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Lag0033780 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033780
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationchr3:1798601..1799062
RNA-Seq ExpressionLag0033780
SyntenyLag0033780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146660.2 glycine-rich cell wall structural protein 2 [Cucumis sativus]9.3e-4089.03Show/hide
Query:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA
        MASIKSLA VVC LLSFSAI+SEGRVARKDLGIDLGG+GVGLG GIGLG+GGSGSGSGSGSGSGSGSGS SSSSS SS  SSSSGSGAGSEAGSYAGSYA
Subjt:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA

Query:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN
        GSRAGSGS  NRNGGSGYGSGYG GSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN

XP_008443813.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]1.4e-4088.96Show/hide
Query:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA
        MASIKSLA VVC LLSFS  +SEGRVARKDLGIDLGGLGVGLGAGIGLG+GGSGSGSGSGSGSGSGSGS SSSSS SS  SSSSGSGAGSEAGSYAGSYA
Subjt:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA

Query:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        GSRAGSGS  NRNGGSGYGSGYG GSGRG  NG GEGYGEGHGYGEG GYGGGN
Subjt:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_022921883.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]1.2e-3987.58Show/hide
Query:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAG
        MASI SL VVCFLLSFS I+S+ RVARKDLG+DLGGLGVG+G GIGLGLG  GSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG+G  AGS AGSYAG
Subjt:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAG

Query:  SRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SRAGSGS  NRNGGSG GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_023515817.1 cell wall protein IFF6-like isoform X1 [Cucurbita pepo subsp. pepo]1.9e-4081.66Show/hide
Query:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSY------
        MASI SL VVCFLLSFSAIVS+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGSGSGS SSSSSSS S SS SGSGAGSEAGSY      
Subjt:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSY------

Query:  ----------AGSYAGSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
                  AGSYAGSRAGS S RNRNGGSG GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  ----------AGSYAGSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

XP_023515819.1 putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo]1.4e-4088.89Show/hide
Query:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAG
        MASI SL VVCFLLSFSAIVS+ RVARKDLG+DLGGLGVG+G GIGLGLG  GSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG+G  AGS AGSYAG
Subjt:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAG

Query:  SRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SRAGS S RNRNGGSG GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein4.5e-4089.03Show/hide
Query:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA
        MASIKSLA VVC LLSFSAI+SEGRVARKDLGIDLGG+GVGLG GIGLG+GGSGSGSGSGSGSGSGSGS SSSSS SS  SSSSGSGAGSEAGSYAGSYA
Subjt:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA

Query:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN
        GSRAGSGS  NRNGGSGYGSGYG GSGRG G N  GEGYGEGHGYGEGRGYGGGN
Subjt:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN

A0A1S3B9N0 glycine-rich cell wall structural protein 2-like6.9e-4188.96Show/hide
Query:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA
        MASIKSLA VVC LLSFS  +SEGRVARKDLGIDLGGLGVGLGAGIGLG+GGSGSGSGSGSGSGSGSGS SSSSS SS  SSSSGSGAGSEAGSYAGSYA
Subjt:  MASIKSLA-VVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA

Query:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        GSRAGSGS  NRNGGSGYGSGYG GSGRG  NG GEGYGEGHGYGEG GYGGGN
Subjt:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1C497 putative glycine-rich cell wall structural protein 12.2e-3180.52Show/hide
Query:  MASIKSLAVVCFLLSFS-AIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA
        MA+I+  AVV F+L  S AIVSE RVARKDLGIDLGG+GVGLGAGIGL   G GSGSGSG+G+GSGSGSGSSSSSSS S SSSSGSGAGSEAGSYAGSYA
Subjt:  MASIKSLAVVCFLLSFS-AIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYA

Query:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        GSRAGSGS  NR  GSG GSGYG GSGRGS    GEGYGEGHGYGEG GYGGGN
Subjt:  GSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E2L1 cell wall protein IFF6-like isoform X17.7e-4080.47Show/hide
Query:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSY------
        MASI SL VVCFLLSFS I+S+ RVARKDLG+DLGGLGVG+G GIGLGLGGSGSGSGSGSGSGSGSGS SSSSSSS S SS SGSGAGSEAGSY      
Subjt:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSY------

Query:  ----------AGSYAGSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
                  AGSYAGSRAGSGS  NRNGGSG GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  ----------AGSYAGSRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X35.9e-4087.58Show/hide
Query:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAG
        MASI SL VVCFLLSFS I+S+ RVARKDLG+DLGGLGVG+G GIGLGLG  GSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG+G  AGS AGSYAG
Subjt:  MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAG

Query:  SRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
        SRAGSGS  NRNGGSG GSGYG GSGRGSGNGGGEGYGEGHGYGEGRGYGGGN
Subjt:  SRAGSGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein7.6e-1670.53Show/hide
Query:  LLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAGSGS
        ++S   +++E R+ARKDLGIDLGG+G+GLG G+G+GLGG   GSGSG+G+GSGSGSGS SSSSSSS SSSS SG+G  AGS AGS+AGSRAGSGS
Subjt:  LLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAGSGS

AT4G30460.1 glycine-rich protein7.1e-2264.86Show/hide
Query:  SLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG-AGSEAGSYAGSYAGSRAG
        SL ++  +L+ S +VSE RVARKDLG+DLGG+G G+G GIG+G GGSGSG+G+GSGSG G  S SSSSSSSSS SS  G G AGSEAGSYAGS+AGS +G
Subjt:  SLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSG-AGSEAGSYAGSYAGSRAG

Query:  SGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGG
          S   R  GSG G G+G G G G G GGG G G G GYGEG GYGGG
Subjt:  SGSDRNRNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATCAAGTCCCTTGCCGTTGTTTGTTTTTTACTCTCTTTCTCCGCCATTGTCTCTGAAGGCCGTGTGGCCAGGAAGGATCTCGGCATTGACCTTGGAGGACT
CGGAGTTGGACTCGGAGCTGGAATAGGCTTGGGCTTAGGTGGAAGTGGGTCCGGATCGGGCTCCGGCTCCGGGTCTGGATCCGGATCCGGATCTGGGTCGAGTTCATCTT
CTTCTTCATCATCATACTCCTCCAGCTCCGGGTCCGGAGCTGGGTCCGAAGCAGGGTCCTACGCTGGTTCGTACGCAGGGTCTCGGGCAGGCTCAGGTTCGGATAGGAAC
AGGAATGGAGGTTCGGGGTACGGTTCGGGATACGGCGAAGGTTCAGGCAGAGGAAGCGGCAACGGTGGCGGTGAGGGATATGGGGAAGGCCATGGATACGGCGAGGGACG
TGGTTATGGCGGGGGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATCAAGTCCCTTGCCGTTGTTTGTTTTTTACTCTCTTTCTCCGCCATTGTCTCTGAAGGCCGTGTGGCCAGGAAGGATCTCGGCATTGACCTTGGAGGACT
CGGAGTTGGACTCGGAGCTGGAATAGGCTTGGGCTTAGGTGGAAGTGGGTCCGGATCGGGCTCCGGCTCCGGGTCTGGATCCGGATCCGGATCTGGGTCGAGTTCATCTT
CTTCTTCATCATCATACTCCTCCAGCTCCGGGTCCGGAGCTGGGTCCGAAGCAGGGTCCTACGCTGGTTCGTACGCAGGGTCTCGGGCAGGCTCAGGTTCGGATAGGAAC
AGGAATGGAGGTTCGGGGTACGGTTCGGGATACGGCGAAGGTTCAGGCAGAGGAAGCGGCAACGGTGGCGGTGAGGGATATGGGGAAGGCCATGGATACGGCGAGGGACG
TGGTTATGGCGGGGGCAACTGA
Protein sequenceShow/hide protein sequence
MASIKSLAVVCFLLSFSAIVSEGRVARKDLGIDLGGLGVGLGAGIGLGLGGSGSGSGSGSGSGSGSGSGSSSSSSSSSYSSSSGSGAGSEAGSYAGSYAGSRAGSGSDRN
RNGGSGYGSGYGEGSGRGSGNGGGEGYGEGHGYGEGRGYGGGN