; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033363 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033363
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA exonuclease 4
Genome locationchr11:43040131..43042102
RNA-Seq ExpressionLag0033363
SyntenyLag0033363
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013087 - Zinc finger C2H2-type
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931094.1 uncharacterized protein LOC111437384 isoform X1 [Cucurbita moschata]2.5e-14491.24Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SL  HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQP IPITNYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

XP_022931095.1 RNA exonuclease 4 isoform X2 [Cucurbita moschata]2.5e-14491.24Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SL  HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQP IPITNYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

XP_022995660.1 apoptosis-enhancing nuclease [Cucurbita maxima]1.5e-14491.24Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SLS HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQPQIPI NYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLR+NGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

XP_023533248.1 uncharacterized protein LOC111795196 isoform X1 [Cucurbita pepo subsp. pepo]1.7e-14591.97Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SLS HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

XP_023533251.1 RNA exonuclease 4-like isoform X2 [Cucurbita pepo subsp. pepo]1.7e-14591.97Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SLS HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

TrEMBL top hitse value%identityAlignment
A0A6J1DN23 RNA exonuclease 41.7e-13092.18Show/hide
Query:  MRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSK+F+EQGCGLCLRVLDGRRSL+EH+ IC LTAPVHQGTSLLPTDLSDCYDEDRSDR LGA
Subjt:  MRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPVHQGTSLLPTDLSDCYDEDRSDRGLGA

Query:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE
        IAMDCVMAGGGSDGTLDLCV +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKV RIL+NGESIGRLRLNGG+ARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLT TYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

A0A6J1DNJ6 RNA exonuclease 41.7e-14392.78Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPVHQGTSL
        RHKCSACYKQYKKKEHLIEHM+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSK+F+EQGCGLCLRVLDGRRSL+EH+ IC LTAPVHQGTSL
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPVHQGTSL

Query:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGES
        LPTDLSDCYDEDRSDR LGAIAMDCVMAGGGSDGTLDLCV +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKV RIL+NGES
Subjt:  LPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGES

Query:  IGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        IGRLRLNGG+ARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLT TYLG
Subjt:  IGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

A0A6J1ETD0 RNA exonuclease 41.2e-14491.24Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SL  HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQP IPITNYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

A0A6J1EYI8 RNA exonuclease 41.2e-14491.24Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SL  HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQP IPITNYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

A0A6J1K8M7 RNA exonuclease 47.1e-14591.24Show/hide
Query:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR
        MA S  +KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVC+KHCKSFESLREHLNGPLSKSNCSK+FLEQGCGLCLRVLD R SLS HQ ICR
Subjt:  MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICR

Query:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE
        LTAPV QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLD+C+ ICLVDEDEKLIFNTFVQPQIPI NYRHEVTGLTEE +RYAMPLKEVQE
Subjt:  LTAPVHQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQE

Query:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        KV +ILLNGE+I RLR+NGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLT TYLG
Subjt:  KVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 43.9e-1535.71Show/hide
Query:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE
        IAMDC   G G +G      RI +V+    ++ + FV+P+  +  +R  V+G+  EHM+ A+  KE Q+K   IL              + R+LVGH L+
Subjt:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMK
        HDL+ L +++P  +LRDT+R+ P  K
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMK

Q4IEV5 RNA exonuclease 46.0e-1634.03Show/hide
Query:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE
        IA+DC M G G  G      R+ +VD     I++++V+P+  +TN+R  V+G++++ MR+A   +EVQ ++ ++L              + R+LVGHDL+
Subjt:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTGTYLG
        HDL+ L +++P   +RDTA++    K  N    SL+ L    LG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTGTYLG

Q6BIK6 RNA exonuclease 42.3e-1532.17Show/hide
Query:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE
        +AMDC   G G +GT     R+ +V+     +F+ FV+P+  +T++R  V+G+T +HM  A+  +E Q +  ++L              + R+LVGH + 
Subjt:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNL-VSHSLKYLTGTYL
        HDLD L +++P   +RDT++Y P    ++  + SLK L+  +L
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNL-VSHSLKYLTGTYL

Q6CMT3 RNA exonuclease 42.5e-1432.14Show/hide
Query:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE
        ++MDC   G G DG      R+ +V+    ++ + FV+P+ P+T++R  V+G+   HM  A+  ++ Q++V  +L              K R+LVGH + 
Subjt:  IAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLT
        HDL  L +++P  M+RDT+R+ P  +  +   + SLK LT
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLT

Q9GZR2 RNA exonuclease 41.5e-1432.88Show/hide
Query:  AIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDL
        A+A+DC M G G  G   +  R+ +V++  K +++ +V+P  P+T+YR  V+G+  E+++    L+ VQ++V  +L              K R+LVGH L
Subjt:  AIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGGKARLLVGHDL

Query:  EHDLDCLRMNYPDHMLRDTARYHPLMKTNLVS--HSLKYLTGTYLG
         +DL  L +++P   +RDT +Y P  K+ + S   SL+ L+   LG
Subjt:  EHDLDCLRMNYPDHMLRDTARYHPLMKTNLVS--HSLKYLTGTYLG

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein8.1e-8555.02Show/hide
Query:  KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGP--LSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPV
        K  +RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  +F ++GC LCL++ +   +L+EH+  C L+ P 
Subjt:  KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGP--LSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPV

Query:  HQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRI
          GTS      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  MPL+ V+E+VF  
Subjt:  HQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRI

Query:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT +YLG
Subjt:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

AT2G48100.2 Exonuclease family protein8.1e-8555.02Show/hide
Query:  KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGP--LSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPV
        K  +RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  +F ++GC LCL++ +   +L+EH+  C L+ P 
Subjt:  KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGP--LSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPV

Query:  HQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRI
          GTS      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  MPL+ V+E+VF  
Subjt:  HQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRI

Query:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT +YLG
Subjt:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

AT2G48100.3 Exonuclease family protein8.1e-8555.02Show/hide
Query:  KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGP--LSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPV
        K  +RH+C ACYK + ++EHL+EHM++SYHS+HQPRCGVC KHCKSFES+REHLN P  LSK NC  +F ++GC LCL++ +   +L+EH+  C L+ P 
Subjt:  KECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGP--LSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPV

Query:  HQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRI
          GTS      S       +   L A+A+DC M GGG+DGT+D C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGLT+E ++  MPL+ V+E+VF  
Subjt:  HQGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRI

Query:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        L  G++ G  RL      LLVGHDL HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT +YLG
Subjt:  LLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

AT3G27970.1 Exonuclease family protein1.4e-8151.8Show/hide
Query:  TSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLT
        +S  S E LR+KC+ACY+Q+ K EHL+EHM++SYHS H+P CGVC+KHC+SFESLREHL GPL K  C  +F  +GC  C+ +L+   S   HQ  C+ +
Subjt:  TSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLT

Query:  APVHQG--TSLLPTDLSD----CYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLK
        + V+ G  T +    L D     Y   RS R    +A+ C M GGGSDG+LDLC R+C+ DE + +IF+T+V+P + +T+YR+E TG+  E++R AMPLK
Subjt:  APVHQG--TSLLPTDLSD----CYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLK

Query:  EVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
        +VQ K+   L NGE + ++R  GGKAR+LVGH L+HDLD L++ YP  M+RDTA+Y PLMKT+ +S+SLKYLT  YLG
Subjt:  EVQEKVFRILLNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG

AT5G40310.1 Exonuclease family protein3.7e-7750Show/hide
Query:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLT-----APVH
        R+KC  CY+Q+ KKEHL+EHMR+SYHSVH+P CG+C KHC+SF+SLREHL GPL K  C  +F  +GC  CL +L+   +   HQ  C+L+       + 
Subjt:  RHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLT-----APVH

Query:  QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRIL
             L  + +  Y   RS R    +A+ C M GGGSDG+LDLC R+C+ DE E ++F+T+V+P IP+TNYR+E+TG+  E++R AM LK  Q KV   L
Subjt:  QGTSLLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRIL

Query:  LNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG
         NGE + ++R   GKAR+LVGH L++ LD L++ Y   M+RDTA Y PLMK++ +S+SLKYLT  YLG
Subjt:  LNGESIGRLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCGACCATCTCCAAAGAATGTCTAAGACATAAATGCTCTGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATTGAGCATATGAGAGTTTCATATCA
CTCTGTTCATCAGCCTAGATGTGGGGTCTGCCGAAAGCACTGCAAATCATTTGAATCGTTGAGGGAACATCTAAACGGTCCACTTTCAAAATCAAATTGTTCAAAAGTTT
TTTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGCCGCAGATCTCTCAGTGAGCACCAAGGAATTTGCCGCCTAACAGCACCTGTTCACCAAGGAACAAGT
CTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGCGGTGGAAGTGATGGCACATT
GGACCTTTGTGTTAGGATCTGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTTGTGCAACCACAAATACCTATCACGAATTACAGGCATGAAGTTACTGGGC
TAACGGAAGAACATATGAGGTATGCGATGCCACTGAAAGAAGTCCAAGAAAAAGTATTCAGAATCTTGTTAAATGGAGAATCCATTGGGAGATTGAGACTGAATGGTGGT
AAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCTGATCATATGTTAAGGGACACTGCTAGATATCATCCATTGATGAA
AACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTGGAACATATTTGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCGACCATCTCCAAAGAATGTCTAAGACATAAATGCTCTGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATTGAGCATATGAGAGTTTCATATCA
CTCTGTTCATCAGCCTAGATGTGGGGTCTGCCGAAAGCACTGCAAATCATTTGAATCGTTGAGGGAACATCTAAACGGTCCACTTTCAAAATCAAATTGTTCAAAAGTTT
TTTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGCCGCAGATCTCTCAGTGAGCACCAAGGAATTTGCCGCCTAACAGCACCTGTTCACCAAGGAACAAGT
CTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGATCGAGGCCTTGGAGCAATAGCTATGGATTGTGTAATGGCTGGCGGTGGAAGTGATGGCACATT
GGACCTTTGTGTTAGGATCTGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTTGTGCAACCACAAATACCTATCACGAATTACAGGCATGAAGTTACTGGGC
TAACGGAAGAACATATGAGGTATGCGATGCCACTGAAAGAAGTCCAAGAAAAAGTATTCAGAATCTTGTTAAATGGAGAATCCATTGGGAGATTGAGACTGAATGGTGGT
AAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCTGATCATATGTTAAGGGACACTGCTAGATATCATCCATTGATGAA
AACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTGGAACATATTTGGGGTAA
Protein sequenceShow/hide protein sequence
MATSTISKECLRHKCSACYKQYKKKEHLIEHMRVSYHSVHQPRCGVCRKHCKSFESLREHLNGPLSKSNCSKVFLEQGCGLCLRVLDGRRSLSEHQGICRLTAPVHQGTS
LLPTDLSDCYDEDRSDRGLGAIAMDCVMAGGGSDGTLDLCVRICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVFRILLNGESIGRLRLNGG
KARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTGTYLG