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Lag0033637 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033637
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr3:795030..796647
RNA-Seq ExpressionLag0033637
SyntenyLag0033637
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.4e-0940.74Show/hide
Query:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS
        +K+DLLSI  N+  +  Q+ + +W L GD N S+ HR+   N+RK+ I  I   +G+SL + +DI + F++ FQN+YTK++
Subjt:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.0e-0941.98Show/hide
Query:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS
        +K+DLLSI  N+  +  Q+ + +W L GD N S+ HR+   N+RK+ I  I   +G+SL + +DI + F++ FQN+YTK+S
Subjt:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.0e-0941.98Show/hide
Query:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS
        +K+DLLSI  N+  +  Q+ + +W L GD N S+ HR+   N+RK+ I  I   +G+SL + +DI + F++ FQN+YTK+S
Subjt:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]2.5e-1253.09Show/hide
Query:  DEGRKGISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAF
        D+ R  I Q K DLLS+ A EE   RQ+CK KW  EGD NT F HR +AN RR+S I EI+S  G  L   +DIE+EF+ F
Subjt:  DEGRKGISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAF

XP_027098875.1 uncharacterized protein LOC113718155 [Coffea arabica]7.5e-0938.37Show/hide
Query:  ISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQSNS
        +S+ +A L+   ANE+   RQ+ +++W  +GD N+ F H  +A  R KS I+ I S+ G  L ++EDI +E ++FFQ L++ QS +
Subjt:  ISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQSNS

TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein9.5e-1041.98Show/hide
Query:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS
        +K+DLLSI  N+  +  Q+ + +W L GD N S+ HR+   N+RK+ I  I   +G+SL + +DI + F++ FQN+YTK+S
Subjt:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein2.1e-0940.74Show/hide
Query:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS
        +K+DLLSI  N+  +  Q+ + +W L GD N S+ HR+   N+RK+ I  I   +G+SL + +DI + F++ FQN+YTK++
Subjt:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein9.5e-1041.98Show/hide
Query:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS
        +K+DLLSI  N+  +  Q+ + +W L GD N S+ HR+   N+RK+ I  I   +G+SL + +DI + F++ FQN+YTK+S
Subjt:  IKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQS

A0A6J1E2G6 uncharacterized protein LOC1110254051.2e-1253.09Show/hide
Query:  DEGRKGISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAF
        D+ R  I Q K DLLS+ A EE   RQ+CK KW  EGD NT F HR +AN RR+S I EI+S  G  L   +DIE+EF+ F
Subjt:  DEGRKGISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAF

A0A6P6V8B8 uncharacterized protein LOC1137181553.6e-0938.37Show/hide
Query:  ISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQSNS
        +S+ +A L+   ANE+   RQ+ +++W  +GD N+ F H  +A  R KS I+ I S+ G  L ++EDI +E ++FFQ L++ QS +
Subjt:  ISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLYTKQSNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTATCCGTTAGAGCCCCAATTACCAAGTATAATGAGAGAAAGGGTAGGAAAGGCTTTTTTTTTATAGATGAGGGTAGGAAAGGCATTTCGCAGATCAAGGCTGA
TCTTTTATCCATTGCGGCTAATGAAGAGATTGTGTGTCGCCAACAGTGCAAATTGAAATGGTTTTTGGAAGGCGATATCAATACTTCTTTTGTTCACAGACTCATGGCTA
ACAACAGAAGGAAAAGCTCCATTAATGAAATTATCTCAGCCTCGGGAAGCAGTCTCATAACAGATGAGGATATTGAAAAGGAATTCTTAGCCTTCTTCCAGAATCTCTAT
ACGAAACAGAGCAATAGTCCCCCCTGCCGCATATGGATGACTGGAGCCCCATATCCCCTGCGCAACAAGCTGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTATCCGTTAGAGCCCCAATTACCAAGTATAATGAGAGAAAGGGTAGGAAAGGCTTTTTTTTTATAGATGAGGGTAGGAAAGGCATTTCGCAGATCAAGGCTGA
TCTTTTATCCATTGCGGCTAATGAAGAGATTGTGTGTCGCCAACAGTGCAAATTGAAATGGTTTTTGGAAGGCGATATCAATACTTCTTTTGTTCACAGACTCATGGCTA
ACAACAGAAGGAAAAGCTCCATTAATGAAATTATCTCAGCCTCGGGAAGCAGTCTCATAACAGATGAGGATATTGAAAAGGAATTCTTAGCCTTCTTCCAGAATCTCTAT
ACGAAACAGAGCAATAGTCCCCCCTGCCGCATATGGATGACTGGAGCCCCATATCCCCTGCGCAACAAGCTGATTTAG
Protein sequenceShow/hide protein sequence
MGLSVRAPITKYNERKGRKGFFFIDEGRKGISQIKADLLSIAANEEIVCRQQCKLKWFLEGDINTSFVHRLMANNRRKSSINEIISASGSSLITDEDIEKEFLAFFQNLY
TKQSNSPPCRIWMTGAPYPLRNKLI