CuGenDBv2

Gene ID	Lag0033729
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	cytochrome c oxidase assembly factor 6
Genome location	chr3:1422105..1422649
RNA-Seq Expression	Lag0033729
Synteny	Lag0033729
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

2.5e-53

91.23

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD+S G DEVH+DVL+ESRQ+CYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

XP_011655945.1 uncharacterized protein LOC101212489 isoform X1 [Cucumis sativus]

6.0e-52

88.6

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA EAD+S G DEVH+DVL+ESRQ+CYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

XP_022134674.1 uncharacterized protein LOC111006886 [Momordica charantia]

2.6e-55

96.49

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEADAS GLDEVHSDVLA SRQ+CYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]

3.5e-52

89.47

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA+E D S G +EVH+DVLAE RQ+CYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL+LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]

1.2e-55

96.49

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEADAS GLDEVHSDVLAESRQ+CYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA FVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTX1 Uncharacterized protein

2.9e-52

88.6

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA EAD+S G DEVH+DVL+ESRQ+CYKARDAFYAC+EKESDKKPTEIASVGLIYPAECKALRA++ KLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

1.2e-53

91.23

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD+S G DEVH+DVL+ESRQ+CYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

1.2e-53

91.23

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEAD+S G DEVH+DVL+ESRQ+CYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PLILPQPYTFKPT+
Subjt:  PLILPQPYTFKPTS

A0A6J1BZF0 uncharacterized protein LOC111006886

1.3e-55

96.49

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAVEADAS GLDEVHSDVLA SRQ+CYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

A0A6J1I7I2 cytochrome c oxidase assembly factor 6

1.7e-52

89.47

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA+E D S G +EVH+DVLAE RQ+CYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPTS
        PL+LPQPYTFKPTS
Subjt:  PLILPQPYTFKPTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

7.9e-42

66.37

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA++  AS   ++VH DVL ++R +CYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

7.9e-42

66.37

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Query:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA++  AS   ++VH DVL ++R +CYKARDAFYAC+EKES KKPTEIA+VGL+YP EC   R +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

Sequences

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CDS sequence

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ATGGCTGTCGAAGCCGACGCGTCAAGAGGCTTAGATGAAGTTCACAGCGACGTTCTGGCGGAATCCAGACAATCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGT
GGAGAAGGAATCGGACAAAAAGCCCACTGAAATTGCTTCTGTTGGCCTTATTTACCCCGCTGAGTGTAAAGCTTTGAGGGCCGAGTTTGTCAAACTTTGCAGGGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAATAGTAGGGTTCAAAGACTCTTAGATGACAAAGATTCGAGGAGAGGTCCCTTGATACTTCCGCAGCCTTACACTTTT
AAGCCCACTAGTTGA

mRNA sequence

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Protein sequence

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MAVEADASRGLDEVHSDVLAESRQSCYKARDAFYACVEKESDKKPTEIASVGLIYPAECKALRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRGPLILPQPYTF
KPTS

Lag0033729 (gene) of Sponge gourd (AG-4) v1 genome