hitse value%identityAlignment
A0A5D3E6F2 Inactive poly5.9e-2085.48Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPF  L NAISK+VSLNDMK V GHYGLFREKKI+RDEF+RRLRSIVGD LLRSTLTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

A0A6J1E0N0 inactive poly [ADP-ribose] polymerase RCD1-like isoform X27.4e-2393.55Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFS LFNAISKEVSLNDMK VNGHYGLFREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

A0A6J1E4V0 inactive poly [ADP-ribose] polymerase RCD1-like isoform X17.4e-2393.55Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFS LFNAISKEVSLNDMK VNGHYGLFREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

A0A6J1HJF2 inactive poly [ADP-ribose] polymerase RCD1-like isoform X18.2e-2291.94Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFSMLFNAISKEVSLNDMK V GHY LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

A0A6J1HW58 inactive poly [ADP-ribose] polymerase RCD1-like isoform X11.7e-2293.55Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        MPFSMLFNAISKEVSLNDMKSV GHY LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCK
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

SwissProt top hitse value%identityAlignment
O82289 Probable inactive poly [ADP-ribose] polymerase SRO19.4e-0749.18Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQ
        MPF +LF AIS +++  DM  +   Y   REKK++R EF + L  IVG D LL ST+T LQ
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQ

Q8RY59 Inactive poly [ADP-ribose] polymerase RCD12.8e-1158.33Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        MPF  LF AIS +V+ NDM  +N  Y   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

Q9STU1 Probable inactive poly [ADP-ribose] polymerase SRO44.4e-0438.6Show/hide
Query:  FSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL
        F +L N+ISK ++ + ++ ++ HY   ++++I+R E I+RLRSI GD LL   + S+
Subjt:  FSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL

Arabidopsis top hitse value%identityAlignment
AT1G32230.1 WWE protein-protein interaction domain protein family2.0e-1258.33Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        MPF  LF AIS +V+ NDM  +N  Y   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT1G32230.2 WWE protein-protein interaction domain protein family2.0e-1258.33Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        MPF  LF AIS +V+ NDM  +N  Y   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT1G32230.3 WWE protein-protein interaction domain protein family2.0e-1258.33Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        MPF  LF AIS +V+ NDM  +N  Y   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT2G35510.1 similar to RCD one 16.7e-0849.18Show/hide
Query:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQ
        MPF +LF AIS +++  DM  +   Y   REKK++R EF + L  IVG D LL ST+T LQ
Subjt:  MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVG-DPLLRSTLTSLQ

AT3G47720.1 similar to RCD one 43.1e-0538.6Show/hide
Query:  FSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL
        F +L N+ISK ++ + ++ ++ HY   ++++I+R E I+RLRSI GD LL   + S+
Subjt:  FSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTTTCAATGCTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATCGGTGAATGGTCATTATGGGTTATTTAGAGAAAAGAAGATCAATAGGGA
CGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGACGGTTGCCATAAAAGCTAAAGAAGCTGCAAAAG
CGTTAGATCTGTCCTTCTCCTTCCCTTCACCAAACGCATGCACACCAAAGAACACTGCAGTTACAAAAAGGAGTCCTAATTGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTTTCAATGCTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATCGGTGAATGGTCATTATGGGTTATTTAGAGAAAAGAAGATCAATAGGGA
CGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGACGGTTGCCATAAAAGCTAAAGAAGCTGCAAAAG
CGTTAGATCTGTCCTTCTCCTTCCCTTCACCAAACGCATGCACACCAAAGAACACTGCAGTTACAAAAAGGAGTCCTAATTGGCCATAA
Protein sequenceShow/hide protein sequence
MPFSMLFNAISKEVSLNDMKSVNGHYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKTVAIKAKEAAKALDLSFSFPSPNACTPKNTAVTKRSPNWP