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Lag0033540 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033540
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:170387..171701
RNA-Seq ExpressionLag0033540
SyntenyLag0033540
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66198.1 hypothetical protein [Beta vulgaris subsp. vulgaris]1.6e-2449.59Show/hide
Query:  LTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVIERIRHKL
        LTHLQFADDT+LF+ ++ +AL+N+ + + LF+++SGL INF KSELLGI++    ++       CK GS+P TYLG+P+ GS     FW P+IE+I  KL
Subjt:  LTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVIERIRHKL

Query:  HNWKYSFISKGGRHTLIQSTL
          WK + +S GGR TLI+++L
Subjt:  HNWKYSFISKGGRHTLIQSTL

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]2.8e-2646.1Show/hide
Query:  HLFSRLGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLR
        HL   LG      IG  R+ ++HLQFADDT+ F   D    +NL E++ LF   SGL IN AK  + GI+    K++ +   +GC+ GSWP  YLGLPL 
Subjt:  HLFSRLGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLR

Query:  GSSKGSQFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTL
        G  K   FW PV+E++  +L +WK +F+SKGGR TLIQ  L
Subjt:  GSSKGSQFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTL

XP_021852823.1 uncharacterized protein LOC110792319 [Spinacia oleracea]5.9e-2442.97Show/hide
Query:  GNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVIE
        G    ++THLQ+ADDT++F   D K+L N+ +++ LF +ASGL +NF KS + G++ +NS ++       CK G++P TYLGLP+ G+S     W+P+I+
Subjt:  GNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVIE

Query:  RIRHKLHNWKYSFISKGGRHTLIQSTLS
        +++ KL +WK + +S GGR TLI+++LS
Subjt:  RIRHKLHNWKYSFISKGGRHTLIQSTLS

XP_028058587.1 uncharacterized protein LOC114262434 [Camellia sinensis]5.9e-2435.96Show/hide
Query:  LGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKG
        LG I    +G+  + LTHLQFADDTLLF   +   + N+  I++ FE+ SGL INF KS L G+ I  ++ +    KF C+    P  YLGLPL  + K 
Subjt:  LGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKG

Query:  SQFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLSKTNEWVSLSHLLSSIKTQAIDDTWSWSIDSSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVY
         + WQPV+++++ KL  WK   +S GGR TLI+S LS         + LS  K           +    A T+  L    +  S     K++ V WK++ 
Subjt:  SQFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLSKTNEWVSLSHLLSSIKTQAIDDTWSWSIDSSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVY

Query:  PKK
          K
Subjt:  PKK

XP_038882286.1 uncharacterized protein LOC120073517 [Benincasa hispida]3.4e-2754.4Show/hide
Query:  MVPHLFSRLGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGL
        ++ H  SR G IISHPIG   L+L HLQFADDTLLFS  D   L NLF+++ +FE A GLNIN +KSELLGIH+  S  + +   FGC + SW S+YLG 
Subjt:  MVPHLFSRLGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGL

Query:  PLRGSSKGSQFWQPVIERIRHKLHN
        PL  +SK   F Q V+E+I+ KL+N
Subjt:  PLRGSSKGSQFWQPVIERIRHKLHN

TrEMBL top hitse value%identityAlignment
A0A803P465 Uncharacterized protein2.0e-2545.59Show/hide
Query:  GRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGS
        G I    +G  R+ ++HLQFADDT+ F V + ++L  L  +++ F   SGL IN +KS+LLGI +    +  L  + GC+ GSWP  YLG+PL GS +  
Subjt:  GRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGS

Query:  QFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLS
         FW+PV+++   +L  WK +F+SKGGR TLIQS LS
Subjt:  QFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLS

A0A803P8A0 Uncharacterized protein1.3e-2447.29Show/hide
Query:  IGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVI
        IG   + L+HLQFADDTL F V D  +L  L +I++ F   SGL +N  KS+LLGI +++  +       GC+ G WP TYLG+PL GS +   FW+PV+
Subjt:  IGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVI

Query:  ERIRHKLHNWKYSFISKGGRHTLIQSTLS
        ++   ++  WK SF+S+GGR TLIQS LS
Subjt:  ERIRHKLHNWKYSFISKGGRHTLIQSTLS

A0A803PZS1 Uncharacterized protein7.5e-2547.55Show/hide
Query:  LFSRL--GRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPL
        LFS L  GR      G   + ++HLQFADDTL F V D  +L  L EI++ F   S L +N  KS+LLGI +    +   T   GCK G+WP TYLG+PL
Subjt:  LFSRL--GRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPL

Query:  RGSSKGSQFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLS
         GS +   FW+PV+++   +L  WK SF+S+GGR TLIQS LS
Subjt:  RGSSKGSQFWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLS

A0A803QI00 Uncharacterized protein3.7e-2446.51Show/hide
Query:  IGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVI
        +G   + ++HLQFADDTL F V D  +L  L EI++ F   SGL +N  KS+LLGI +    +       GC+ G+WP TYLG+PL GS +   FW+PV+
Subjt:  IGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVI

Query:  ERIRHKLHNWKYSFISKGGRHTLIQSTLS
        ++   +L  WK SF+S+GGR  LIQS LS
Subjt:  ERIRHKLHNWKYSFISKGGRHTLIQSTLS

F4NCL6 Reverse transcriptase domain-containing protein7.5e-2549.59Show/hide
Query:  LTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVIERIRHKL
        LTHLQFADDT+LF+ ++ +AL+N+ + + LF+++SGL INF KSELLGI++    ++       CK GS+P TYLG+P+ GS     FW P+IE+I  KL
Subjt:  LTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQFWQPVIERIRHKL

Query:  HNWKYSFISKGGRHTLIQSTL
          WK + +S GGR TLI+++L
Subjt:  HNWKYSFISKGGRHTLIQSTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCTCATCTTTTTTCAAGATTGGGTAGAATTATTTCTCATCCAATAGGTAACTTTCGCCTCTCATTGACGCACTTGCAATTTGCGGATGATACTCTTCTTTTTTC
CGTCTATGATTCTAAAGCATTGGATAATCTTTTTGAGATTATCAAACTCTTTGAGATGGCTTCTGGTTTGAACATCAATTTTGCTAAGAGTGAGCTTTTGGGGATTCACA
TTGCCAATTCAAAAATTGAATGTTTGACACCAAAATTTGGTTGTAAGCAAGGTTCGTGGCCTTCCACATATTTGGGGCTTCCTTTGAGGGGCAGTTCGAAAGGTTCTCAG
TTTTGGCAACCTGTTATTGAAAGAATCCGACATAAGCTTCATAATTGGAAATACTCTTTTATCTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAAGAC
AAATGAGTGGGTTAGTCTCTCTCATCTGCTTTCTTCCATCAAAACTCAAGCTATTGATGACACTTGGTCTTGGTCTATTGATTCGTCTAATGCATTCACAGTTAAATCGC
TTATGGGAGATATGGTTGGTGATTCTGACCCCACATCAAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCTCATCTTTTTTCAAGATTGGGTAGAATTATTTCTCATCCAATAGGTAACTTTCGCCTCTCATTGACGCACTTGCAATTTGCGGATGATACTCTTCTTTTTTC
CGTCTATGATTCTAAAGCATTGGATAATCTTTTTGAGATTATCAAACTCTTTGAGATGGCTTCTGGTTTGAACATCAATTTTGCTAAGAGTGAGCTTTTGGGGATTCACA
TTGCCAATTCAAAAATTGAATGTTTGACACCAAAATTTGGTTGTAAGCAAGGTTCGTGGCCTTCCACATATTTGGGGCTTCCTTTGAGGGGCAGTTCGAAAGGTTCTCAG
TTTTGGCAACCTGTTATTGAAAGAATCCGACATAAGCTTCATAATTGGAAATACTCTTTTATCTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAAGAC
AAATGAGTGGGTTAGTCTCTCTCATCTGCTTTCTTCCATCAAAACTCAAGCTATTGATGACACTTGGTCTTGGTCTATTGATTCGTCTAATGCATTCACAGTTAAATCGC
TTATGGGAGATATGGTTGGTGATTCTGACCCCACATCAAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGA
Protein sequenceShow/hide protein sequence
MVPHLFSRLGRIISHPIGNFRLSLTHLQFADDTLLFSVYDSKALDNLFEIIKLFEMASGLNINFAKSELLGIHIANSKIECLTPKFGCKQGSWPSTYLGLPLRGSSKGSQ
FWQPVIERIRHKLHNWKYSFISKGGRHTLIQSTLSKTNEWVSLSHLLSSIKTQAIDDTWSWSIDSSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFI