CuGenDBv2

Gene ID	Lag0033558
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Rubredoxin-like domain-containing protein
Genome location	chr3:293330..294519
RNA-Seq Expression	Lag0033558
Synteny	Lag0033558
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]

5.0e-71

82.66

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
        MAS+SA+ L F LPPKPH K+NQEDGG DR+       SNRL LKSSFISPLRKIPSLR Q+S   AAA+PKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK

Query:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        LPDKYFCPVCGAPKRRFRPYE++V+KN NEFDVRKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNS F
Subjt:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]

3.8e-71

83.24

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
        MASVSA+ L F LPPKPH K+NQEDGG DR+       SNRL LKSSFISPLRKIPSLR Q+S   AAA+PKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK

Query:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        LPDKYFCPVCGAPKRRFRPYE++V KN NEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_022927654.1 uncharacterized protein LOC111434474 [Cucurbita moschata]

4.5e-72

87.95

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
        MASVSAT LRFQLPP  HSKI QEDGGADR S+ L LKSSF SPLR IPSLR Q+S  A AAAPK SMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC

Query:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        PVCGAPKRRFRPYE+SVTKNANEFD RKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLN+ F
Subjt:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

4.2e-70

83.82

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
        MAS SA+ L F LPP PHSKINQEDGGADR        SNR  LKSSFISPLR+IPS R Q    A AAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK

Query:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        LPD YFCPVCGAPKRRFRPYE+SVTKN NEFDVRKARKAQIQKDEAIGKVLPIAAAVGI+ALVGLYLYLNSVF
Subjt:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

XP_023531329.1 uncharacterized protein LOC111793604 [Cucurbita pepo subsp. pepo]

1.0e-71

87.35

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
        MASVSAT LRFQLPP  HSKI QEDGGADR S+ L LKSSF SPLR IPSLR Q+S  A AAAPK SMRVASKQAYICRDCGYIYNDRTPF+KLPDKYFC
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC

Query:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        PVCGAPKRRFRPYE+SVTKNANEFD RKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLN+ F
Subjt:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X1

1.8e-71

83.24

Show/hide

Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
        MASVSA+ L F LPPKPH K+NQEDGG DR+       SNRL LKSSFISPLRKIPSLR Q+S   AAA+PKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK

Query:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        LPDKYFCPVCGAPKRRFRPYE++V KN NEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

A0A5A7UPF0 Rubredoxin family protein

1.8e-71

83.24

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
        MASVSA+ L F LPPKPH K+NQEDGG DR+       SNRL LKSSFISPLRKIPSLR Q+S   AAA+PKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK

Query:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        LPDKYFCPVCGAPKRRFRPYE++V KN NEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

A0A6J1EIL7 uncharacterized protein LOC111434474

2.2e-72

87.95

Show/hide

Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
        MASVSAT LRFQLPP  HSKI QEDGGADR S+ L LKSSF SPLR IPSLR Q+S  A AAAPK SMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC

Query:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        PVCGAPKRRFRPYE+SVTKNANEFD RKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLN+ F
Subjt:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

A0A6J1IG97 uncharacterized protein LOC111473110

2.2e-72

87.95

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
        MASVSAT LRFQLPP  HSKI QEDGGADR S+ L LKSSF SPLR IPSLR Q+S  A AAAPK SMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFC

Query:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        PVCGAPKRRFRPYE+SVTKNANEFD RKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLN+ F
Subjt:  PVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

E5GBM0 Electron transporter

1.8e-71

83.24

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Query:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK
        MASVSA+ L F LPPKPH K+NQEDGG DR+       SNRL LKSSFISPLRKIPSLR Q+S   AAA+PKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSATCLRFQLPPKPHSKINQEDGGADRD-------SNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK

Query:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF
        LPDKYFCPVCGAPKRRFRPYE++V KN NEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  LPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

2.2e-05

41.07

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Query:  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE
        V++ + Y CR CGYIY+             TPFE LP+ + CP CGA K+ F+P +
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

9.9e-06

48.84

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Query:  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP
        Q Y+C  CGY Y    +D  PF++LPD + CPVCG  K +F P
Subjt:  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP

P24297 Rubredoxin

1.7e-05

41.18

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Query:  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYEE
        ++C+ CGYIY++            T FE+LPD + CP+CGAPK  F   E+
Subjt:  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYEE

P58992 Rubredoxin-1

4.2e-04

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Query:  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY
        +++C +CGYIY+              PF+KLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY

Q9AL94 Rubredoxin

1.1e-04

43.14

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Query:  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEE
        Y+C  CGYIY           N  T FE +PD + CP+CG  K +F P EE
Subjt:  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEE

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

2.4e-07

33.66

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Query:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVL-PIAAAVGIVALV
        A P+F  ++   Q     +IC DCG+IY     F++ PD Y CP C APK+RF  Y+                   +   +AIG  L PI   VG++A +
Subjt:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKDEAIGKVL-PIAAAVGIVALV

Query:  G
        G
Subjt:  G

AT5G51010.1 Rubredoxin-like superfamily protein

4.4e-41

64.57

Show/hide

Query:  KSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKD
        +SSF+ P   +  L  + S  + ++AP+FSMRV+SKQAYICRDCGYIYNDRTPF+KLPD YFCPVC APKRRFR Y   V+KN N+ DVRKARKA++Q+D
Subjt:  KSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEESVTKNANEFDVRKARKAQIQKD

Query:  EAIGKVLPIAAAVGIVALVGLYLYLNS
        EA+GK LPI  AVG++AL  LY Y+NS
Subjt:  EAIGKVLPIAAAVGIVALVGLYLYLNS

Sequences

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CDS sequence

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ATGGCTTCTGTTTCAGCTACTTGTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCCGATAGGGACTCCAACCGCTTACCTCT
GAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGCTGCAGCTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAAC
AAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCCGTTTGTGGTGCTCCTAAGCGACGATTT
AGGCCTTATGAGGAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGGAAGGCACAGATCCAGAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGC
TGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG

mRNA sequence

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Protein sequence

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MASVSATCLRFQLPPKPHSKINQEDGGADRDSNRLPLKSSFISPLRKIPSLRTQSSAAAAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRF
RPYEESVTKNANEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNSVF

Lag0033558 (gene) of Sponge gourd (AG-4) v1 genome