; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033174 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033174
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr11:41432489..41433025
RNA-Seq ExpressionLag0033174
SyntenyLag0033174
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606329.1 Protein LATE FLOWERING, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6374.59Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA
        MEDEE+ LQVAE+SSVEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+SSS+       P  +FA S   HHP +L HPMYIA
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA

Query:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        AHGA+LHCFPN+QQ+FYDGLG  PKFE+MVYYGGVCS NRY QCGE+E++VLNWQ+SIKK       DKE+EQKLDLSLHL
Subjt:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

XP_022931139.1 protein LATE FLOWERING [Cucurbita moschata]1.4e-6375.14Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA
        MEDEE+ LQVAE+SSVEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+SDY+SSSS      P S +FA +   HHP +L HP+YIA
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA

Query:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        AHGANLHCFPNNQQ+FYDGLG  PKFE+MVYYGGVCS NRY QCGE+E +VLNWQ+SIKK       DKE+EQKLDLSLHL
Subjt:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

XP_022996351.1 protein LATE FLOWERING-like [Cucurbita maxima]6.3e-6474.59Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA
        MEDEE+ LQVAE+SSVEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+SSS+       P  +FA +   HHP +L HPMYIA
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA

Query:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        AHG NLHCFPN+QQ+FYDGLG  PKFE+MVYYGGVCS NRY QCGE+E+NVLNWQ+SIKK       DKE+EQKLDLSLHL
Subjt:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

XP_023532770.1 protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]1.1e-6374.59Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA
        MEDEE+ L VAE+SSVEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+SSS+       P  +FA S   HHP +L HPMYIA
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA

Query:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        AHGANLHCFPN+QQ+FYDGLG  PKFE+MVYYGGVCS NRY QCGE+E++VLNWQ+SIKK       DKE+EQKLDLSLHL
Subjt:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

XP_038888938.1 protein LATE FLOWERING [Benincasa hispida]6.7e-6675.54Show/hide
Query:  MEDEEKHLQVAETSS--VEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASS-SSPPPP-PPPPSFIFAASH--HHPGLLAHP
        ME EEK  QVAET++  VEMEE P+RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDY+++ SSPP P P PPS +F ASH  HHPGLL  P
Subjt:  MEDEEKHLQVAETSS--VEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASS-SSPPPP-PPPPSFIFAASH--HHPGLLAHP

Query:  MYIAAHGANLHCFPNNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        +YIA HG NLHCFPNNQQL Y        ENMVY GGVC+SNRYHQCG +E+N+LNW++SIKKDLSRI+HDKE+EQKLDLSLHL
Subjt:  MYIAAHGANLHCFPNNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

TrEMBL top hitse value%identityAlignment
A0A0A0LE19 C2H2-type domain-containing protein1.6e-5775.46Show/hide
Query:  MEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAAS--HHHPGLLAHPMYIAAHGANLHCFPNNQQLFY
        MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY S S P P P P S +FAAS   HHPGLL HP+YIA HGANLHCFPNNQQL Y
Subjt:  MEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAAS--HHHPGLLAHPMYIAAHGANLHCFPNNQQLFY

Query:  DGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
                ENMV+ GGVC SNRYHQ   +E+N+LNW+++IKKDLSRI+HDKE+EQKLDLSLHL
Subjt:  DGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

A0A1S3BIU8 protein LATE FLOWERING-like1.5e-5567.37Show/hide
Query:  MEDEEKHLQVAETSS---------VEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAAS---HHHP
        ME EE   +V E  +         +EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY S S P P   P S +FAAS   HH  
Subjt:  MEDEEKHLQVAETSS---------VEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAAS---HHHP

Query:  GLLAHPMYIAAHGANLHCFPNNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        GLL HP+YIA HGANLHCFPNNQQL Y        ENMV+ GGVCSSNRYHQ   +E+N+LNW+++IK DLSRI+HDKE+EQKLDLSLHL
Subjt:  GLLAHPMYIAAHGANLHCFPNNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

A0A6J1E329 protein LATE FLOWERING1.1e-5871.35Show/hide
Query:  MEDEEKHLQVAETSSVEM--EEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSP---PPPPPPPSFIFAASHHHPGLLAHPM
        MEDEEK  QV E+S+ EM  EEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRIS YA ++ P   PPPPPPP  IFAAS  H GL   PM
Subjt:  MEDEEKHLQVAETSSVEM--EEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSP---PPPPPPPSFIFAASHHHPGLLAHPM

Query:  YI----AAHGANLHCFPNNQQLFYDGLG-----APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        YI    AAH ++ HCFPNNQ L  DGLG     APKFENMVYYG     +RY Q GE+EQNVLNWQ+S+KK++SRIDHDKE+E+KLDLSLHL
Subjt:  YI----AAHGANLHCFPNNQQLFYDGLG-----APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

A0A6J1ETH7 protein LATE FLOWERING6.8e-6475.14Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA
        MEDEE+ LQVAE+SSVEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKR+SDY+SSSS      P S +FA +   HHP +L HP+YIA
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA

Query:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        AHGANLHCFPNNQQ+FYDGLG  PKFE+MVYYGGVCS NRY QCGE+E +VLNWQ+SIKK       DKE+EQKLDLSLHL
Subjt:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

A0A6J1K4H5 protein LATE FLOWERING-like3.0e-6474.59Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA
        MEDEE+ LQVAE+SSVEMEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRISDY+SSS+       P  +FA +   HHP +L HPMYIA
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASH--HHPGLLAHPMYIA

Query:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
        AHG NLHCFPN+QQ+FYDGLG  PKFE+MVYYGGVCS NRY QCGE+E+NVLNWQ+SIKK       DKE+EQKLDLSLHL
Subjt:  AHGANLHCFPNNQQLFYDGLG-APKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 21.1e-0753.85Show/hide
Query:  AETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAK---RISDYASSSSPPP
        + T+S    E P RVF C +C RKF SSQALGGHQNAHK ERT A+K++   R S+   S  P P
Subjt:  AETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAK---RISDYASSSSPPP

Q39263 Zinc finger protein 41.0e-0856Show/hide
Query:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        E    +   +  RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

Q39266 Zinc finger protein 71.5e-0740.37Show/hide
Query:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAH----PMYIAAHGANLHCF
        +T S + E  P RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P      S    A   H GLL H    P  + +   +   F
Subjt:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAH----PMYIAAHGANLHCF

Query:  PNNQQLFYD
         N   LF+D
Subjt:  PNNQQLFYD

Q9FFX4 Zinc finger protein KNUCKLES6.6e-0873.53Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

Q9FKA9 Protein LATE FLOWERING2.7e-1736.11Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAHPMYIAAH
        +E EE+     E +  +      R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+ +++        P F+ + S HH  +L +P      
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAHPMYIAAH

Query:  GANLHCFP--NNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
         A++ CFP  +     +   G+       + G  C       C ++  ++L+   ++      ++ DK ++Q LDLSLHL
Subjt:  GANLHCFP--NNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.1e-0840.37Show/hide
Query:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAH----PMYIAAHGANLHCF
        +T S + E  P RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P      S    A   H GLL H    P  + +   +   F
Subjt:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAH----PMYIAAHGANLHCF

Query:  PNNQQLFYD
         N   LF+D
Subjt:  PNNQQLFYD

AT1G66140.1 zinc finger protein 47.3e-1056Show/hide
Query:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI
        E    +   +  RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Subjt:  ETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein4.7e-0973.53Show/hide
Query:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK
        R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Subjt:  RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK

AT5G48890.1 C2H2-like zinc finger protein1.9e-1836.11Show/hide
Query:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAHPMYIAAH
        +E EE+     E +  +      R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+ +++        P F+ + S HH  +L +P      
Subjt:  MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAHPMYIAAH

Query:  GANLHCFP--NNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL
         A++ CFP  +     +   G+       + G  C       C ++  ++L+   ++      ++ DK ++Q LDLSLHL
Subjt:  GANLHCFP--NNQQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL

AT5G57520.1 zinc finger protein 28.1e-0953.85Show/hide
Query:  AETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAK---RISDYASSSSPPP
        + T+S    E P RVF C +C RKF SSQALGGHQNAHK ERT A+K++   R S+   S  P P
Subjt:  AETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAK---RISDYASSSSPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGAGGAAAAGCACTTACAAGTAGCTGAAACCAGCAGTGTTGAAATGGAAGAAATCCCATCAAGAGTCTTCCCCTGTTTGTTCTGTTCAAGGAAGTTCCAAAG
CTCTCAAGCCTTGGGAGGCCATCAAAATGCTCACAAGAAAGAGCGGACCGCCGCGAGGAAGGCCAAGCGGATATCCGACTACGCGTCGTCGTCGTCGCCACCGCCGCCAC
CGCCGCCGCCGTCATTCATTTTTGCAGCTAGCCACCATCATCCAGGGCTATTGGCACATCCAATGTACATTGCAGCTCATGGGGCTAATCTTCATTGTTTCCCCAATAAC
CAACAACTGTTCTATGATGGCTTGGGAGCTCCCAAGTTTGAGAACATGGTTTATTATGGTGGGGTTTGTTCAAGCAATAGATATCATCAATGTGGGGAAGAGGAACAAAA
TGTGTTGAATTGGCAAAAAAGCATAAAGAAAGATCTTAGTAGGATAGATCATGACAAGGAACAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATGAGGAAAAGCACTTACAAGTAGCTGAAACCAGCAGTGTTGAAATGGAAGAAATCCCATCAAGAGTCTTCCCCTGTTTGTTCTGTTCAAGGAAGTTCCAAAG
CTCTCAAGCCTTGGGAGGCCATCAAAATGCTCACAAGAAAGAGCGGACCGCCGCGAGGAAGGCCAAGCGGATATCCGACTACGCGTCGTCGTCGTCGCCACCGCCGCCAC
CGCCGCCGCCGTCATTCATTTTTGCAGCTAGCCACCATCATCCAGGGCTATTGGCACATCCAATGTACATTGCAGCTCATGGGGCTAATCTTCATTGTTTCCCCAATAAC
CAACAACTGTTCTATGATGGCTTGGGAGCTCCCAAGTTTGAGAACATGGTTTATTATGGTGGGGTTTGTTCAAGCAATAGATATCATCAATGTGGGGAAGAGGAACAAAA
TGTGTTGAATTGGCAAAAAAGCATAAAGAAAGATCTTAGTAGGATAGATCATGACAAGGAACAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG
Protein sequenceShow/hide protein sequence
MEDEEKHLQVAETSSVEMEEIPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYASSSSPPPPPPPPSFIFAASHHHPGLLAHPMYIAAHGANLHCFPNN
QQLFYDGLGAPKFENMVYYGGVCSSNRYHQCGEEEQNVLNWQKSIKKDLSRIDHDKEQEQKLDLSLHL