; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033664 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033664
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:952163..955006
RNA-Seq ExpressionLag0033664
SyntenyLag0033664
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8597368.1 hypothetical protein GDO81_002266 [Engystomops pustulosus]1.6e-1036.91Show/hide
Query:  LGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCG
        + R  +F GP   R GH        G S+ R R+FPGP   R  H        G S+ R R+FPGP   R GH        G S+ R R+F GP   R G
Subjt:  LGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCG

Query:  HPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPG
        H       LG S+ R  +FPGP   R GH        G S+ R  +FPG
Subjt:  HPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPG

OWB80996.1 hypothetical protein B5S32_g5335 [[Candida] boidinii]4.0e-0930.58Show/hide
Query:  SLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRC
        SLG+P N  G      G P  +      SLG+P N  G      G P  +      SLG+P N  G      G P  +      SLG+P N  G      
Subjt:  SLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRC

Query:  GHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNSQGLSSSVVVIQRGAYTLLGKSLGR
        G P  +  +   SLG+P N  G      G P         SLG+P N  G      G P  +  +   SLG+P NS G+ ++     +G  T    SLG+
Subjt:  GHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNSQGLSSSVVVIQRGAYTLLGKSLGR

Query:  PRNFPG
        P N  G
Subjt:  PRNFPG

XP_015472393.2 basic proline-rich protein-like, partial [Parus major]2.4e-1437.9Show/hide
Query:  TNTFPAWLEKFEGSLGRLWDFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLG
        T   P  L K  G  GR     GPL    G P  A   LG   G P   PGP     G P  A  L G++   PR  PGPL K  G P       G   G
Subjt:  TNTFPAWLEKFEGSLGRLWDFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLG

Query:  RPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHP
         P   PGPL K  G P      LGK+LG PR  PGPL K  G P     LLG   G P   PGPL    G        LG   G     PGPL    G P
Subjt:  RPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHP

Query:  RGAYTLLGKSLGRPRNSQG
          A   LG + G P  + G
Subjt:  RGAYTLLGKSLGRPRNSQG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTGGTCGGCCTCGGCCTCGGCAGCGAGACCCCCGTACTAGGTCATTCGGAGTGCTTCATTTCAGATCCGGGGCTTTTGCAGGTGACTGGTCGGCCTCGGCCTTG
GCATGAGGCTGACCAACTCCTCTGTGCTGTTTTCTTACCCGCTCCACGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGCTTTGCTTGCTACTTTTC
TCTGTTGTATCCATCCCGAGGGGGCGGAACTCGACCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGACGACCAGCTCCTCTGTGTTGTTCGCTTGCTTGTTT
TCCATTCCAAGGGTGCGTGCACCCATAAGAAAATATAATGTCATACCTGGTCTTTTGAGGACAAAGTTCATTCTTGAAGCTGAGGCAGCCGGCCCTGACCTTGGCGTGAG
GTTGAGCCTCGCTTCTCCATCACTTTTTTGTTTTCCTCATAGTTGGACTCATGTGCAGATACCTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCCTTGTC
TAGTGGTCGGCCTTAGCCTTGGCATGAGGACGAACACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCAGGGCCTCTCTTCAAG
CGTCGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTA
CACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGA
GGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTC
TTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGG
TGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCT
TGGGGAGGCCTAGGAATTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCAGAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGC
CTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACTGGTCGGCCTCGGCCTCGGCAGCGAGACCCCCGTACTAGGTCATTCGGAGTGCTTCATTTCAGATCCGGGGCTTTTGCAGGTGACTGGTCGGCCTCGGCCTTG
GCATGAGGCTGACCAACTCCTCTGTGCTGTTTTCTTACCCGCTCCACGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGCTTTGCTTGCTACTTTTC
TCTGTTGTATCCATCCCGAGGGGGCGGAACTCGACCTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGACGACCAGCTCCTCTGTGTTGTTCGCTTGCTTGTTT
TCCATTCCAAGGGTGCGTGCACCCATAAGAAAATATAATGTCATACCTGGTCTTTTGAGGACAAAGTTCATTCTTGAAGCTGAGGCAGCCGGCCCTGACCTTGGCGTGAG
GTTGAGCCTCGCTTCTCCATCACTTTTTTGTTTTCCTCATAGTTGGACTCATGTGCAGATACCTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCCTTGTC
TAGTGGTCGGCCTTAGCCTTGGCATGAGGACGAACACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCAGGGCCTCTCTTCAAG
CGTCGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTA
CACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGA
GGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTC
TTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGG
TGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCT
TGGGGAGGCCTAGGAATTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCAGAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGC
CTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAG
Protein sequenceShow/hide protein sequence
MVLVGLGLGSETPVLGHSECFISDPGLLQVTGRPRPWHEADQLLCAVFLPAPRMLGLGLGMRLSISSALLATFLCCIHPEGAELDLGLWMVGLGLGMRTTSSSVLFACLF
SIPRVRAPIRKYNVIPGLLRTKFILEAEAAGPDLGVRLSLASPSLFCFPHSWTHVQIPGLRSDYRTQSSPIPCLVVGLSLGMRTNTFPAWLEKFEGSLGRLWDFPGPLFK
RRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPL
FKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNSQGLSSSVVVIQRGAYTLLGKSLGRPRNFPG
LSSSVVVIPGVRTLFWGKAWGGLGISQASLQAA