CuGenDBv2

Gene ID	Lag0033790
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ATP-dependent RNA helicase
Genome location	chr3:1853615..1854383
RNA-Seq Expression	Lag0033790
Synteny	Lag0033790
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587786.1 hypothetical protein SDJN03_16351, partial [Cucurbita argyrosperma subsp. sororia]

6.9e-39

60.23

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI     S SPFN  R+PRKG      IEIRERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSF+G  G+VK+V T             EV++ESAANMT E+RIC+TDL      +DQ N T KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

KAG7035711.1 hypothetical protein SDJN02_02509, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-38

59.65

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI     S SPFN  R+PRKG      IEIRERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSF+G  G+VK+V T             EV++ESA NMT E+RIC+TDL      +DQ N T KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

XP_022933890.1 uncharacterized protein LOC111441170 isoform X1 [Cucurbita moschata]

3.1e-39

60.82

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+MV V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI     S SPFN  R+PRKG      IEIRERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSF+G  G+VK+V T             EV++ESAANMT E+RIC+TDL      +DQ N T KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

XP_022968868.1 uncharacterized protein LOC111468025 [Cucurbita maxima]

4.0e-39

60.82

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDC L+APLI     S SPFN  R+PRKG      IEIRERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSFRG  G+VK+V T             EV++ESAANMT E+RIC+TDL      VDQ+N T+KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

XP_023532011.1 uncharacterized protein LOC111794104 [Cucurbita pepo subsp. pepo]

2.0e-38

59.65

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI     S SPFN  R+PRKG      IE RERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSF+G  G+VK+V T             EV++ESAANMT E+RIC+TDL      +DQ N T KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8Y3 uncharacterized protein LOC103487306 isoform X1

1.5e-28

49.46

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Query:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVA
        MAKKMV V   G GG+ KKR+IKR+KKK IHKVIDYLLSDCYL+APL+ S S  +   N + +P +GIEIR R KD RSL+KK +DYLKSDCYMYA LV 
Subjt:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVA

Query:  PQSFR-------GCVGHVKKVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYSNCGSIEGEGRREAKM-RKIVVD
        P+S R       G V + KKV+ EV             +  ++ V+    T   + +R +YSN  S+   G R+ K+ R+IVVD
Subjt:  PQSFR-------GCVGHVKKVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYSNCGSIEGEGRREAKM-RKIVVD

A0A5D3B7P7 Uncharacterized protein

1.5e-28

49.46

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Query:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVA
        MAKKMV V   G GG+ KKR+IKR+KKK IHKVIDYLLSDCYL+APL+ S S  +   N + +P +GIEIR R KD RSL+KK +DYLKSDCYMYA LV 
Subjt:  MAKKMVAV--AGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVA

Query:  PQSFR-------GCVGHVKKVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYSNCGSIEGEGRREAKM-RKIVVD
        P+S R       G V + KKV+ EV             +  ++ V+    T   + +R +YSN  S+   G R+ K+ R+IVVD
Subjt:  PQSFR-------GCVGHVKKVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYSNCGSIEGEGRREAKM-RKIVVD

A0A6J1C0T7 uncharacterized protein LOC111007025 isoform X1

7.2e-34

58.44

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Query:  MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVAPQ
        MAK++V   G+   +KK I+KR KKKTIHKV+DYL+SD YL+APLI    SS+ PFN +RS  KGIE RER KD RSL+KKIEDYLKSDCYMYAPL+ PQ
Subjt:  MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVAPQ

Query:  S-FRGCVGHVKKVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYS
        +  RGC   +KKVTTE+++ESAANM   + ICT D     N  +K+S + +++S
Subjt:  S-FRGCVGHVKKVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYS

A0A6J1F636 uncharacterized protein LOC111441170 isoform X1

1.5e-39

60.82

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+MV V   GG +KKR++K R KKK IHKVIDYLLSDCYL+APLI     S SPFN  R+PRKG      IEIRERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSF+G  G+VK+V T             EV++ESAANMT E+RIC+TDL      +DQ N T KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

A0A6J1HZC1 uncharacterized protein LOC111468025

1.9e-39

60.82

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Query:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDC L+APLI     S SPFN  R+PRKG      IEIRERPKD RS LKK+ DYLKSDCYMY
Subjt:  MAKKMVAVAGSGGVLKKRIIK-RNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKG------IEIRERPKDKRSLLKKIEDYLKSDCYMY

Query:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE
        A LVAPQSFRG  G+VK+V T             EV++ESAANMT E+RIC+TDL      VDQ+N T+KE
Subjt:  APLVAPQSFRGCVGHVKKVTT-------------EVLNESAANMTMEKRICTTDL------VDQENLTSKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G57790.1 unknown protein

6.7e-08

29.57

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Query:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIAS-----------SSSSSSPFNPNRSPRKGIEIR--ERPKDKRSLLKKIEDYLKSDCYMYAPLV-APQS
        +K++ ++  ++ +  ++ YL SD YL+APL ++             S+S P   +    +G E    E+   KR + +K+++YLKSDCYMY+P++ +P  
Subjt:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIAS-----------SSSSSSPFNPNRSPRKGIEIR--ERPKDKRSLLKKIEDYLKSDCYMYAPLV-APQS

Query:  FRGCVGHVKKVTTEV
            V    ++T EV
Subjt:  FRGCVGHVKKVTTEV

AT5G57790.2 unknown protein

6.7e-08

29.57

Show/hide

Query:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIAS-----------SSSSSSPFNPNRSPRKGIEIR--ERPKDKRSLLKKIEDYLKSDCYMYAPLV-APQS
        +K++ ++  ++ +  ++ YL SD YL+APL ++             S+S P   +    +G E    E+   KR + +K+++YLKSDCYMY+P++ +P  
Subjt:  KKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIAS-----------SSSSSSPFNPNRSPRKGIEIR--ERPKDKRSLLKKIEDYLKSDCYMYAPLV-APQS

Query:  FRGCVGHVKKVTTEV
            V    ++T EV
Subjt:  FRGCVGHVKKVTTEV

Sequences

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CDS sequence

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ATGGCGAAAAAAATGGTGGCTGTTGCTGGGAGTGGCGGGGTTTTAAAGAAGAGAATCATCAAGAGGAACAAGAAGAAAACCATTCACAAAGTGATCGATTATCTCTTATC
CGATTGCTACTTATATGCTCCTCTTATTGCTTCTTCTTCTTCTTCTTCCTCACCGTTTAATCCTAATCGCTCACCCAGAAAAGGGATCGAAATCAGAGAACGCCCAAAAG
ATAAGCGGAGTTTGCTGAAGAAGATTGAGGATTATTTGAAATCTGATTGCTACATGTATGCTCCTCTCGTTGCACCCCAATCCTTCAGAGGGTGTGTCGGGCATGTGAAG
AAGGTAACTACGGAAGTTTTGAATGAATCGGCTGCGAATATGACGATGGAGAAGAGAATTTGCACAACTGATTTAGTTGATCAAGAAAATCTGACAAGCAAGGAATCATC
GAAGCGCCGCGTGTATTCAAATTGTGGATCGATTGAAGGAGAAGGAAGGCGTGAGGCAAAGATGAGGAAGATTGTGGTTGATTGA

mRNA sequence

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Protein sequence

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MAKKMVAVAGSGGVLKKRIIKRNKKKTIHKVIDYLLSDCYLYAPLIASSSSSSSPFNPNRSPRKGIEIRERPKDKRSLLKKIEDYLKSDCYMYAPLVAPQSFRGCVGHVK
KVTTEVLNESAANMTMEKRICTTDLVDQENLTSKESSKRRVYSNCGSIEGEGRREAKMRKIVVD

Lag0033790 (gene) of Sponge gourd (AG-4) v1 genome