; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033850 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033850
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr3:2303075..2308547
RNA-Seq ExpressionLag0033850
SyntenyLag0033850
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]1.8e-2527.09Show/hide
Query:  HFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPP-SSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGV
        HFD  D   I QIPL      D+ IW F +SG ++VKS Y   Q+ +  R+P   S+SEF +  W  IW LA+  KI+IF+WR + N LP+ + L  R +
Subjt:  HFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPP-SSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGV

Query:  QCGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSL--------------LCEFWIWLLMLSLNVYNFRLARQNRLSSVSRGSNAR
             C  C    E+  H    CK A+++W+ + F   +  A   DI SL              L    +W    + N + F+  R+N  S V++   A 
Subjt:  QCGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSL--------------LCEFWIWLLMLSLNVYNFRLARQNRLSSVSRGSNAR

Query:  PVCRDFK-------------WRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGY-----------------------------R
         V   +K             W PP  G +K+NTDA+ +    +A  G V+RD +GQ        + F G                               
Subjt:  PVCRDFK-------------WRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGY-----------------------------R

Query:  LKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVVVTC
         +++ ++ + +   SE+  ++  + ++    +     +THR  N +AH LA+L +  C
Subjt:  LKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVVVTC

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.6e-3229.04Show/hide
Query:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLA-QSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ
        F  ++   IL IP+      D+ IW +E++G++SV+S Y++A  +    + P SS+SE +R WW   W++ + NKIK+FLWRL  +RLPT   L  RGV+
Subjt:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLA-QSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ

Query:  CGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPL------------LHLASLSDICSLLCEFWIWLLMLSLNVYN---FRLARQ-----NRLSSVSR
          + C FC R  E S+HLFW CKFA  LW  ++F  L            L  A   ++C ++   W      + N      F++  +     N+ +   R
Subjt:  CGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPL------------LHLASLSDICSLLCEFWIWLLMLSLNVYN---FRLARQ-----NRLSSVSR

Query:  GSNARPV------CRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGL--YFSTV-----------FGGYRLKLIRVLWDPENDISEVG
         + + P+        +  W+PP  G+ K+NTDASF      A  G ++ +  GQ       Y   +             G +L     +     D+SE G
Subjt:  GSNARPV------CRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGL--YFSTV-----------FGGYRLKLIRVLWDPENDISEVG

Query:  VLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR
         ++      +            R+ N+ AH LAR
Subjt:  VLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR

XP_023920731.1 uncharacterized protein LOC112032201 [Quercus suber]2.2e-2328.12Show/hide
Query:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRY-PPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ
        F  ED A IL IPL   +  D+ IWA+   G F+V S Y++A S         +S+ E   R+W+ +W L + NKIK+F WR   N LPT   L  R V 
Subjt:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRY-PPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ

Query:  CGHLCVFCHRQPESSLHLFWFCKFARRLW---------QGTRFAP----LLHLASLSDICSLLCEFWI---WLLMLSLNVYNFRLARQNRLSSVSRG---
            C  C+  PE++ HLFW C  A+ +W          G R+      L  L     + + + E  +   W +    N   F  ARQ+    + R    
Subjt:  CGHLCVFCHRQPESSLHLFWFCKFARRLW---------QGTRFAP----LLHLASLSDICSLLCEFWI---WLLMLSLNVYNFRLARQNRLSSVSRG---

Query:  ------SNARP----VCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQ------------------PRVGLYFSTVFG---GYRLKLI---
              ++ RP       D +W PP     K N DA+     GM   G ++RD  G                       L  +T+F    G +  L    
Subjt:  ------SNARP----VCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQ------------------PRVGLYFSTVFG---GYRLKLI---

Query:  -----RVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELA
               L DP N    +  ++A  S   H        H  R+AN+ AH LA
Subjt:  -----RVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELA

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]6.6e-2827.62Show/hide
Query:  HFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ
        HF  ED   I+QIPL      DQ IW +++ G +SVKS Y++A        P  SN +  +  W+ IW+LA+  K+KIFLWR +H+ LPT + L  + V 
Subjt:  HFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ

Query:  CGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSLLCEFW---------------IWLLMLSLNVYNFRLARQNRLSSVSRGSNAR
           +C  CH   E+  H    C  AR++W+ +  A  L      DI  +L +FW               +W +  + N + F   ++N L  V   +NA 
Subjt:  CGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSLLCEFW---------------IWLLMLSLNVYNFRLARQNRLSSVSRGSNAR

Query:  PVCRDFK--------------------WRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFST----------------------------
         +   FK                    W PP  G  K+N DA+    + MA  G V+RDS G  R     S                             
Subjt:  PVCRDFK--------------------WRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFST----------------------------

Query:  -VFGGYRLKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVV
         +F    L++I ++    + ++E+G L++ +       +   A H+ R  N  AH LA+L +
Subjt:  -VFGGYRLKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVV

XP_035545068.1 uncharacterized protein LOC118348173 [Juglans regia]5.8e-2428.61Show/hide
Query:  ILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCH
        IL+IPL +  + D+ +WA E +G FSV+SCYR   S+   +   SSN +  +++WK++W++ V NK+KIF W    + LPT   L+ R V     C  C 
Subjt:  ILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCH

Query:  RQPESSLHLFWFCKFARRLWQGTRFAPLL---HLASLSDICSLLCE--------------FWIW----------LLMLSLNVYN--FRLARQNRLSSVSR
         + E+  H  + C   + LW+   + P L      SL D+   LCE              + +W          +L+ + +V      L R +   S+  
Subjt:  RQPESSLHLFWFCKFARRLWQGTRFAPLL---HLASLSDICSLLCE--------------FWIW----------LLMLSLNVYN--FRLARQNRLSSVSR

Query:  GSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFS---------------TVFGGYR----------------LKLIRV
         S    + + +KW PP+ G LKLN DA+       A  G VLRD  G  R+ + FS                +F G +                L  I  
Subjt:  GSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFS---------------TVFGGYR----------------LKLIRV

Query:  LWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR
        L D     S +GV+   + ++          H +R+ NRVAH+LAR
Subjt:  LWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR

TrEMBL top hitse value%identityAlignment
A0A2H5Q972 Uncharacterized protein (Fragment)8.8e-2627.09Show/hide
Query:  HFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPP-SSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGV
        HFD  D   I QIPL      D+ IW F +SG ++VKS Y   Q+ +  R+P   S+SEF +  W  IW LA+  KI+IF+WR + N LP+ + L  R +
Subjt:  HFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPP-SSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGV

Query:  QCGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSL--------------LCEFWIWLLMLSLNVYNFRLARQNRLSSVSRGSNAR
             C  C    E+  H    CK A+++W+ + F   +  A   DI SL              L    +W    + N + F+  R+N  S V++   A 
Subjt:  QCGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSL--------------LCEFWIWLLMLSLNVYNFRLARQNRLSSVSRGSNAR

Query:  PVCRDFK-------------WRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGY-----------------------------R
         V   +K             W PP  G +K+NTDA+ +    +A  G V+RD +GQ        + F G                               
Subjt:  PVCRDFK-------------WRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGY-----------------------------R

Query:  LKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVVVTC
         +++ ++ + +   SE+  ++  + ++    +     +THR  N +AH LA+L +  C
Subjt:  LKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVVVTC

A0A6J1DAR4 uncharacterized protein LOC1110189541.3e-3229.04Show/hide
Query:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLA-QSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ
        F  ++   IL IP+      D+ IW +E++G++SV+S Y++A  +    + P SS+SE +R WW   W++ + NKIK+FLWRL  +RLPT   L  RGV+
Subjt:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLA-QSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQ

Query:  CGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPL------------LHLASLSDICSLLCEFWIWLLMLSLNVYN---FRLARQ-----NRLSSVSR
          + C FC R  E S+HLFW CKFA  LW  ++F  L            L  A   ++C ++   W      + N      F++  +     N+ +   R
Subjt:  CGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAPL------------LHLASLSDICSLLCEFWIWLLMLSLNVYN---FRLARQ-----NRLSSVSR

Query:  GSNARPV------CRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGL--YFSTV-----------FGGYRLKLIRVLWDPENDISEVG
         + + P+        +  W+PP  G+ K+NTDASF      A  G ++ +  GQ       Y   +             G +L     +     D+SE G
Subjt:  GSNARPV------CRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGL--YFSTV-----------FGGYRLKLIRVLWDPENDISEVG

Query:  VLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR
         ++      +            R+ N+ AH LAR
Subjt:  VLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR

A0A803P9P5 Uncharacterized protein5.0e-2927.61Show/hide
Query:  DRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLC
        D A+I  IPL     SDQ IW FE +G++SVKS Y LA    L    P+++S    +WWK  W L + +KIKIFLWR  H+ LP  D L  R +    +C
Subjt:  DRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLC

Query:  VFCHRQPESSLHLFWFCKFARRLWQGTRFAP---LLHLASLSDICSLLCEFW-----------IWLLMLSLN---------------------VYNFRLA
          CH+  ES+ H  ++CK  R++WQ + F+    + H  SL D+   + + W           +W +    N                     +  F+ A
Subjt:  VFCHRQPESSLHLFWFCKFARRLWQGTRFAP---LLHLASLSDICSLLCEFW-----------IWLLMLSLN---------------------VYNFRLA

Query:  RQN-RLSSVSRGSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSG--------------QPRVGLYFSTVFGGYRLK----------
        R N   +  +  +  R   ++  W  P  G LKLNTDA+ + +   +  G +LR+ +G              +P +    + ++    LK          
Subjt:  RQN-RLSSVSRGSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSG--------------QPRVGLYFSTVFGGYRLK----------

Query:  -----LIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR
             +++ L   +  IS+   L+  +S +          HT+R AN  AH LA+
Subjt:  -----LIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR

A0A803PVI9 Uncharacterized protein1.5e-2529.82Show/hide
Query:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQC
        F + D  ++LQIPL     SDQ IW FE +G ++VKS Y LA S  L    P+++    + WW   W L + +K++IFLWR  ++ LPT   L  R +  
Subjt:  FDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQC

Query:  GHLCVFCHRQPESSLHLFWFCKFARRLWQGTRF--APLLH--------LASLSDICS-LLCEFWIWLLMLSLNVYN------------------------
          +C+ C    E++ H  ++CK  R++W+ + F  +P++         +  +SD+ S L  E +I +L L  N  N                        
Subjt:  GHLCVFCHRQPESSLHLFWFCKFARRLWQGTRF--APLLH--------LASLSDICS-LLCEFWIWLLMLSLNVYN------------------------

Query:  FRLARQNRLSSVSRGS-NARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGYRLKLIRVL
        ++ A++ + ++    S N     +D  W  P  G LKLNTDA+ +Q +     G +LRDS+G+  V  +   V G +R +++  L
Subjt:  FRLARQNRLSSVSRGS-NARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGYRLKLIRVL

A0A803QJ22 Uncharacterized protein2.8e-2427.09Show/hide
Query:  DRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLC
        D A I  IPL      D  IW  E +G++SVKS Y LA    L    P S+    + WWK  W L + +KI+IFLWR  H+ LP  D L +R +     C
Subjt:  DRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLC

Query:  VFCHRQPESSLHLFWFCKFARRLWQGTRFA-------------PLLHLAS------LSDICSLLCEFW------------------IWLLMLSLNVYNFR
          C+R  E+  H  + CK  +++WQ + F+               L ++S      L    ++L   W                  ++  +  ++ Y+  
Subjt:  VFCHRQPESSLHLFWFCKFARRLWQGTRFA-------------PLLHLAS------LSDICSLLCEFW------------------IWLLMLSLNVYNFR

Query:  LARQNRLSSVSRGSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGY--------------------------
          RQ   SS     +   V +D  W  P  G LKLNTDA+ + +   +  G VLRD SGQ  +    ST F G                           
Subjt:  LARQNRLSSVSRGSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQPRVGLYFSTVFGGY--------------------------

Query:  -----RLKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR
              L +++ L      +S+   L+  +S +          H +R AN  AH LAR
Subjt:  -----RLKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELAR

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.5e-1124.3Show/hide
Query:  VEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGH
        +E RA +L +   A    D+  W F + G FSV+S Y +   + +    P  N   M  ++  +W++ V  ++K FLW + +  + T ++   R +   +
Subjt:  VEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGH

Query:  LCVFCHRQPESSLHLFWFCKFARRLW---------QGTRFAPLLH--LASLSDICSLLCEFWIWLLMLSL-----------NVYNFRLARQNRLSSVSR-
        +C  C    ES LH+   C     +W         QG     L      +L D     CE   W  + ++           N++      ++R+  V   
Subjt:  LCVFCHRQPESSLHLFWFCKFARRLW---------QGTRFAPLLH--LASLSDICSLLCEFWIWLLMLSL-----------NVYNFRLARQNRLSSVSR-

Query:  --------------GSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSG--------------QPRV---GLYFSTVFGGYRLKLIRV
                      G     V R   W  P  G +K+NTD +     G+ASAG VLRD +G               P+    G+Y+   F  +  K+ RV
Subjt:  --------------GSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSG--------------QPRV---GLYFSTVFGGYRLKLIRV

Query:  LWDPENDISEVGVLMAAVS---------RMFHG----DEFGGAFHTHRKANRVAHELA
          + ++++  VG L   +S         R+ HG    D      H +R+ANR+A  LA
Subjt:  LWDPENDISEVGVLMAAVS---------RMFHG----DEFGGAFHTHRKANRVAHELA

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.6e-0633.82Show/hide
Query:  WWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCHRQPESSLHLFWFCKFARRLWQ
        W+K +W    + K     W ++ NRL T D+L S G+    +C+ C+   ES  HLF+ C F   +W+
Subjt:  WWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCHRQPESSLHLFWFCKFARRLWQ

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-0738.81Show/hide
Query:  WWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCHRQPESSLHLFWFCKFARRLW
        W+K IW    + K     W    +RL T D++IS G     LC+FC+   E+  HLF+ C+FAR +W
Subjt:  WWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCHRQPESSLHLFWFCKFARRLW

AT3G09510.1 Ribonuclease H-like superfamily protein8.1e-1625.65Show/hide
Query:  DVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRL----AQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRG
        D  D   I +I L  S+  D+ IW +  +G ++V+S Y L      + I    PP  + +   R    IW L ++ K+K FLWR     L T ++L +RG
Subjt:  DVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRL----AQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRG

Query:  VQCGHLCVFCHRQPESSLHLFWFCKFARRLWQ----------------GTRFAPLLHL---ASLSDICSLLCEFWIWLLMLSLNVYNFRLARQNRLSSV-
        ++    C  CHR+ ES  H  + C FA   W+                    + +L+     ++SD   LL  + IW +  + N   F   R++   +V 
Subjt:  VQCGHLCVFCHRQPESSLHLFWFCKFARRLWQ----------------GTRFAPLLHL---ASLSDICSLLCEFWIWLLMLSLNVYNFRLARQNRLSSV-

Query:  -----------------SRGSNARPVCRD-FKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQP
                            S  R +  +  +WR P    +K N DA F      A+ G ++R+  G P
Subjt:  -----------------SRGSNARPVCRD-FKWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQP

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-0628.04Show/hide
Query:  KSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAP
        K C+   ++    R P     +    W+K +W      K  +  W    NRL T D+++S        CV CH   E+  HLF+ C ++  +   TR+  
Subjt:  KSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCHRQPESSLHLFWFCKFARRLWQGTRFAP

Query:  LLHLASL
         L L SL
Subjt:  LLHLASL

AT4G29090.1 Ribonuclease H-like superfamily protein4.2e-1225.47Show/hide
Query:  MHFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSE-FMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRG
        M F   +R  I ++     R+ D   W +  SG ++VKS Y +    I  R  P   SE  +   ++ IW+     KI+ FLW+   N LP    L  R 
Subjt:  MHFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSE-FMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRG

Query:  VQCGHLCVFCHRQPESSLHLFWFCKFARRLWQ--------GTRFAPLLHL-----------ASLSDICSLLCEFWIWLLMLSLNVYNFRLARQN------
        +     C+ C    E+  HL + C FAR  W         G  +A  +++               +  S L  + +W L  + N   FR    N      
Subjt:  VQCGHLCVFCHRQPESSLHLFWFCKFARRLWQ--------GTRFAPLLHL-----------ASLSDICSLLCEFWIWLLMLSLNVYNFRLARQN------

Query:  ---------RLSSVSRGSNARP-VCRDF--KWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQ
                 R+ + +     +P V R    +WRPP    +K NTDA++++ +     G VLR+  G+
Subjt:  ---------RLSSVSRGSNARP-VCRDF--KWRPPAGGVLKLNTDASFHQLSGMASAGCVLRDSSGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTTGATGTTGAGGATCGAGCTCGTATTTTGCAAATTCCGTTGAGGGCTTCTAGATTGTCTGATCAACCGATTTGGGCTTTTGAAGAATCTGGTCTTTTCTCGGT
GAAAAGTTGTTATCGGTTGGCGCAATCTGAGATCCTTCATAGGTACCCACCCTCATCAAATTCTGAGTTTATGCGGCGCTGGTGGAAGAATATATGGCAGTTAGCAGTCC
TAAATAAGATCAAGATCTTTTTGTGGCGCCTTTCGCATAATCGTTTGCCTACTTGTGACAAGTTGATCTCTCGTGGTGTCCAATGTGGCCATTTGTGTGTGTTTTGCCAT
CGCCAACCTGAATCGAGTTTACATTTGTTCTGGTTTTGTAAGTTTGCTCGTCGGCTTTGGCAGGGTACTCGGTTTGCTCCGTTGTTGCATTTGGCTTCGTTGTCTGATAT
CTGTTCACTATTGTGTGAGTTCTGGATTTGGCTGCTTATGTTGAGTCTTAATGTCTATAATTTCAGGTTGGCTCGACAGAATCGACTCTCTTCTGTTTCGAGGGGGAGTA
ATGCTCGACCTGTGTGTAGAGATTTTAAGTGGCGGCCTCCAGCAGGTGGTGTTTTGAAGCTAAATACTGATGCTTCTTTTCACCAACTGTCGGGTATGGCTTCCGCAGGT
TGTGTCCTTCGTGACTCTAGTGGACAGCCGAGAGTCGGGTTGTATTTCAGCACGGTTTTCGGAGGATACAGATTGAAGCTGATTCGTGTGTTGTGGGACCCTGAGAATGA
TATCTCTGAGGTTGGTGTTTTGATGGCTGCGGTTAGCCGGATGTTTCATGGTGATGAATTTGGTGGTGCTTTCCATACCCACCGAAAAGCCAATAGAGTAGCGCATGAGC
TTGCTCGTTTGGTTGTGGTTACATGCTTAAACATTCAAGTAGATTTCATCGTCCTCCAGTGTTCAACTTCGAGTAGGGAATTAGTTTTCTTTTTGTCCGTAGACTTTAAT
TATCAAGGGATCGACTCAGAGGAAGACCAGACCAAATGGGTCGAGCCAATTGGGCTCGACCCACATGGTCAGCCTCGGCCCAAGGCCGAGGCCGAGCTCGTTAGCCTCCT
ATCGATCCCTATTGCCTCCATATGCCCCGGTTTTACCTGGTTTGTCTCGAAACGCCTCAGAATCCCTAAAAGCCCTAGGAGGATGAGCAGGTATTTATACCCCTCTTCGC
CACTGAAGAAGGGAACTCAAACTCTAATCCCGAAACTCGTTCTATATTCTCTACTCTCTCCTCTTGCTCTTACTTTTCCACTCCCCACCGTTCTGCTTGCTGACTTAAGT
ATCGGAGCCGGTGTGGCGAGCACCACACCGATGTGCAGGTTTACTGTCTTGCAGGTCACATCTTCACCCTTTTCTACAAATTTTACCGTTGGTGGCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTTGATGTTGAGGATCGAGCTCGTATTTTGCAAATTCCGTTGAGGGCTTCTAGATTGTCTGATCAACCGATTTGGGCTTTTGAAGAATCTGGTCTTTTCTCGGT
GAAAAGTTGTTATCGGTTGGCGCAATCTGAGATCCTTCATAGGTACCCACCCTCATCAAATTCTGAGTTTATGCGGCGCTGGTGGAAGAATATATGGCAGTTAGCAGTCC
TAAATAAGATCAAGATCTTTTTGTGGCGCCTTTCGCATAATCGTTTGCCTACTTGTGACAAGTTGATCTCTCGTGGTGTCCAATGTGGCCATTTGTGTGTGTTTTGCCAT
CGCCAACCTGAATCGAGTTTACATTTGTTCTGGTTTTGTAAGTTTGCTCGTCGGCTTTGGCAGGGTACTCGGTTTGCTCCGTTGTTGCATTTGGCTTCGTTGTCTGATAT
CTGTTCACTATTGTGTGAGTTCTGGATTTGGCTGCTTATGTTGAGTCTTAATGTCTATAATTTCAGGTTGGCTCGACAGAATCGACTCTCTTCTGTTTCGAGGGGGAGTA
ATGCTCGACCTGTGTGTAGAGATTTTAAGTGGCGGCCTCCAGCAGGTGGTGTTTTGAAGCTAAATACTGATGCTTCTTTTCACCAACTGTCGGGTATGGCTTCCGCAGGT
TGTGTCCTTCGTGACTCTAGTGGACAGCCGAGAGTCGGGTTGTATTTCAGCACGGTTTTCGGAGGATACAGATTGAAGCTGATTCGTGTGTTGTGGGACCCTGAGAATGA
TATCTCTGAGGTTGGTGTTTTGATGGCTGCGGTTAGCCGGATGTTTCATGGTGATGAATTTGGTGGTGCTTTCCATACCCACCGAAAAGCCAATAGAGTAGCGCATGAGC
TTGCTCGTTTGGTTGTGGTTACATGCTTAAACATTCAAGTAGATTTCATCGTCCTCCAGTGTTCAACTTCGAGTAGGGAATTAGTTTTCTTTTTGTCCGTAGACTTTAAT
TATCAAGGGATCGACTCAGAGGAAGACCAGACCAAATGGGTCGAGCCAATTGGGCTCGACCCACATGGTCAGCCTCGGCCCAAGGCCGAGGCCGAGCTCGTTAGCCTCCT
ATCGATCCCTATTGCCTCCATATGCCCCGGTTTTACCTGGTTTGTCTCGAAACGCCTCAGAATCCCTAAAAGCCCTAGGAGGATGAGCAGGTATTTATACCCCTCTTCGC
CACTGAAGAAGGGAACTCAAACTCTAATCCCGAAACTCGTTCTATATTCTCTACTCTCTCCTCTTGCTCTTACTTTTCCACTCCCCACCGTTCTGCTTGCTGACTTAAGT
ATCGGAGCCGGTGTGGCGAGCACCACACCGATGTGCAGGTTTACTGTCTTGCAGGTCACATCTTCACCCTTTTCTACAAATTTTACCGTTGGTGGCACGTGA
Protein sequenceShow/hide protein sequence
MHFDVEDRARILQIPLRASRLSDQPIWAFEESGLFSVKSCYRLAQSEILHRYPPSSNSEFMRRWWKNIWQLAVLNKIKIFLWRLSHNRLPTCDKLISRGVQCGHLCVFCH
RQPESSLHLFWFCKFARRLWQGTRFAPLLHLASLSDICSLLCEFWIWLLMLSLNVYNFRLARQNRLSSVSRGSNARPVCRDFKWRPPAGGVLKLNTDASFHQLSGMASAG
CVLRDSSGQPRVGLYFSTVFGGYRLKLIRVLWDPENDISEVGVLMAAVSRMFHGDEFGGAFHTHRKANRVAHELARLVVVTCLNIQVDFIVLQCSTSSRELVFFLSVDFN
YQGIDSEEDQTKWVEPIGLDPHGQPRPKAEAELVSLLSIPIASICPGFTWFVSKRLRIPKSPRRMSRYLYPSSPLKKGTQTLIPKLVLYSLLSPLALTFPLPTVLLADLS
IGAGVASTTPMCRFTVLQVTSSPFSTNFTVGGT