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Lag0033271 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033271
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr11:42309292..42310043
RNA-Seq ExpressionLag0033271
SyntenyLag0033271
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4361659.1 hypothetical protein G4B88_015282 [Cannabis sativa]5.8e-0437.18Show/hide
Query:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV
        S  C IC+SC E  +H ++ C   KS+W  S     ++SL   S   +L  L   +S  +FEL IVF W +W+ RN +
Subjt:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV

KAF4390261.1 hypothetical protein F8388_019916 [Cannabis sativa]5.8e-0437.18Show/hide
Query:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV
        S  C IC+SC E  +H ++ C   KS+W  S     ++SL   S   +L  L   +S  +FEL IVF W +W+ RN +
Subjt:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV

TXG71533.1 hypothetical protein EZV62_000112 [Acer yangbiense]1.8e-0537.5Show/hide
Query:  CVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNEN
        C IC   PE  LH +W CS +K L C   FA+   SL  + F   + +   ++    FELL + WW VW+ RN  + N N
Subjt:  CVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNEN

TrEMBL top hitse value%identityAlignment
A0A2N9EZP7 Uncharacterized protein6.3e-0430.49Show/hide
Query:  CVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNENFD
        C  C S PE  +HV+W C     +W   +  S   +  G SF  L+W   D  ++++ EL  +  W +W  RN    N+  D
Subjt:  CVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNENFD

A0A5C7IQ65 RNase H domain-containing protein8.8e-0637.5Show/hide
Query:  CVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNEN
        C IC   PE  LH +W CS +K L C   FA+   SL  + F   + +   ++    FELL + WW VW+ RN  + N N
Subjt:  CVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNEN

A0A7J6EVE0 zf-RVT domain-containing protein2.8e-0437.18Show/hide
Query:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV
        S  C IC+SC E  +H ++ C   KS+W  S     ++SL   S   +L  L   +S  +FEL IVF W +W+ RN +
Subjt:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV

A0A7J6H5V2 zf-RVT domain-containing protein2.8e-0437.18Show/hide
Query:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV
        S  C IC+SC E  +H ++ C   KS+W  S     ++SL   S   +L  L   +S  +FEL IVF W +W+ RN +
Subjt:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFV

A0A803LHY5 Uncharacterized protein4.8e-0439.76Show/hide
Query:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSF-DSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNE
        + LC  C    E  LH ++ CS VKS+W  S FA +       SF D LLW L  KVS+  F L +   W  W +RN V++ E
Subjt:  SSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSF-DSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTTCTAGCTTATGTGTGATTTGTCATTCTTGTCCTGAGGACTGTCTGCATGTTGTCTGGGAATGTTCTATGGTTAAATCCCTGTGGTGCTGTTCAAAGTTTGC
ATCCGTATACAAATCTTTGTCTGGTTTGAGCTTCGATTCTCTGTTGTGGGCTTTAAAGGATAAAGTTAGTAGGCTGAATTTTGAGCTATTGATTGTTTTCTGGTGGACGG
TATGGAATTTTCGTAATTTTGTTTTGTGGAATGAGAATTTTGATGCGGTCGGCCCTGGGAGGTTTGAAGCAGATCCCGTCGACTGGTGTGCAGTAGGTGCCGCCGGGTGG
AGCTACTGTGGTGTGGGTTCCTCCTCCGATGAAGGAACTAAAGTTGAATGTGGATGCTGCAGTGAGGCCCGAGACTGGGCAGCTTGCGGCGGGTTTGTATTGCGTAATGA
GAGGGGGAGTTTTCATGTTGAGACCGACTCGATGCGATTATCGAAAGTGTTGACAGAAGATGTGGACGATATTTCGGAAGTGGGAGTGATCATGGACAACATTCGAGGCA
TACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTTCTAGCTTATGTGTGATTTGTCATTCTTGTCCTGAGGACTGTCTGCATGTTGTCTGGGAATGTTCTATGGTTAAATCCCTGTGGTGCTGTTCAAAGTTTGC
ATCCGTATACAAATCTTTGTCTGGTTTGAGCTTCGATTCTCTGTTGTGGGCTTTAAAGGATAAAGTTAGTAGGCTGAATTTTGAGCTATTGATTGTTTTCTGGTGGACGG
TATGGAATTTTCGTAATTTTGTTTTGTGGAATGAGAATTTTGATGCGGTCGGCCCTGGGAGGTTTGAAGCAGATCCCGTCGACTGGTGTGCAGTAGGTGCCGCCGGGTGG
AGCTACTGTGGTGTGGGTTCCTCCTCCGATGAAGGAACTAAAGTTGAATGTGGATGCTGCAGTGAGGCCCGAGACTGGGCAGCTTGCGGCGGGTTTGTATTGCGTAATGA
GAGGGGGAGTTTTCATGTTGAGACCGACTCGATGCGATTATCGAAAGTGTTGACAGAAGATGTGGACGATATTTCGGAAGTGGGAGTGATCATGGACAACATTCGAGGCA
TACTTTGA
Protein sequenceShow/hide protein sequence
MNFSSLCVICHSCPEDCLHVVWECSMVKSLWCCSKFASVYKSLSGLSFDSLLWALKDKVSRLNFELLIVFWWTVWNFRNFVLWNENFDAVGPGRFEADPVDWCAVGAAGW
SYCGVGSSSDEGTKVECGCCSEARDWAACGGFVLRNERGSFHVETDSMRLSKVLTEDVDDISEVGVIMDNIRGIL