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Lag0033811 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033811
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:2023583..2023915
RNA-Seq ExpressionLag0033811
SyntenyLag0033811
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]1.8e-2146.36Show/hide
Query:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW-TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG
        ET+L G   E +R Q+ F   F +  +G + GL+LLWN D +V V+SFS GHID ++K      W++TG YGNP      ++W LL RL+   D+PWI G
Subjt:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW-TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG

Query:  GDFNKILQQN
        GDFN+IL  N
Subjt:  GDFNKILQQN

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.8e-2148.96Show/hide
Query:  RVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDWTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKIL
        R + +L F+C  S+ S G + GLMLLWN D +V ++S S GHID++I +K  +W++TG YGNP     + +W LL+RL   MD+PWI+GGDFN+I+
Subjt:  RVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDWTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKIL

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]1.8e-2141.28Show/hide
Query:  METRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW--TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWI
        +ET+L     ER+R +LG +  F++  +G + GL LLW G++ + ++SFS+GH+D++I  +    +W +TG YGNP   + +++W LL+RL+D M +PW+
Subjt:  METRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW--TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWI

Query:  MGGDFNKIL
          GDFN+IL
Subjt:  MGGDFNKIL

XP_028113864.1 uncharacterized protein LOC114311894 [Camellia sinensis]2.4e-2144.44Show/hide
Query:  ERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD--WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKIL
        ER+R +LG +  F++  +  + GL LLW G+L + ++S+SKGH+D++I  +    +WQ+TG YGNPN  +  ++W LL+RL+D M++PW+  GDFN+IL
Subjt:  ERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD--WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKIL

XP_041001573.1 uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]2.4e-2146.73Show/hide
Query:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD-WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG
        ET+L   G E  + +LGF   FSI S+G + GL L+WN DL V ++SFS+ HID  IK +D W W++TG+YGNP +     TW L++ L     IPW++G
Subjt:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD-WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG

Query:  GDFNKIL
        G+FN++L
Subjt:  GDFNKIL

TrEMBL top hitse value%identityAlignment
A0A5B6VIP7 Reverse transcriptase1.7e-2048.62Show/hide
Query:  METRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD--WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWI
        MET+L  +  ERVR + GF CG  + + G   GL L W  D+ V +RSFSK HID +IKE D    W++TGIYG+P +   N  W LLKRL      PW+
Subjt:  METRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD--WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWI

Query:  MGGDFNKIL
        + GDFN+IL
Subjt:  MGGDFNKIL

A0A5C7I5K8 DUF4283 domain-containing protein5.7e-2145.37Show/hide
Query:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD--WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIM
        ET+++ N  E++R  LG++ GF + SIG + GL+LLWN D +V V+SFS GHID  I+ +D  W W+++G+YG PN       W L++RLR+   +PW+ 
Subjt:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKD--WTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIM

Query:  GGDFNKIL
         GDFN++L
Subjt:  GGDFNKIL

A0A6J1DUG8 uncharacterized protein LOC1110241358.9e-2248.96Show/hide
Query:  RVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDWTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKIL
        R + +L F+C  S+ S G + GLMLLWN D +V ++S S GHID++I +K  +W++TG YGNP     + +W LL+RL   MD+PWI+GGDFN+I+
Subjt:  RVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDWTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKIL

A0A7J6DZ24 CCHC-type domain-containing protein8.9e-2246.36Show/hide
Query:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW-TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG
        ET+L G   E +R Q+ F   F +  +G + GL+LLWN D +V V+SFS GHID ++K      W++TG YGNP      ++W LL RL+   D+PWI G
Subjt:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW-TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG

Query:  GDFNKILQQN
        GDFN+IL  N
Subjt:  GDFNKILQQN

A0A7J6FPV7 CCHC-type domain-containing protein2.0e-2145.45Show/hide
Query:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW-TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG
        ET+L G   E +R Q+ F   F +  +G + GL+LLWN D +V V+SFS GHID ++K      W++TG YGNP       +W LL RL+   D+PWI G
Subjt:  ETRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDW-TWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMG

Query:  GDFNKILQQN
        GDFN++L  N
Subjt:  GDFNKILQQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTAGACTGCAAGGTAATGGTGGTGAGAGAGTTAGAAGTCAGTTGGGTTTTGAGTGTGGCTTTTCGATCCCTAGCATCGGATACAACAGAGGTTTGATGCTCTT
ATGGAACGGTGATTTAGATGTAATGGTTAGGTCATTTTCTAAAGGACATATTGATACTGTTATTAAGGAGAAGGATTGGACATGGCAGTATACTGGCATTTATGGTAATC
CTAACATGGGGATGCACAACGAGACTTGGATTCTCCTGAAAAGGCTCCGAGATCATATGGATATTCCTTGGATCATGGGTGGAGACTTTAACAAGATCCTGCAGCAGAAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTAGACTGCAAGGTAATGGTGGTGAGAGAGTTAGAAGTCAGTTGGGTTTTGAGTGTGGCTTTTCGATCCCTAGCATCGGATACAACAGAGGTTTGATGCTCTT
ATGGAACGGTGATTTAGATGTAATGGTTAGGTCATTTTCTAAAGGACATATTGATACTGTTATTAAGGAGAAGGATTGGACATGGCAGTATACTGGCATTTATGGTAATC
CTAACATGGGGATGCACAACGAGACTTGGATTCTCCTGAAAAGGCTCCGAGATCATATGGATATTCCTTGGATCATGGGTGGAGACTTTAACAAGATCCTGCAGCAGAAT
TAA
Protein sequenceShow/hide protein sequence
METRLQGNGGERVRSQLGFECGFSIPSIGYNRGLMLLWNGDLDVMVRSFSKGHIDTVIKEKDWTWQYTGIYGNPNMGMHNETWILLKRLRDHMDIPWIMGGDFNKILQQN