CuGenDBv2

Gene ID	Lag0033197
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Genome location	chr11:41614206..41616974
RNA-Seq Expression	Lag0033197
Synteny	Lag0033197
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021883 - Protein LOW PSII ACCUMULATION 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131239.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia]

2.7e-164

88.1

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMANISS NN G PP  P   SHNAHNF+ Y+  CC VH KTV F  GP LAESLR LQ  RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+ +LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAF+SSEPFTE+LLERGV+VVPFATD SSLNFEFDERE++KD+TT+RKRLWRLTPVYMPEWSAWLDEQKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022963501.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]

4.5e-164

87.8

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNA N +  +R CCHVHR  VSF FGP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TT+RKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022967293.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima]

7.7e-164

87.5

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNAHN +  +R CCHVHR  VSF FGP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPES IMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TT+RKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_023554665.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo]

1.3e-163

87.5

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNA N +  +R CCHVHR  VSF FGP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TT+RKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_038888898.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]

1.6e-161

88.62

Show/hide

Query:  LSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF
        LS  NISSCNNI RPP     H     +F+  +R CCHVHRKT+SF   P L +SL SL + RRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF
Subjt:  LSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF

Query:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
        YLTFIASGTLGGLIATTQLLAALAN SRAE+VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
Subjt:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC

Query:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
        AGPESFIMEAFKSSEPFTERLLERGVLVVP ATD S+LNFEFDEREEVKD+TT+RKRLWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
Subjt:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG

Query:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L902 Uncharacterized protein

1.1e-155

86.06

Show/hide

Query:  NISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
        +ISS NNI  PP      SHNA +F+  +R  C VHRKTVSF   PRL  SLR L + RRNLANF CSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
Subjt:  NISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF

Query:  IASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPE
        IASGTLGGLIATTQLL ALAN SRA++VPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIARLVICAGPE
Subjt:  IASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPE

Query:  SFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVG
        SFI+EAFKSSEPFTERLLERGVLVVP ATD ++LNFEFD+REEVKD+TT+RKRLWRLTPVYM EWSAWLDEQKKLAGV+SDSPVYLSLRMDGRVRGSGVG
Subjt:  SFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVG

Query:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A5D3BG35 Protein LOW PSII ACCUMULATION 1

9.2e-155

85.03

Show/hide

Query:  LSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF
        LS   +SS NNI  PP      SHNA +F+  +R C HVHRKTVSF   PRL  SLR   + RRNLAN+  SAADKPEISSTAKIRSEVLSPFRSVRMFF
Subjt:  LSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF

Query:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
        YLTFIASGTLGGLIATTQLL ALAN SRA++VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
Subjt:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC

Query:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
        AGPESF++EAFKSSEPFTE+LLERGVLVVP ATD ++LNFEFDEREEVKD+T++RK+LWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
Subjt:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG

Query:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1BP58 protein LOW PSII ACCUMULATION 1, chloroplastic

1.3e-164

88.1

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMANISS NN G PP  P   SHNAHNF+ Y+  CC VH KTV F  GP LAESLR LQ  RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+ +LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAF+SSEPFTE+LLERGV+VVPFATD SSLNFEFDERE++KD+TT+RKRLWRLTPVYMPEWSAWLDEQKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HGA1 protein LOW PSII ACCUMULATION 1, chloroplastic

2.2e-164

87.8

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNA N +  +R CCHVHR  VSF FGP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TT+RKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HWD0 protein LOW PSII ACCUMULATION 1, chloroplastic

3.7e-164

87.5

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNAHN +  +R CCHVHR  VSF FGP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPES IMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TT+RKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

SwissProt top hits

e value

%identity

Alignment

Q9SRY4 Protein LOW PSII ACCUMULATION 1, chloroplastic

2.3e-30

30.94

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A ++ +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTQRKRLWR
        +V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP                      AT   S+  +FD R +  V     + +  ++
Subjt:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTQRKRLWR

Query:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein

1.7e-31

30.94

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A ++ +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTQRKRLWR
        +V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP                      AT   S+  +FD R +  V     + +  ++
Subjt:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTQRKRLWR

Query:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

AT4G28740.1 FUNCTIONS IN: molecular_function unknown

4.3e-104

62.95

Show/hide

Query:  YQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAE
        ++R   H HR+ + F          R  Q       N  C AAD+P EIS+ A+IRSEVLSPFRSVRMFFYL FIASG+LGGLIAT++L+ ALANP+R+ 
Subjt:  YQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAE

Query:  DVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVV
        +V +I+KGLG+D GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ NKVI +  LRG+ARLVICAGP  FI EAFK S+ +T+ L+ERGV+VV
Subjt:  DVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVV

Query:  PFATDASSLNFEFDEREEV-KDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDG
         +ATD +S   EFDE +   ++++ +RK+LWR+TPV++PEW  WL+EQKKLA VSSDSPVYLSLR+DGRVR SGVGYPPW A VAQLPPVKG+W+GLLDG
Subjt:  PFATDASSLNFEFDEREEV-KDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDG

Query:  MDGRV
        MDGRV
Subjt:  MDGRV

Sequences

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CDS sequence

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ATGGTGCTTTCCATGGCGAACATTTCCTCCTGCAACAACATTGGTCGACCTCCACAAATTCCTTCTCTTCACAGCCACAACGCTCACAATTTCGAGGTCTATCAACGTTT
CTGCTGCCATGTTCATCGGAAGACAGTCTCGTTTCCTTTTGGCCCTAGGCTAGCGGAGTCGCTTCGTTCCCTGCAGCACACGAGACGGAATTTAGCTAACTTCACTTGCT
CCGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTCCTCTCTCCTTTTCGGTCGGTTCGGATGTTCTTTTATCTCACTTTCATTGCCAGTGGT
ACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGCTGCATTGGCAAATCCATCAAGAGCTGAAGATGTCCCTGATATTCTAAAAGGACTTGGAATAGACTTCGGAGC
TGTAGCTCTTTTTGCATTTCTTTATTTCAGAGAGAACAATGCAAAAAATGCTCAATTGGCAAGACTATCGAGAGAAGAAAGCCTTTCCAATCTAAAGCTTCGAGTGGACC
AAAACAAAGTTATTCCTATTAGCACTCTCCGTGGGATTGCTCGTCTGGTTATTTGTGCTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAGTGAACCGTTCACT
GAACGACTTCTCGAACGGGGCGTGTTAGTCGTACCCTTTGCCACGGATGCTAGTTCACTGAATTTTGAGTTTGATGAACGTGAAGAGGTGAAGGATCTAACCACCCAAAG
AAAAAGACTGTGGCGGTTGACTCCAGTTTACATGCCTGAGTGGTCGGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCTCCTCTGATTCTCCTGTCTATCTATCTC
TGCGAATGGATGGCCGTGTTCGTGGTAGCGGCGTTGGCTATCCTCCATGGAATGCTCTTGTTGCACAATTACCACCTGTTAAAGGACTATGGTCAGGTCTTCTAGATGGA
ATGGATGGGAGAGTTCTTTGA

mRNA sequence

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Protein sequence

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MVLSMANISSCNNIGRPPQIPSLHSHNAHNFEVYQRFCCHVHRKTVSFPFGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASG
TLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPESFIMEAFKSSEPFT
ERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTQRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDG
MDGRVL

Lag0033197 (gene) of Sponge gourd (AG-4) v1 genome