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Lag0033605 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033605
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationchr3:513360..513705
RNA-Seq ExpressionLag0033605
SyntenyLag0033605
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8036972.1 hypothetical protein BT93_B0024 [Corymbia citriodora subsp. variegata]8.2e-2895.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_008789708.1 protein transport protein Sec61 subunit gamma-like [Phoenix dactylifera]1.8e-2794.2Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDS+RLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_010249036.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Nelumbo nucifera]1.1e-2795.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_020248575.1 protein transport protein Sec61 subunit gamma [Asparagus officinalis]1.4e-2795.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

XP_042954211.1 protein transport protein Sec61 subunit gamma [Carya illinoinensis]8.2e-2895.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

TrEMBL top hitse value%identityAlignment
A0A1U7Z6U9 protein transport protein Sec61 subunit gamma-like5.2e-2895.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A2I4EZZ8 protein transport protein Sec61 subunit gamma1.2e-2794.2Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR+FAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A2P2JAK7 Protein transport protein Sec61 subunit gamma4.0e-2895.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A5P1FH26 Uncharacterized protein8.8e-2895.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDAI+SVVDPLRDFAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

A0A7I8KBY0 Hypothetical protein1.2e-2794.2Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR+FAKDSVRLVKRCHKPDR EFTKVAFRTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-17.7e-2992.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLRDFAKDS+RLVKRCHKPDR EFTKVA RTA GFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-27.7e-2992.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLRDFAKDS+RLVKRCHKPDR EFTKVA RTA GFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma2.6e-2992.75Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG
        MDA+DSVVDPLR+FAKDSVRLVKRCHKPDR EFTKVA RTA GFVVMGFVGFFVKLIFIPINNIIVGSG
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG

Q7Z1B8 Protein transport protein Sec61 subunit gamma3.8e-2069.12Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        MD +   ++P R FAKDS+RLVKRC KPDR EF K+A  TA GF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-35.5e-2786.76Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS +DPLRDFAK SVRLV+RCHKPDR EFTKVA RTA GFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein3.9e-2886.76Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDS +DPLRDFAK SVRLV+RCHKPDR EFTKVA RTA GFVVMGFVGFFVKL+FIPINNIIVGS
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS

AT4G24920.1 secE/sec61-gamma protein transport protein5.5e-3092.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLRDFAKDS+RLVKRCHKPDR EFTKVA RTA GFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein5.5e-3092.65Show/hide
Query:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS
        MDAIDSVVDPLRDFAKDS+RLVKRCHKPDR EFTKVA RTA GFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCATTGATTCAGTCGTCGATCCTCTCAGAGATTTCGCTAAGGATAGCGTTCGTCTCGTCAAGAGATGCCACAAGCCTGATCGCAATGAATTTACTAAGGTGGC
CTTCCGTACGGCAACCGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATCTTCATTCCGATTAACAATATCATCGTCGGATCTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCATTGATTCAGTCGTCGATCCTCTCAGAGATTTCGCTAAGGATAGCGTTCGTCTCGTCAAGAGATGCCACAAGCCTGATCGCAATGAATTTACTAAGGTGGC
CTTCCGTACGGCAACCGGTTTCGTCGTGATGGGATTTGTCGGTTTTTTCGTCAAGTTGATCTTCATTCCGATTAACAATATCATCGTCGGATCTGGATAG
Protein sequenceShow/hide protein sequence
MDAIDSVVDPLRDFAKDSVRLVKRCHKPDRNEFTKVAFRTATGFVVMGFVGFFVKLIFIPINNIIVGSG