; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033141 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033141
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr11:41168864..41169922
RNA-Seq ExpressionLag0033141
SyntenyLag0033141
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]2.5e-11169.36Show/hide
Query:  PISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDME
        P S+ H NREVWS NLR+ELELLNEYLPEFP+V ID EFPGFL   PKG+SEEEFY CLRFNVNRL+ILQLGLTL +Q G+I +TWEFNFR FD +SDME
Subjt:  PISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDME

Query:  GVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNG
         VSSLDSFLKNKGFDF KL+  GIA E+FT LFLPICRSG+I RWITFHG YDI YL+KLL I+S+  SMA FA  AQ LLGT+ DLK+MAR+CDGLL+G
Subjt:  GVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNG

Query:  ELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRV------HVLTPPPP-PPKCSLSSFARSSPVFVG
         LGL KLAK+LDVKRI  AHFA SD+L T SVY KMK  FKL  EQCEGFLYGLP+ I   + V        +TPPPP P K S+ SF  S+P+ VG
Subjt:  ELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRV------HVLTPPPP-PPKCSLSSFARSSPVFVG

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]1.3e-11565.56Show/hide
Query:  EKTTGEPPIS--LSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYECLRFN
        EKT G+ P +    H+NREVWSYNL +ELE+LNEYLPEFPIVAIDTEF                             PGFLRY PKGVSEEEFY+CLRFN
Subjt:  EKTTGEPPIS--LSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYECLRFN

Query:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN
        VNRL+ILQLGLTL NQNG++ +TWEFNFR FD ISDMEGVSSLDSFLKNKGFDF KL+ DGIA E+FT LFLPICRSGRI+RWITFHG YDIAYL+KLL 
Subjt:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN

Query:  IRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALR
        I+ +  SMA FAA AQ LLGT+ DLK+M R+CDGLL+G+LGL KLAK+LDVKRIG AHFAGSDSLLTA+VY KMK  FK+  EQ EGFLYGLPHRI+A +
Subjt:  IRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALR

Query:  RVHVLTPP----PPPPKCSLSSFARSSPVFV
         +  +  P    PPPP+     F    P F+
Subjt:  RVHVLTPP----PPPPKCSLSSFARSSPVFV

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]2.0e-10069.47Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF
        REVWS+NL +E+EL+  YL EFPIVAIDTEFPGFLR+ PKGVS+EEFY+CL+FNVNRLSILQLGLTLT+ NG IG+TWEFNF+ FD+IS+MEGV SLDSF
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA
        LKNKGF+F KLR+ GIAP+EF+  F P+ RSGRI +WITFHG YDIAYLMK  NI SM TSM++FA  A  LLGT+ DLK+MAR+ D L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA

Query:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP
        K+L + R+GTAHFAGSDSLLTASVY KMK   K+ P+  EGFLYGLP+ I+  R   V+  P
Subjt:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]9.8e-10068.48Show/hide
Query:  KTTGEPPISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD
        K  GE  I      R+VWS+NL +E+EL+ + L EFPIVAIDTEFPGFLR+ PKGVS+EEFYECL+FNVNRLSILQLGLTLTN NG IG+TWEFNFR FD
Subjt:  KTTGEPPISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD

Query:  RISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC
        +IS+MEGV SLDSFLKNKGF+F  LR+ GIAPEEF   F PI RSGRI RWITFHG YDIAYLMK  NIR M TSM+IFA  A  +LGT+ DLK+MA + 
Subjt:  RISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP
          LL+G LGL KLAK+L V R GTAHFAGSDSLLTASVY KMK   K+ P   EGFLYGLP+ I+  RR  V+  P
Subjt:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]5.2e-10170.23Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF
        REVWSYNL +E+EL+  YL EFPIVA+DTEFPGFLR+ PKGVS+EEFY+CL+FNVNRLSILQLGLTL ++NG IG+TWEFNF+ FD+IS+MEGV SLDSF
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA
        LKNKGF+F KLR+ GIAPEEF+  F P+ RS RI RWITFHG YDIAYLMK  NI SM TSM++FA  A  LLGT+ DLK+MAR+ D L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA

Query:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP
        K+L + RIGTAHFAGSDSLLTASVY KMK   K+ P+  EGFLYGLP+ I+  RR  V+  P
Subjt:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease1.2e-11169.36Show/hide
Query:  PISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDME
        P S+ H NREVWS NLR+ELELLNEYLPEFP+V ID EFPGFL   PKG+SEEEFY CLRFNVNRL+ILQLGLTL +Q G+I +TWEFNFR FD +SDME
Subjt:  PISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDME

Query:  GVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNG
         VSSLDSFLKNKGFDF KL+  GIA E+FT LFLPICRSG+I RWITFHG YDI YL+KLL I+S+  SMA FA  AQ LLGT+ DLK+MAR+CDGLL+G
Subjt:  GVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNG

Query:  ELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRV------HVLTPPPP-PPKCSLSSFARSSPVFVG
         LGL KLAK+LDVKRI  AHFA SD+L T SVY KMK  FKL  EQCEGFLYGLP+ I   + V        +TPPPP P K S+ SF  S+P+ VG
Subjt:  ELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRV------HVLTPPPP-PPKCSLSSFARSSPVFVG

A0A6J1DLA5 Poly(A)-specific ribonuclease6.2e-11665.56Show/hide
Query:  EKTTGEPPIS--LSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYECLRFN
        EKT G+ P +    H+NREVWSYNL +ELE+LNEYLPEFPIVAIDTEF                             PGFLRY PKGVSEEEFY+CLRFN
Subjt:  EKTTGEPPIS--LSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYECLRFN

Query:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN
        VNRL+ILQLGLTL NQNG++ +TWEFNFR FD ISDMEGVSSLDSFLKNKGFDF KL+ DGIA E+FT LFLPICRSGRI+RWITFHG YDIAYL+KLL 
Subjt:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN

Query:  IRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALR
        I+ +  SMA FAA AQ LLGT+ DLK+M R+CDGLL+G+LGL KLAK+LDVKRIG AHFAGSDSLLTA+VY KMK  FK+  EQ EGFLYGLPHRI+A +
Subjt:  IRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALR

Query:  RVHVLTPP----PPPPKCSLSSFARSSPVFV
         +  +  P    PPPP+     F    P F+
Subjt:  RVHVLTPP----PPPPKCSLSSFARSSPVFV

A0A6J1ESM7 Poly(A)-specific ribonuclease9.6e-10169.47Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF
        REVWS+NL +E+EL+  YL EFPIVAIDTEFPGFLR+ PKGVS+EEFY+CL+FNVNRLSILQLGLTLT+ NG IG+TWEFNF+ FD+IS+MEGV SLDSF
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA
        LKNKGF+F KLR+ GIAP+EF+  F P+ RSGRI +WITFHG YDIAYLMK  NI SM TSM++FA  A  LLGT+ DLK+MAR+ D L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA

Query:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP
        K+L + R+GTAHFAGSDSLLTASVY KMK   K+ P+  EGFLYGLP+ I+  R   V+  P
Subjt:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP

A0A6J1HIZ7 Poly(A)-specific ribonuclease3.1e-9970.23Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF
        R+VWS+NL +E+EL+ + L EFPIVA+DTEFPGFLR+ PKGVS+EEFYECL+FNVNRLSILQLGLTLTN NG IG+TWEFNF+ FD+IS+MEGV SLDSF
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA
        LKNKGF+F  LR+ GIAPEEF   F PI RSGRI RWITFHG YDIAYLMKL NI  M TSM+IFA  A  LLGT+ DLK+MAR  + L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGLNKLA

Query:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP
        K+L V R GTAHFAGSDSLLTASVY KMK   K+  +  EGFLYGLP+ I+  RR  V+  P
Subjt:  KMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP

A0A6J1HL76 Poly(A)-specific ribonuclease4.7e-10068.48Show/hide
Query:  KTTGEPPISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD
        K  GE  I      R+VWS+NL +E+EL+ + L EFPIVAIDTEFPGFLR+ PKGVS+EEFYECL+FNVNRLSILQLGLTLTN NG IG+TWEFNFR FD
Subjt:  KTTGEPPISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD

Query:  RISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC
        +IS+MEGV SLDSFLKNKGF+F  LR+ GIAPEEF   F PI RSGRI RWITFHG YDIAYLMK  NIR M TSM+IFA  A  +LGT+ DLK+MA + 
Subjt:  RISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP
          LL+G LGL KLAK+L V R GTAHFAGSDSLLTASVY KMK   K+ P   EGFLYGLP+ I+  RR  V+  P
Subjt:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPP

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 92.0e-4237.26Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFL-RYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDI---------GITWEFNFRGFDRISD
        REVW+ NL  E EL++E + ++P +++DTEFPG + +   +  + ++ Y  L+ NV+ LS++Q+GLTL++ NG++         G  WEFNFR FD   D
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFL-RYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDI---------GITWEFNFRGFDRISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLP---ICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLG-TIVDLKYMARFC
             S++  L+ +G DFE+   DG+  E F  L +    +C       W+TFH +YD  YLMK+L  R +  ++  F    + L G  + D+K+M +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLP---ICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLG-TIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKR-IGTAHFAGSDSLLTASVYVKMKTTFKL--SPEQCEGFLYGL
        +  L G  GL+++A+ L+V R +G  H AGSDSLLT   + +M+  + +   PE+  G LYGL
Subjt:  DGLLNGELGLNKLAKMLDVKR-IGTAHFAGSDSLLTASVYVKMKTTFKL--SPEQCEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.8e-4337.5Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF
        REVW++NL QE+ L+ + + +FP VA+DTEFPG +           P  +  E  Y+ L+ NVN L ++QLGLTL+++ G++          W+FNFR F
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF

Query:  DRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMA
        + ISDM  + S++  L+    D EK    G+  + F  L +   +  + +I  W+TFH  YD  YL+KLL+ + +   ++ F    ++    + D+KY+ 
Subjt:  DRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMA

Query:  RFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKL-SPEQCEGFLYGL
         FC  L     GL K+A++L VKR+G +H AGSDSLLT   ++KMK  F   S  +  GFL+GL
Subjt:  RFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKL-SPEQCEGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.6e-4439.46Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD
        REVW+ NL++E++L+ + + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL
        + L     GLNKLA++L+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 15.1e-4335.92Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF
        R VW  N+ +E+  + E L  FP++A DTE+PG +       S +E Y  ++ NV    ++Q G TL N  G+IG  WE NF  F   SD     S++ F
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLP----ICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGL
        L+  G D +K+R++G+  + F   F P    + RS +   ++TF G+YD AY + +LN   +  +   FA    ++ G + D K MA FC+G L   LGL
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLP----ICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGL

Query:  NKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPPPPPPKCSLSSFARSSPVF
        +KLA++L + R+G AH AGSDSL+TA V++K+K  ++ S     G +YG+              P P  P     + A S PVF
Subjt:  NKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPPPPPPKCSLSSFARSSPVF

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.3e-4238.93Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKG---VSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG--------ITWEFNFRGFDRIS
        REVW+ NL  E+ L+ E + +FP VA+DTEFPG +   P G    + E  YE L+ NVN L ++QLGLT +++ G++           W+FNFR FD  S
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKG---VSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG--------ITWEFNFRGFDRIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARF
        D+    S++  L+  G DF K    GI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  +   F          + D+K++ +F
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARF

Query:  CDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKL-SPEQCEGFLYGL
        C+ L     GLNKLA++LDV+R+G  H AGSDSLLT+  + K++  F + S E+  G LYGL
Subjt:  CDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKL-SPEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-4435.92Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF
        R VW  N+ +E+  + E L  FP++A DTE+PG +       S +E Y  ++ NV    ++Q G TL N  G+IG  WE NF  F   SD     S++ F
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDRISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLP----ICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGL
        L+  G D +K+R++G+  + F   F P    + RS +   ++TF G+YD AY + +LN   +  +   FA    ++ G + D K MA FC+G L   LGL
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLP----ICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDGLLNGELGL

Query:  NKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPPPPPPKCSLSSFARSSPVF
        +KLA++L + R+G AH AGSDSL+TA V++K+K  ++ S     G +YG+              P P  P     + A S PVF
Subjt:  NKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPPPPPPKCSLSSFARSSPVF

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-4437.5Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF
        REVW++NL QE+ L+ + + +FP VA+DTEFPG +           P  +  E  Y+ L+ NVN L ++QLGLTL+++ G++          W+FNFR F
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF

Query:  DRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMA
        + ISDM  + S++  L+    D EK    G+  + F  L +   +  + +I  W+TFH  YD  YL+KLL+ + +   ++ F    ++    + D+KY+ 
Subjt:  DRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMA

Query:  RFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKL-SPEQCEGFLYGL
         FC  L     GL K+A++L VKR+G +H AGSDSLLT   ++KMK  F   S  +  GFL+GL
Subjt:  RFCDGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKL-SPEQCEGFLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-4539.46Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD
        REVW+ NL++E++L+ + + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL
        + L     GLNKLA++L+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-4539.46Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD
        REVW+ NL++E++L+ + + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL
        + L     GLNKLA++L+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-4539.46Show/hide
Query:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD
        REVW+ NL++E++L+ + + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYECLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDRISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFC

Query:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL
        + L     GLNKLA++L+V+R+G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSP-EQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGATCGAACGGGAAAAGGTCTTACAGGAATCGGAGAGTCGAGCCGGAGAAGACGACCGGAGAACCGCCGATCAGTCTCAGTCATCGGAATCGAGAGGTTTGGTC
TTACAACCTCCGCCAAGAGTTAGAGCTTCTGAACGAGTATCTCCCAGAATTTCCCATCGTCGCCATCGATACAGAATTTCCAGGGTTTCTCCGATACGCTCCAAAAGGTG
TTTCGGAGGAAGAATTCTACGAGTGTCTTCGATTCAATGTGAACCGATTGAGCATACTCCAACTCGGTCTCACACTCACCAACCAGAACGGAGACATCGGAATCACTTGG
GAGTTCAATTTCAGAGGTTTCGATCGCATTTCTGATATGGAAGGGGTTTCTTCGCTCGATTCGTTCCTGAAGAACAAGGGCTTCGATTTCGAAAAATTGAGAAATGACGG
AATCGCGCCAGAGGAATTCACTGCCCTGTTTCTTCCGATCTGTCGCAGTGGTCGAATCGATCGATGGATCACCTTCCATGGATCCTACGACATCGCTTACCTCATGAAGC
TTCTCAATATCAGATCCATGGCGACCTCCATGGCGATTTTCGCAGCCAACGCGCAGCAATTGTTGGGAACGATCGTCGATCTCAAGTACATGGCTCGCTTTTGCGACGGT
TTGCTCAACGGCGAGTTAGGGCTAAATAAACTGGCCAAAATGCTCGACGTTAAGCGAATCGGCACTGCACATTTCGCTGGTTCTGATAGTTTGCTCACGGCTTCTGTTTA
TGTGAAGATGAAGACGACGTTCAAGCTTTCGCCGGAGCAATGTGAGGGGTTTCTGTACGGATTGCCTCACCGGATTCGAGCTCTCCGACGAGTACATGTACTGACTCCGC
CACCGCCGCCGCCGAAATGCTCGTTATCGTCTTTCGCCAGATCGTCGCCGGTGTTTGTCGGCGATTTTCTTATCGTTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGATCGAACGGGAAAAGGTCTTACAGGAATCGGAGAGTCGAGCCGGAGAAGACGACCGGAGAACCGCCGATCAGTCTCAGTCATCGGAATCGAGAGGTTTGGTC
TTACAACCTCCGCCAAGAGTTAGAGCTTCTGAACGAGTATCTCCCAGAATTTCCCATCGTCGCCATCGATACAGAATTTCCAGGGTTTCTCCGATACGCTCCAAAAGGTG
TTTCGGAGGAAGAATTCTACGAGTGTCTTCGATTCAATGTGAACCGATTGAGCATACTCCAACTCGGTCTCACACTCACCAACCAGAACGGAGACATCGGAATCACTTGG
GAGTTCAATTTCAGAGGTTTCGATCGCATTTCTGATATGGAAGGGGTTTCTTCGCTCGATTCGTTCCTGAAGAACAAGGGCTTCGATTTCGAAAAATTGAGAAATGACGG
AATCGCGCCAGAGGAATTCACTGCCCTGTTTCTTCCGATCTGTCGCAGTGGTCGAATCGATCGATGGATCACCTTCCATGGATCCTACGACATCGCTTACCTCATGAAGC
TTCTCAATATCAGATCCATGGCGACCTCCATGGCGATTTTCGCAGCCAACGCGCAGCAATTGTTGGGAACGATCGTCGATCTCAAGTACATGGCTCGCTTTTGCGACGGT
TTGCTCAACGGCGAGTTAGGGCTAAATAAACTGGCCAAAATGCTCGACGTTAAGCGAATCGGCACTGCACATTTCGCTGGTTCTGATAGTTTGCTCACGGCTTCTGTTTA
TGTGAAGATGAAGACGACGTTCAAGCTTTCGCCGGAGCAATGTGAGGGGTTTCTGTACGGATTGCCTCACCGGATTCGAGCTCTCCGACGAGTACATGTACTGACTCCGC
CACCGCCGCCGCCGAAATGCTCGTTATCGTCTTTCGCCAGATCGTCGCCGGTGTTTGTCGGCGATTTTCTTATCGTTAGCTAA
Protein sequenceShow/hide protein sequence
MKRSNGKRSYRNRRVEPEKTTGEPPISLSHRNREVWSYNLRQELELLNEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYECLRFNVNRLSILQLGLTLTNQNGDIGITW
EFNFRGFDRISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNIRSMATSMAIFAANAQQLLGTIVDLKYMARFCDG
LLNGELGLNKLAKMLDVKRIGTAHFAGSDSLLTASVYVKMKTTFKLSPEQCEGFLYGLPHRIRALRRVHVLTPPPPPPKCSLSSFARSSPVFVGDFLIVS