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Lag0033764 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033764
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr3:1671045..1675775
RNA-Seq ExpressionLag0033764
SyntenyLag0033764
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]7.7e-1140.57Show/hide
Query:  RDVTWFMSNIGDGMASDIFVVADHCEADSHAENAMHLQDGNHVND----KVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAF
        +DV+W M  +     +D+ ++ D   A           +     D       CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+P+ SYA++ AF
Subjt:  RDVTWFMSNIGDGMASDIFVVADHCEADSHAENAMHLQDGNHVND----KVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAF

Query:  FAARSR
          A  R
Subjt:  FAARSR

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]5.3e-1265Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        +NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++ AF  A  R
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]6.9e-1266.1Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++ AF  A  R
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]2.6e-1163.33Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        +NDK  CRP DVINYM+  + VNISYDKAWRG E+AL +IRG+PE SYA++ AF  A  R
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

XP_031745043.1 uncharacterized protein LOC101219435 [Cucumis sativus]7.7e-1154.93Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSRKTQLSVAAASL
        +NDK  C P DVINYM+  + VN+SYDKAWRG E+AL++IRG+PE SYA++ AF  A  R  Q +  A  L
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSRKTQLSVAAASL

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958993.7e-1164.41Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        NDKV CRP DVINYM+  + VNISYDKAW G E+AL +IRG+PE SYA++ AF  A  R
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

A0A1S4E392 uncharacterized protein LOC1079918241.3e-1163.33Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        +NDK  CRP DVINYM+  + VNISYDKAWRG E+AL +IRG+PE SYA++ AF  A  R
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

A0A5A7TC03 ZnF_PMZ domain-containing protein3.7e-1140.57Show/hide
Query:  RDVTWFMSNIGDGMASDIFVVADHCEADSHAENAMHLQDGNHVND----KVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAF
        +DV+W M  +     +D+ ++ D   A           +     D       CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+P+ SYA++ AF
Subjt:  RDVTWFMSNIGDGMASDIFVVADHCEADSHAENAMHLQDGNHVND----KVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAF

Query:  FAARSR
          A  R
Subjt:  FAARSR

A0A5A7V1Z6 CCHC-type domain-containing protein2.6e-1265Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        +NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++ AF  A  R
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

A0A5D3E198 MuDRA-like transposase3.4e-1266.1Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR
        NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++ AF  A  R
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTGCTGCATCTTCGATTTACAGAGGCTGCACACTGTATGCTCAATATACAGCAGGTATTTTCGGGGGCTTCAGATTTGTGCTCGTTTTGGTTCACATCATACC
AGATGCACTCCACGCCGCCAGTTGTGTGCCAGTACTGGGGGATGCACAATACAATAGTTCAATGAATGCATCCGGAGCAAGGGATGTTACTTGGTTCATGTCCAACATTG
GCGATGGGATGGCTAGCGACATATTCGTTGTGGCTGACCACTGTGAGGCAGATTCACATGCTGAGAATGCAATGCATTTACAAGATGGAAATCACGTAAACGACAAGGTC
CAGTGTCGCCCCCGTGATGTTATTAACTATATGAGGAGGAAAAACGGTGTCAACATCAGTTATGACAAGGCATGGAGGGGTTGGGAACTTGCACTTACTGCCATCAGAGG
GTCACCCGAAGCGTCGTATGCACTAATCCCTGCTTTCTTCGCTGCCCGATCGAGAAAAACCCAGCTCAGTGTCGCCGCCGCGTCTCTCCCGTTCACTGCTGCCGCAGCCG
TCGTCTTTCTTCCGCTCGTGCCGCCGCCACCGTCGTATTTCTTCCGTTGGTGCCGCCGTAGCCTTCCTCTATTTTCTGCTTCCTTGCTGTTACTGCCCGCCTTTTCCTTC
TGTTCCCCTCCTCTCACTCCACTTTATTCAATGGAGGTCTCCCACCTCCTAACTCCTCTTCTTCAGGAATCAGGGCTCATTCCAAAAGGACCATCTCCGTGTGTTTTGAA
GGATGCTCCCGTTGTGTGTGCATCCGACTGTAAAGGGAACTGGGGAGTTTCTCTCTTTCATCTGCATTGTATGGCTTTGCAGGCAAGTGAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGTGCTGCATCTTCGATTTACAGAGGCTGCACACTGTATGCTCAATATACAGCAGGTATTTTCGGGGGCTTCAGATTTGTGCTCGTTTTGGTTCACATCATACC
AGATGCACTCCACGCCGCCAGTTGTGTGCCAGTACTGGGGGATGCACAATACAATAGTTCAATGAATGCATCCGGAGCAAGGGATGTTACTTGGTTCATGTCCAACATTG
GCGATGGGATGGCTAGCGACATATTCGTTGTGGCTGACCACTGTGAGGCAGATTCACATGCTGAGAATGCAATGCATTTACAAGATGGAAATCACGTAAACGACAAGGTC
CAGTGTCGCCCCCGTGATGTTATTAACTATATGAGGAGGAAAAACGGTGTCAACATCAGTTATGACAAGGCATGGAGGGGTTGGGAACTTGCACTTACTGCCATCAGAGG
GTCACCCGAAGCGTCGTATGCACTAATCCCTGCTTTCTTCGCTGCCCGATCGAGAAAAACCCAGCTCAGTGTCGCCGCCGCGTCTCTCCCGTTCACTGCTGCCGCAGCCG
TCGTCTTTCTTCCGCTCGTGCCGCCGCCACCGTCGTATTTCTTCCGTTGGTGCCGCCGTAGCCTTCCTCTATTTTCTGCTTCCTTGCTGTTACTGCCCGCCTTTTCCTTC
TGTTCCCCTCCTCTCACTCCACTTTATTCAATGGAGGTCTCCCACCTCCTAACTCCTCTTCTTCAGGAATCAGGGCTCATTCCAAAAGGACCATCTCCGTGTGTTTTGAA
GGATGCTCCCGTTGTGTGTGCATCCGACTGTAAAGGGAACTGGGGAGTTTCTCTCTTTCATCTGCATTGTATGGCTTTGCAGGCAAGTGAAACATAG
Protein sequenceShow/hide protein sequence
MAGAASSIYRGCTLYAQYTAGIFGGFRFVLVLVHIIPDALHAASCVPVLGDAQYNSSMNASGARDVTWFMSNIGDGMASDIFVVADHCEADSHAENAMHLQDGNHVNDKV
QCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALIPAFFAARSRKTQLSVAAASLPFTAAAAVVFLPLVPPPPSYFFRWCRRSLPLFSASLLLLPAFSF
CSPPLTPLYSMEVSHLLTPLLQESGLIPKGPSPCVLKDAPVVCASDCKGNWGVSLFHLHCMALQASET