CuGenDBv2

Gene ID	Lag0033173
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transcription initiation factor IIF subunit alpha
Genome location	chr11:41424612..41430020
RNA-Seq Expression	Lag0033173
Synteny	Lag0033173
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0005674 - transcription factor TFIIF complex (cellular component) GO:0001096 - TFIIF-class transcription factor complex binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	IPR008851 - Transcription initiation factor IIF, alpha subunit IPR011039 - Transcription Factor IIF, Rap30/Rap74, interaction IPR036388 - Winged helix-like DNA-binding domain superfamily IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606328.1 Transcription initiation factor IIF subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-275

95.01

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Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDKDSVGA+GR  GRRKPTSDENEGN SDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDI+KGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD-DDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPS
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE++ DDDDDAEEESGGTPV PSKQKD VKEEA A+SPS
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD-DDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPS

Query:  KPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK
        KP PSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETESKSTDEGVSTS+STASK AAASVKTEPAS SGPVTEEEIRAVLRQRTPVTTQDLVAK
Subjt:  KPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK

Query:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        FKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]

1.9e-273

93.89

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDK++VG SGR  GRRK T DENEGN SDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD +E++GGTPV+PSKQKDTVKEEA A+SPSK
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK

Query:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETESK+TDEGV TSKSTASK A ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]

2.1e-275

95.19

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Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDKDSVGA+GR  GRRKPTSDENEGN SDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEG RGG+HDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPS
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+DDDDDDAEEESGGTPV PSKQKD VKEEA A+SPS
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPS

Query:  KPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK
        KP PSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETESKSTDEGVSTS+STASK AAASVKTEPAS SGPVTEEEIRAVLRQRTPVTTQDLVAK
Subjt:  KPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK

Query:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        FKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_023532767.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita pepo subsp. pepo]

1.5e-273

94.46

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        M  DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDKDSVGA+GR  GRRKPTSD+NEGN SDRGE DEEEEAARKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE--DDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSP
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLL+RTGGLNDSDGE  DDDDDDDAEEESGGTPV PSKQKD VKEEA A+SP
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE--DDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSP

Query:  SKPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVA
        SKP PSGS KGT STAK+AKGKRKNGEDVKPSSAP KKMKTETESKSTDEGVSTS+STASK AAASVKTEPAS SGPVTEEEIRAVLRQRTPVTTQDLVA
Subjt:  SKPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVA

Query:  KFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]

2.3e-274

94.63

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDL+LKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYK+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDK+ VG SGR  GRRKPT DENEGN SDRGEEDEEEEA RKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK
        ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD +E++GGTPV+PSKQKDTVKEEA A+SPSK
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK

Query:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETESKSTDE VSTSKSTASK A A VKTEPAS SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA6 Transcription initiation factor IIF subunit alpha

9.3e-274

93.89

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDK++VG SGR  GRRK T DENEGN SDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD +E++GGTPV+PSKQKDTVKEEA A+SPSK
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK

Query:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETESK+TDEGV TSKSTASK A ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLR+ EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha

1.0e-272

93.7

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDK++VG SGR  GRRK T DENEGN SDRGEEDEEEEAARKNRLGL+KKGGGDDDDEEG RGGDHDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDD +E++GGTPV+PSKQKDTVKEEA A+SPSK
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK

Query:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETE K TDEGV TSKSTASK A ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        KARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Subjt:  KARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha

1.2e-268

93.16

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDKD+VGASGR  GRRK T DENEGNASDRGEEDEEEEAARKNRLGLNKK  GDDDDEEG RGGDHD+DDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK
        ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD EE+ GGTPVV SKQKDTVKEEA ASSPSK
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSK

Query:  PTPSGSTKGTPSTAKSAKGKRK-NGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK
        P PSGS+KGTPS+ K++KGKRK NG+DVKPS+ P KK+KTET+SKSTDEGVSTSKSTASK A ASVKTE A  SGPVTEEEIRAVLRQRTPVTTQDLVAK
Subjt:  PTPSGSTKGTPSTAKSAKGKRK-NGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK

Query:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha

9.9e-276

95.19

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD
        GPAAFGEVEKFDDKDSVGA+GR  GRRKPTSDENEGN SDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEG RGG+HDLDDDDIEKGDDWEHEEIFTDDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDD

Query:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPS
        ETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+DDDDDDAEEESGGTPV PSKQKD VKEEA A+SPS
Subjt:  ETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPS

Query:  KPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK
        KP PSGS KGTPSTAK+AKGKRKNGEDVKPSSAP KKMKTETESKSTDEGVSTS+STASK AAASVKTEPAS SGPVTEEEIRAVLRQRTPVTTQDLVAK
Subjt:  KPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAK

Query:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        FKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  FKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha

6.0e-273

94.12

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATVTRLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEK-GDDWEHEEIFTDD
        GPAAFGEVEKFDDKDS+GA+GR  GRRKPTSDENEGN SDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEG RGGDHDLDDDDIE  GDDWEHEEIFTDD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEK-GDDWEHEEIFTDD

Query:  DETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPAS
        DETTAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDG   EDDDDDDDAEEESGGTPV PSKQKD VKEEA A+
Subjt:  DETTAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPAS

Query:  SPSKPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDL
        SPSKP PSGS KGT STAK+AKGKRKNGEDVKPSSAP KKMKTETESKSTDEG+STS+STASK AAASVKTEPAS SGPVTEEEIRAVLRQRTPVTTQDL
Subjt:  SPSKPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDL

Query:  VAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
        VAKFKARLRS EDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
Subjt:  VAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

SwissProt top hits

e value

%identity

Alignment

Q54WV4 General transcription factor IIF subunit 1

2.5e-10

27.08

Show/hide

Query:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKF
        K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ LT EEAE+ MK + +  D +                 ++K 
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKF

Query:  DDKDSVGASGRGGGRRKPTSDENEGNASDRGE---------EDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET
         D    G+ G     +K   +  E    +R E         E+++++ A   R     +G G+D D         D DDD    GD        T +DE 
Subjt:  DDKDSVGASGRGGGRRKPTSDENEGNASDRGE---------EDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKD-----TVKEEAPASS
           + EE ED+        E+K+    + ++N+ E  L+    + K     TGG +D D ++DD+D D ++ S    V      D     +VK+E     
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKD-----TVKEEAPASS

Query:  PSKPTPSGSTKGTPSTAKSAKGK-RKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDL
         SK +     K   S+ KS + K +KN  D    +  SKK+K E  S    +  S S+    +        +P     P TEE I+ VL++   V + DL
Subjt:  PSKPTPSGSTKGTPSTAKSAKGK-RKNGEDVKPSSAPSKKMKTETESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDL

Query:  VAKFKARLRSQEDKNAFAEILRRISRIQKTNG
        +  FK  L++ ++K  F  ++  ++R+ + NG
Subjt:  VAKFKARLRSQEDKNAFAEILRRISRIQKTNG

Q9SU25 Transcription initiation factor IIF subunit alpha

1.2e-182

68.18

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  VTRLIREYNVRA+A +DKNYFIGRF++GLPNF  K+ +ENKWSL K+  
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN
        QGRQ TDA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAANN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANN

Query:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTS--DENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTD
        GPA FGEV+  ++K+S G SG GG  RK +S  DE EGN SDRG+EDEEEEA+RK+RLGLN+K   DDDDEEG RGGD D+DDDDIEKGDDWEHEEIFTD
Subjt:  GPAAFGEVEKFDDKDSVGASGRGGGRRKPTS--DENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTD

Query:  DDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASS
        DDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSKSGKELKKLL +  GL++SD +DDDD DD EE + GT V  SKQK+  KEE   ++
Subjt:  DDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASS

Query:  PSKPTPSGSTKGTPSTAKSAKGKRK--NGEDVKPSSAPSKKMKTETESKST---DEGVSTSKS-TASKAAAASVKTEPASGS----GPVTEEEIRAVLRQ
        P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE + KS+   +   + SKS T +KA  A   + PAS S    GPVTE+EIRAVL +
Subjt:  PSKPTPSGSTKGTPSTAKSAKGKRK--NGEDVKPSSAPSKKMKTETESKST---DEGVSTSKS-TASKAAAASVKTEPASGS----GPVTEEEIRAVLRQ

Query:  RTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK
        +  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++VVLR+
Subjt:  RTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRK

Arabidopsis top hits

e value

%identity

Alignment

AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

1.9e-117

66.42

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKFDDKDSVGASGRGGGRRKPTS--DENEGNASDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAANNGPA FGEV+  ++K+S G SG GG  RK +S  DE EGN SDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKFDDKDSVGASGRGGGRRKPTS--DENEGNASDRGE

Query:  EDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK
        EDEEEEA+RK+RLGLN+K   DDDDEEG RGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSKPTPSGSTKGTPSTAKSAKGKRK--NGEDVKPSSAPSKKMKTE
        SGKELKKLL +  GL++SD +DDDD DD EE + GT V  SKQK+  KEE   ++P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSKPTPSGSTKGTPSTAKSAKGKRK--NGEDVKPSSAPSKKMKTE

Query:  TESKST---DEGVSTSKS-TASKAAAASVKTEPASGS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSY
         + KS+   +   + SKS T +KA  A   + PAS S    GPVTE+EIRAVL ++  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TESKST---DEGVSTSKS-TASKAAAASVKTEPASGS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

1.9e-117

66.42

Show/hide

Query:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKFDDKDSVGASGRGGGRRKPTS--DENEGNASDRGE
        +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAANNGPA FGEV+  ++K+S G SG GG  RK +S  DE EGN SDRG+
Subjt:  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKFDDKDSVGASGRGGGRRKPTS--DENEGNASDRGE

Query:  EDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK
        EDEEEEA+RK+RLGLN+K   DDDDEEG RGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDEDDE+ E E EGGLSK
Subjt:  EDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEDDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSKPTPSGSTKGTPSTAKSAKGKRK--NGEDVKPSSAPSKKMKTE
        SGKELKKLL +  GL++SD +DDDD DD EE + GT V  SKQK+  KEE   ++P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSKPTPSGSTKGTPSTAKSAKGKRK--NGEDVKPSSAPSKKMKTE

Query:  TESKST---DEGVSTSKS-TASKAAAASVKTEPASGS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSY
         + KS+   +   + SKS T +KA  A   + PAS S    GPVTE+EIRAVL ++  VTTQDLV++FKARL+++EDKNAFA ILR+IS+IQK  G  ++
Subjt:  TESKST---DEGVSTSKS-TASKAAAASVKTEPASGS----GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSY

Query:  VVLRK
        VVLR+
Subjt:  VVLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCATTCGATTTGCTGCTGAAGCCATCGTGCAGTGGATGCGGATCCACGACGGAGTTGTACGGGAGCAATTGCAAGCACATGACATTGTGCTTGACCTGTGGCAAAAC
GATGGCGGAGAACAAGGGCAAATGTTATGACTGTGGCGCTACTGTAACTCGCTTAATAAGAGAATATAATGTTCGAGCAAGTGCGAGCAGCGACAAGAACTACTTCATTG
GTAGGTTCATGAGTGGGCTGCCAAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAGCTTACTGATGCCCTGCGG
GAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACGGGCCAATTTCAATTCCAAGGTCATCTTGAGGGTTCACAATCAGCAACGTATTACTTGCTTGTATTGCA
AGGAAAGGAATTTACTGCTATTCCGGCAGGTTCTTGGTACAACTTCAACAAAGTGGCACAATATAAACAACTTACATTGGAGGAGGCAGAAGAGAAAATGAAGAATCGAA
AGAAAACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAATAATGGTCCGGCTGCATTTGGAGAAGTTGAGAAGTTTGATGACAAAGATAGCGTTGGTGCTAGT
GGTAGGGGAGGAGGACGCAGAAAGCCTACTAGTGATGAGAATGAGGGTAATGCCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGG
ACTCAATAAAAAGGGTGGTGGCGATGATGATGATGAGGAAGGGGCTAGGGGAGGTGACCATGACTTGGACGATGATGATATTGAGAAAGGAGATGATTGGGAGCACGAAG
AGATTTTTACTGATGATGATGAAACTACTGCTCCGGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCAGCACCTCCAGAAATCAAGCAGGATGAAGACGATGAG
GATGAAGAAAATGAAGGGGAAGGGGGCCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTACTTAGGCGTACTGGAGGGCTTAATGATTCAGATGGAGAGGATGACGACGA
CGATGATGATGCAGAAGAGGAGAGTGGTGGCACTCCAGTTGTGCCTTCGAAGCAAAAGGATACAGTTAAAGAAGAAGCTCCAGCCAGCAGTCCCTCAAAACCAACACCTT
CTGGATCTACGAAGGGAACCCCTTCTACTGCAAAGTCAGCAAAGGGGAAAAGAAAAAATGGCGAGGATGTGAAACCATCCAGTGCACCTTCAAAGAAAATGAAAACAGAG
ACGGAATCGAAGTCTACAGATGAAGGCGTGTCTACTTCTAAAAGTACAGCCTCGAAAGCTGCAGCAGCATCAGTCAAAACAGAACCAGCATCGGGTTCTGGGCCCGTTAC
CGAGGAAGAAATTAGGGCTGTTTTGCGGCAAAGGACACCTGTTACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTACGATCACAAGAGGACAAGAATGCTTTTG
CAGAAATACTGAGGAGAATTTCGAGGATTCAAAAGACGAATGGAGGACCGAGTTATGTCGTGTTGAGAAAACCTGAAGACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALR
EKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAANNGPAAFGEVEKFDDKDSVGAS
GRGGGRRKPTSDENEGNASDRGEEDEEEEAARKNRLGLNKKGGGDDDDEEGARGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEDDE
DEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDAEEESGGTPVVPSKQKDTVKEEAPASSPSKPTPSGSTKGTPSTAKSAKGKRKNGEDVKPSSAPSKKMKTE
TESKSTDEGVSTSKSTASKAAAASVKTEPASGSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRSQEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED

Lag0033173 (gene) of Sponge gourd (AG-4) v1 genome