; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033607 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033607
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein indeterminate-domain 16
Genome locationchr3:524245..524727
RNA-Seq ExpressionLag0033607
SyntenyLag0033607
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]8.7e-5776.4Show/hide
Query:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA
        MEDEDQKELQLLPT  S  +SSS        SSLRFRS+P FEA      G GGSVDLQLSISLRP          +FKYEEVMKPEAASCVEA+KWQAA
Subjt:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA

Query:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        EQIRLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

KAE8652381.1 hypothetical protein Csa_014379 [Cucumis sativus]1.7e-5575.86Show/hide
Query:  MEDEDQKELQLLPTAQSSLASS----------SSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-----------MFKYEEVMKPEAASCVEAVKW
        MEDEDQKELQLLPT  S  +SS          SSSLRFRS+PLFEA      G GGSVDLQLSISLRP           +FKYEEVMKPEAASCV+A+KW
Subjt:  MEDEDQKELQLLPTAQSSLASS----------SSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-----------MFKYEEVMKPEAASCVEAVKW

Query:  QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSC
        QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC
Subjt:  QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSC

XP_004138047.1 protein indeterminate-domain 16 [Cucumis sativus]1.6e-5875.69Show/hide
Query:  MEDEDQKELQLLPTAQSSLASS----------SSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-----------MFKYEEVMKPEAASCVEAVKW
        MEDEDQKELQLLPT  S  +SS          SSSLRFRS+PLFEA      G GGSVDLQLSISLRP           +FKYEEVMKPEAASCV+A+KW
Subjt:  MEDEDQKELQLLPTAQSSLASS----------SSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-----------MFKYEEVMKPEAASCVEAVKW

Query:  QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]3.0e-5776.97Show/hide
Query:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA
        MEDEDQKELQLLPT  S  +SSS        SSLRFRS+P FEA      G GGSVDLQLSISLRP          +FKYEEVMKPEAASCVEA+KWQAA
Subjt:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA

Query:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]1.9e-5677.71Show/hide
Query:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-------MFKYEEVMKPEAASCVEAVKWQAAEQI
        MEDEDQKELQLLPT  S  +SSS        SSLRFRS+  FEAAG       GSVDLQLSISLRP       +FKYEEVMKPEAASCVEA+KWQAAEQI
Subjt:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-------MFKYEEVMKPEAASCVEAVKWQAAEQI

Query:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LRS8 Uncharacterized protein7.7e-5975.69Show/hide
Query:  MEDEDQKELQLLPTAQSSLASS----------SSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-----------MFKYEEVMKPEAASCVEAVKW
        MEDEDQKELQLLPT  S  +SS          SSSLRFRS+PLFEA      G GGSVDLQLSISLRP           +FKYEEVMKPEAASCV+A+KW
Subjt:  MEDEDQKELQLLPTAQSSLASS----------SSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP-----------MFKYEEVMKPEAASCVEAVKW

Query:  QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  QAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

A0A1S3CN02 protein indeterminate-domain 161.5e-5776.97Show/hide
Query:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA
        MEDEDQKELQLLPT  S  +SSS        SSLRFRS+P FEA      G GGSVDLQLSISLRP          +FKYEEVMKPEAASCVEA+KWQAA
Subjt:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA

Query:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

A0A5A7UWD1 Protein indeterminate-domain 164.2e-5776.4Show/hide
Query:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA
        MEDEDQKELQLLPT  S  +SSS        SSLRFRS+P FEA      G GGSVDLQLSISLRP          +FKYEEVMKPEAASCVEA+KWQAA
Subjt:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA

Query:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        EQIRLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

A0A5D3BFD1 Protein indeterminate-domain 161.5e-5776.97Show/hide
Query:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA
        MEDEDQKELQLLPT  S  +SSS        SSLRFRS+P FEA      G GGSVDLQLSISLRP          +FKYEEVMKPEAASCVEA+KWQAA
Subjt:  MEDEDQKELQLLPTAQSSLASSS--------SSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRP----------MFKYEEVMKPEAASCVEAVKWQAA

Query:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  EQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

A0A6J1C0T1 protein indeterminate-domain 164.4e-5474.85Show/hide
Query:  MEDEDQKELQLLPTAQSSLASS-------SSSLRFR----SEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAA
        MEDEDQKELQLLPT  S  +SS        SS RFR    S+PLFE  GAGAG  G S+DLQLSIS+RP+    E+MKPEAA   EA+KWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTAQSSLASS-------SSSLRFR----SEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAR+E+EKAER+K RATRQ+DSTCMEITCQSC  RFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 51.2e-0829.61Show/hide
Query:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI
        ELQLLP + +   +  +  +   EP                   L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+ 
Subjt:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI

Query:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR
        E+A+ EFA A+++ ++A+ ELE+A+ +K ++ +++ ST M++TCQ+C  +F+
Subjt:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR

Q9C9X7 Protein indeterminate-domain 141.9e-0642.86Show/hide
Query:  ERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR
        E  R  TKR+IE+A+ EFA A+++ + AR EL KA   +  A+R++ +T M+ITC +C   F+
Subjt:  ERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR

Q9FRH4 Protein indeterminate-domain 163.3e-0633.93Show/hide
Query:  SVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCM
        S++LQLSI           M   +A      K + +     A  E   AE  R+  KR+IE+A+ +F +A+++ E A+ ELEKA  ++  A +++++T M
Subjt:  SVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCM

Query:  EITCQSCSHRFR
        EITC SC   F+
Subjt:  EITCQSCSHRFR

Arabidopsis top hitse value%identityAlignment
AT1G68130.1 indeterminate(ID)-domain 141.4e-0742.86Show/hide
Query:  ERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR
        E  R  TKR+IE+A+ EFA A+++ + AR EL KA   +  A+R++ +T M+ITC +C   F+
Subjt:  ERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR

AT2G01940.1 C2H2-like zinc finger protein8.6e-1029.61Show/hide
Query:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI
        ELQLLP + +   +  +  +   EP                   L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+ 
Subjt:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI

Query:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR
        E+A+ EFA A+++ ++A+ ELE+A+ +K ++ +++ ST M++TCQ+C  +F+
Subjt:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR

AT2G01940.2 C2H2-like zinc finger protein8.6e-1029.61Show/hide
Query:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI
        ELQLLP + +   +  +  +   EP                   L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+ 
Subjt:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI

Query:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR
        E+A+ EFA A+++ ++A+ ELE+A+ +K ++ +++ ST M++TCQ+C  +F+
Subjt:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR

AT2G01940.3 C2H2-like zinc finger protein8.6e-1029.61Show/hide
Query:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI
        ELQLLP + +   +  +  +   EP                   L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+ 
Subjt:  ELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQI-RLAAMEKAYAERVRELTKREI

Query:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR
        E+A+ EFA A+++ ++A+ ELE+A+ +K ++ +++ ST M++TCQ+C  +F+
Subjt:  ELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)1.5e-3047.93Show/hide
Query:  EDEDQKELQLLPTAQSS-----------LASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAAM
        + +  KELQLLP+  S+           + +   +   RS  +              +DL+LSISL  +   EE+  P     VEA+KWQAAEQIRLAA+
Subjt:  EDEDQKELQLLPTAQSS-----------LASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRP
        EKAYAERVRELT+RE+E+AQ+EFARAR MW++AR+E+E+AER+K R+  ++D+ C+EITC SC  RFRP
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGATCAGAAAGAACTGCAGCTCCTTCCAACGGCTCAGAGCTCCCTAGCGTCGTCGTCGTCGTCGTTACGGTTCCGGTCGGAACCATTATTCGAGGCGGC
GGGTGCAGGAGCAGGAGGAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCG
TGGAGGCGGTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTAGGGAGCTGACGAAGAGGGAAATAGAATTGGCGCAA
ACGGAATTCGCAAGGGCTCGACAGATGTGGGAAAGGGCAAGACAGGAACTCGAAAAGGCCGAGCGAATCAAACACCGAGCCACTCGCCAGTTGGACTCTACGTGCATGGA
GATCACTTGCCAATCTTGCAGCCACAGGTTCCGCCCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGATCAGAAAGAACTGCAGCTCCTTCCAACGGCTCAGAGCTCCCTAGCGTCGTCGTCGTCGTCGTTACGGTTCCGGTCGGAACCATTATTCGAGGCGGC
GGGTGCAGGAGCAGGAGGAGGAGGTGGGTCGGTGGACCTGCAGCTATCGATAAGCCTGAGGCCAATGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCG
TGGAGGCGGTGAAGTGGCAGGCGGCGGAGCAAATAAGGCTGGCGGCGATGGAAAAGGCGTACGCGGAGAGAGTTAGGGAGCTGACGAAGAGGGAAATAGAATTGGCGCAA
ACGGAATTCGCAAGGGCTCGACAGATGTGGGAAAGGGCAAGACAGGAACTCGAAAAGGCCGAGCGAATCAAACACCGAGCCACTCGCCAGTTGGACTCTACGTGCATGGA
GATCACTTGCCAATCTTGCAGCCACAGGTTCCGCCCTTCTTGA
Protein sequenceShow/hide protein sequence
MEDEDQKELQLLPTAQSSLASSSSSLRFRSEPLFEAAGAGAGGGGGSVDLQLSISLRPMFKYEEVMKPEAASCVEAVKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ
TEFARARQMWERARQELEKAERIKHRATRQLDSTCMEITCQSCSHRFRPS