CuGenDBv2

Gene ID	Lag0033652
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Centromere protein X
Genome location	chr3:884279..885368
RNA-Seq Expression	Lag0033652
Synteny	Lag0033652
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0051382 - kinetochore assembly (biological process) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR018552 - Centromere protein X

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589406.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-43

93.2

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSR+S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+SKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022135388.1 protein MHF2 homolog [Momordica charantia]

3.0e-42

93.2

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEESAFD DLIHAIFKLEWSR+S ERE+NESSDAMDCEV+AGTSKKSRPMSANANALKLSSKLLQ+FISEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]

3.5e-43

93.2

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSR+S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+SKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]

3.5e-43

93.2

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEW+R+S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]

1.6e-43

94.17

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSR+S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LU58 Uncharacterized protein

3.7e-38

85.85

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESS-DAMDCEVD--AGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILP
        MEE+ F PDLIHAIFKLEWSR+S EREKNE++ DAMDCEVD  AGTSKKSRPMSANANALKLSSKL+Q+FISEA+QRAATIAEAEGISRIE THLER+LP
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESS-DAMDCEVD--AGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILP

Query:  QLLLDF
        QLLLDF
Subjt:  QLLLDF

A0A1S3CLK5 centromere protein X isoform X2

7.5e-39

85.71

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVD--AGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQ
        MEE+ F PDLIHAIFKLEWSR+S EREKNE+ DAMDCEVD  AGTSKKSRPMSANANALKLSSKL+Q+FISEA+QRAATIAEAEGI RIE THLER+LPQ
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVD--AGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQ

Query:  LLLDF
        LLLDF
Subjt:  LLLDF

A0A6J1C4N9 protein MHF2 homolog

1.5e-42

93.2

Show/hide

Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEESAFD DLIHAIFKLEWSR+S ERE+NESSDAMDCEV+AGTSKKSRPMSANANALKLSSKLLQ+FISEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

A0A6J1E4X1 protein MHF2 homolog

1.7e-43

93.2

Show/hide

Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSR+S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+SKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

A0A6J1JD93 protein MHF2 homolog

1.7e-43

93.2

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Query:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEW+R+S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQ+F+SEA+QRAATIAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

SwissProt top hits

e value

%identity

Alignment

P0DJH7 Centromere protein X

2.8e-06

49.02

Show/hide

Query:  NANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E++LPQLLLDF
Subjt:  NANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Q2NKU0 Centromere protein X

3.0e-05

41.38

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Query:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        K +    + +AL+L ++LL++F+ EA  R+   A+AEG++ ++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Q8L7N3 Protein MHF2 homolog

8.8e-29

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Query:  SAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        + FD DLIHAIFK  W+R+  ERE++++ DA + EV  GT+KK+R  SANANALKLS +LL+ F+SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Arabidopsis top hits

e value

%identity

Alignment

AT1G78790.1 unknown protein

6.3e-30

Show/hide

Query:  SAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        + FD DLIHAIFK  W+R+  ERE++++ DA + EV  GT+KK+R  SANANALKLS +LL+ F+SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

AT1G78790.2 unknown protein

2.6e-20

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Query:  SAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF
        + FD DLIHAIFK  W+R+  ERE++++ DA + EV  GT+KK+R                    SEA+QRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Sequences

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CDS sequence

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ATGGAAGAGAGCGCGTTCGATCCTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAAATCACATGAACGCGAGAAAAACGAGAGTTCTGATGCTATGGATTG
CGAGGTTGACGCTGGAACATCCAAGAAGAGCAGGCCAATGTCTGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAAATGTTTATCTCAGAGGCCATACAGC
GTGCTGCAACCATTGCTGAGGCTGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTTCCACAGTTGCTACTGGATTTTTGA

mRNA sequence

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Protein sequence

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MEESAFDPDLIHAIFKLEWSRKSHEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLSSKLLQMFISEAIQRAATIAEAEGISRIEATHLERILPQLLLDF

Lag0033652 (gene) of Sponge gourd (AG-4) v1 genome