; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033323 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033323
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L24
Genome locationchr11:42758688..42762696
RNA-Seq ExpressionLag0033323
SyntenyLag0033323
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449336.1 PREDICTED: 50S ribosomal protein L24 [Cucumis melo]1.0e-8195.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRG+ ASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYD KTGKGMP+L
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_022146016.1 uncharacterized protein LOC111015327 [Momordica charantia]1.1e-8398.11Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDP TGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_022931187.1 uncharacterized protein LOC111437445 [Cucurbita moschata]3.2e-8396.86Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDP TGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEK+YDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_028774016.1 uncharacterized protein LOC114731056 [Prosopis alba]1.3e-8193.71Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWK+LRGDNVMIIRGKDKGETG+IKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAP+H SNVQVVDPVTGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRVSRG+GASGSIIPRPEILKIRT+PRPTVAGPKDTPMD+VLEKTYDAKTG+GMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

XP_038889029.1 50S ribosomal protein L24 [Benincasa hispida]7.1e-8397.48Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPR EILKIRT+PRPTVAGPKDTPMDVVLEKTYDAKTGKGMP+L
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

TrEMBL top hitse value%identityAlignment
A0A1S3BL65 50S ribosomal protein L244.9e-8295.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRG+ ASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYD KTGKGMP+L
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A6J1CYB5 uncharacterized protein LOC1110153275.3e-8498.11Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIR+QNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDP TGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A6J1EXQ8 uncharacterized protein LOC1114374451.5e-8396.86Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDP TGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEK+YDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

A0A6J1K0T3 uncharacterized protein LOC1114913631.5e-8396.86Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDP TGKPCKVG+RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRGIGASGSIIPRPEILKIRT+PRPTVAGPKDTPMDVVLEK+YDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

B5AJV4 Ribosomal protein L244.9e-8295.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG+IKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        SKVRVSRG+ ASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYD KTGKGMP+L
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

SwissProt top hitse value%identityAlignment
A8F2D6 50S ribosomal protein L241.1e-2252.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

C3PP96 50S ribosomal protein L241.1e-2251.46Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Q4UMR8 50S ribosomal protein L246.5e-2352.43Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G NLVKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Q92GX7 50S ribosomal protein L241.1e-2251.46Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V++I GK KG+ G I +V    ++VIV G N+VKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Q9ZCR6 50S ribosomal protein L248.5e-2351.46Show/hide
Query:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG
        K+ +GD V+II GK KG+ G + +V   +N V+V G NLVKKH K  +  EGGI T E+P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASG

Query:  SII
         II
Subjt:  SII

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein6.6e-7986.79Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETG IKRVIR+QNRVIVEGKNL+KKHIK G  HEGGIFTVEAPLH SNVQVVDPVTG+PCKVG++YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL
        +KVRV+RG G SGSIIPRPEILKIR +PRPT AGPKDTPM+ V E+TYDAKTGKGMPDL
Subjt:  SKVRVSRGIGASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL

AT5G54600.1 Translation protein SH3-like family protein4.1e-1234.58Show/hide
Query:  GDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASGSII
        GD V +I G+DKG+ G + ++    + ++++  NL  KH+K + +G  G I  +EAP+H SNV +         +VG + LEDG KVR     G     I
Subjt:  GDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASGSII

Query:  PRPEILK
         + ++LK
Subjt:  PRPEILK

AT5G54600.2 Translation protein SH3-like family protein2.0e-0632.08Show/hide
Query:  GDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASGSIIP
        GD V +I G+DKG+ G + ++  T N  I                  G I  +EAP+H SNV +         +VG + LEDG KVR     G     I 
Subjt:  GDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIGASGSIIP

Query:  RPEILK
        + ++LK
Subjt:  RPEILK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTTATTAGACACTGGAAAATTCTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTCTAATTAAGCG
TGTCATTCGCACTCAAAATCGTGTTATTGTCGAGGGGAAAAACCTGGTGAAGAAACATATTAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACGGTTGAAGCTCCCC
TCCATGTATCGAATGTTCAAGTTGTTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTATTAGATATCTTGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGAATTGGA
GCCTCAGGTTCTATTATCCCTCGTCCAGAGATCTTAAAGATAAGGACTTCTCCCAGACCTACAGTTGCTGGCCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATGCTAAAACAGGGAAGGGCATGCCTGACCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTTATTAGACACTGGAAAATTCTTAGAGGAGATAATGTGATGATCATTAGAGGCAAGGATAAAGGAGAAACTGGTCTAATTAAGCG
TGTCATTCGCACTCAAAATCGTGTTATTGTCGAGGGGAAAAACCTGGTGAAGAAACATATTAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACGGTTGAAGCTCCCC
TCCATGTATCGAATGTTCAAGTTGTTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTATTAGATATCTTGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGAATTGGA
GCCTCAGGTTCTATTATCCCTCGTCCAGAGATCTTAAAGATAAGGACTTCTCCCAGACCTACAGTTGCTGGCCCCAAGGATACTCCAATGGATGTGGTGCTGGAGAAAAC
TTATGATGCTAAAACAGGGAAGGGCATGCCTGACCTTTAA
Protein sequenceShow/hide protein sequence
MGWKAAEKLIRHWKILRGDNVMIIRGKDKGETGLIKRVIRTQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVVDPVTGKPCKVGIRYLEDGSKVRVSRGIG
ASGSIIPRPEILKIRTSPRPTVAGPKDTPMDVVLEKTYDAKTGKGMPDL