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Lag0033362 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033362
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA exonuclease 4
Genome locationchr11:43029201..43029569
RNA-Seq ExpressionLag0033362
SyntenyLag0033362
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155663.1 apoptosis-enhancing nuclease isoform X1 [Momordica charantia]4.7e-3787.36Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDI+QGVHDPYENCVSVMRLYKRMR+LDHHGQVM  ++A PH QY AHNLDSHS KDLEKMTPD+LYEMSRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

XP_022155665.1 apoptosis-enhancing nuclease isoform X2 [Momordica charantia]4.7e-3787.36Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDI+QGVHDPYENCVSVMRLYKRMR+LDHHGQVM  ++A PH QY AHNLDSHS KDLEKMTPD+LYEMSRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

XP_022995660.1 apoptosis-enhancing nuclease [Cucurbita maxima]4.4e-3583.91Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDIRQGVHDPYENCVS MRLYKRMRSL+HHGQV T  IAPP  QY +H+LDS+SAKDLEKMTPD LYE+SRSNFKCWCLDSR VMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

XP_023533248.1 uncharacterized protein LOC111795196 isoform X1 [Cucurbita pepo subsp. pepo]4.4e-3582.76Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDIRQGVHDPYENCVS MRLYKRMRSL+HHG+V T  I+PP  +Y AH+LDS+SAKDLEKMTPD LYE+SRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

XP_023533253.1 RNA exonuclease 4-like isoform X3 [Cucurbita pepo subsp. pepo]4.4e-3582.76Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDIRQGVHDPYENCVS MRLYKRMRSL+HHG+V T  I+PP  +Y AH+LDS+SAKDLEKMTPD LYE+SRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

TrEMBL top hitse value%identityAlignment
A0A6J1DN23 RNA exonuclease 42.3e-3787.36Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDI+QGVHDPYENCVSVMRLYKRMR+LDHHGQVM  ++A PH QY AHNLDSHS KDLEKMTPD+LYEMSRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

A0A6J1DNJ6 RNA exonuclease 42.3e-3787.36Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDI+QGVHDPYENCVSVMRLYKRMR+LDHHGQVM  ++A PH QY AHNLDSHS KDLEKMTPD+LYEMSRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

A0A6J1ETD0 RNA exonuclease 42.8e-3583.91Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDIRQGVHDPYENCVS MRLYKRMRSL+HHG V T  IAPP  QY AH++DS+SAKDLEKMTPD LYE+SRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

A0A6J1EYI8 RNA exonuclease 42.8e-3583.91Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDIRQGVHDPYENCVS MRLYKRMRSL+HHG V T  IAPP  QY AH++DS+SAKDLEKMTPD LYE+SRSNFKCWCLDSRRVMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

A0A6J1K8M7 RNA exonuclease 42.1e-3583.91Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT
        YDIRQGVHDPYENCVS MRLYKRMRSL+HHGQV T  IAPP  QY +H+LDS+SAKDLEKMTPD LYE+SRSNFKCWCLDSR VMQT
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein3.9e-1345Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLD
        Y I+ G H+ YE+CVS MRLYKRMR  +H    + S  A      + + L+S    DLEKM  ++LY+ S S ++CWCLD
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLD

AT2G48100.2 Exonuclease family protein3.9e-1345Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLD
        Y I+ G H+ YE+CVS MRLYKRMR  +H    + S  A      + + L+S    DLEKM  ++LY+ S S ++CWCLD
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLD

AT2G48100.3 Exonuclease family protein3.9e-1345Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLD
        Y I+ G H+ YE+CVS MRLYKRMR  +H    + S  A      + + L+S    DLEKM  ++LY+ S S ++CWCLD
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLD

AT3G27970.1 Exonuclease family protein2.5e-1241.67Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSA---KDLEKMTPDQLYEMSRSNFKCWCLDS
        YD+  G+ DPYE+CV+ MRLY RMR   H        I       DA N  +  A    + E+M+PD++  +SRS++ CWCLDS
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSA---KDLEKMTPDQLYEMSRSNFKCWCLDS

AT5G40310.1 Exonuclease family protein1.3e-1343.21Show/hide
Query:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDS
        YDI  G+ DPYE+CV+ MRLY RMR   H  +    +     TQ + +N  +    +LE+M+P++L ++SRS++ CWCLDS
Subjt:  YDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTAGAAAATGGGAGAATGTTGTCATGGTATGATATTCGGCAGGGTGTGCACGACCCCTATGAAAATTGTGTATCAGTGATGCGATTGTACAAGAGAATGCGTAG
TCTTGATCATCATGGACAAGTTATGACATCGTCAATTGCTCCTCCCCATACCCAGTATGATGCTCACAATCTTGATTCCCATAGTGCAAAAGATCTTGAGAAGATGACTC
CAGATCAACTTTATGAGATGTCAAGATCAAACTTCAAGTGTTGGTGTCTTGACTCGAGACGAGTAATGCAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTAGAAAATGGGAGAATGTTGTCATGGTATGATATTCGGCAGGGTGTGCACGACCCCTATGAAAATTGTGTATCAGTGATGCGATTGTACAAGAGAATGCGTAG
TCTTGATCATCATGGACAAGTTATGACATCGTCAATTGCTCCTCCCCATACCCAGTATGATGCTCACAATCTTGATTCCCATAGTGCAAAAGATCTTGAGAAGATGACTC
CAGATCAACTTTATGAGATGTCAAGATCAAACTTCAAGTGTTGGTGTCTTGACTCGAGACGAGTAATGCAGACTTAG
Protein sequenceShow/hide protein sequence
MWVENGRMLSWYDIRQGVHDPYENCVSVMRLYKRMRSLDHHGQVMTSSIAPPHTQYDAHNLDSHSAKDLEKMTPDQLYEMSRSNFKCWCLDSRRVMQT