; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationchr3:2319908..2323999
RNA-Seq ExpressionLag0033853
SyntenyLag0033853
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]1.9e-14793.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFVIDGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNTRLRKQQSSSMTTQPQM N SN+P+KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGD WKS+EQMVLDFLQLPSCD+ERGAHRDVIAQQLKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_011656845.1 replication protein A 32 kDa subunit B [Cucumis sativus]3.2e-14794.22Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFVIDGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNTRLRKQQSSSMTTQPQM N SN+PMK YQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGD WKS+EQMVLDFLQLPSCD+ERGAHRDVIAQQLKVPLEKL+PAMKNLEEEGLIYSTTDDFHFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_022988280.1 replication protein A 32 kDa subunit B [Cucurbita maxima]6.7e-14591.7Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFV+DGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNTRLRKQQSSSMT QPQM N SN+P++GYQ P+ N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGDGWK++EQMVLDFLQLPSCD ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_023516911.1 replication protein A 32 kDa subunit B-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-14592.42Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFV+DGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNTRLRKQQSSSMT QPQM N SN+P++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QYSGQAGGDGWK++EQMVLDFLQLPSCD ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

XP_038880298.1 replication protein A 32 kDa subunit B [Benincasa hispida]1.8e-14593.5Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFVIDGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTG ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNTRLRKQQ SS+ TQPQM N SN+PMKGYQAP+ N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGDGWKS+EQMVLDFLQLPSCD+ERGAHRDVIAQQLKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like9.1e-14893.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFVIDGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNTRLRKQQSSSMTTQPQM N SN+P+KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGD WKS+EQMVLDFLQLPSCD+ERGAHRDVIAQQLKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like9.1e-14893.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFVIDGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIE IYVHFYNTRLRKQQSSSMTTQPQM N SN+P+KGYQAPI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGD WKS+EQMVLDFLQLPSCD+ERGAHRDVIAQQLKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A6J1E235 replication protein A 32 kDa subunit B-like isoform X21.5e-14290.97Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFV+DGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNTRLR QQSSSMT QPQM N SN+P++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGDGWK++EQMVLDFLQLPSCD ERGAHRDVIAQ L VPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X11.6e-14491.34Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFV+DGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNTRLRKQQSSSMT QPQM N SN+P++GYQ PI N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGDGWK++EQMVLDFLQLPSCD ERGAHRDVIAQ L VPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

A0A6J1JJ51 replication protein A 32 kDa subunit B3.2e-14591.7Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQIN+AFLSSDDKSNFV+DGVDVNNVKL+GMVRNRAGRITDVTF+LDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIE IYVHFYNTRLRKQQSSSMT QPQM N SN+P++GYQ P+ N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPN

Query:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
        QY+GQAGGDGWK++EQMVLDFLQLPSCD ERGAHRDVIAQ LKVPLEKL+PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C9.3e-2534.8Show/hide
Query:  FSGGGFMPSQTTQAPDHSF-----------SPAKNRD--VQALLPLTVKQINNAF---LSSDDKSN--FVIDGVDVNNVKLIGMVRNRAGRITDVTFSLD
        FSG   MPSQ + AP   +           SP+K RD      +P TV  I+ +F   L++D   +  F IDGV+  NV+++G V +   R TDV F+LD
Subjt:  FSGGGFMPSQTTQAPDHSF-----------SPAKNRD--VQALLPLTVKQINNAF---LSSDDKSN--FVIDGVDVNNVKLIGMVRNRAGRITDVTFSLD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHF--YNTRLRKQQSSSMTTQPQMPNASNSPM
        D TG+I   +W+ + +D+ +   I +G+YV+V  +L  FQ K+     SIRP+ ++NE+  HFIEC++VH     +++++Q   S+ T       S+  +
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHF--YNTRLRKQQSSSMTTQPQMPNASNSPM

Query:  KGYQ
        + YQ
Subjt:  KGYQ

Q6H7J5 Replication protein A 32 kDa subunit B2.6e-5137.85Show/hide
Query:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLD
        G  +DG     ++ F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI +A  ++DDKSNF ++G++V+ V+L+G + N+  R+TDV+F+LD
Subjt:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKG
        DGTGR+  ++W N++ D+ E+  I +G YV V+G LK FQGKR +  +S+R +T++N++T HF+ C++VH   TR + Q +++  T           M  
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKG

Query:  YQAPIPNQYS----GQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG
         Q+P+ NQ S     Q  G G   ++ ++  F      +++ G   D ++++L +P E +   + +  + G +Y+T DD H+KST NG
Subjt:  YQAPIPNQYS----GQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A1.5e-4337.89Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNA---FLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGT
        MM  SQ D   AFS   F  SQ   A   S +P+K+R   + +PLTVKQI+ A    ++ +  + FV+DGV+  NV+L+G+V  +  R TDV+F++DDGT
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNA---FLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGT

Query:  GRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQA
        GR+D  +WVN+ ADS E   + +GMYV V G LK  Q ++    F+IRPVTDYNE+T HFI+C+ +H  NT  + Q  S   T   M ++S++       
Subjt:  GRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQA

Query:  PI-----PNQYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN
        P      P        G       +++  F +  + ++E G H D I ++ ++P  K+  A+  L + G IYST D+ H+KS  N
Subjt:  PI-----PNQYSGQAGGDGWKSVEQMVLDFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN

Q8LFJ8 Replication protein A 32 kDa subunit B5.1e-7150.36Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ+++A  S+  +SNF IDGVD+  V ++G +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLR--KQQSSSMTTQPQMP-NASNSPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI  HF EC+YVH YNT+LR       + T +PQMP +   +P K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLR--KQQSSSMTTQPQMP-NASNSPMKGYQAP

Query:  IPNQYSGQAGGDGWKSVEQMVLDFLQLP-SCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN
          NQ+  Q   D    V+Q VL++L  P    +E G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IPNQYSGQAGGDGWKSVEQMVLDFLQLP-SCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN

Q9ZQ19 Replication protein A 32 kDa subunit A8.9e-6847.29Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNR-AGRITDVTFSLDDGTGR
        M   SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI   F SS +KS  VI+G+ + NV L+G+V ++   ++T+V F+LDDGTGR
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNR-AGRITDVTFSLDDGTGR

Query:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMT--TQPQMPNASNSPMKGYQA
        IDC +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IECI+ +  N+  ++QQ   +T          SN+       
Subjt:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMT--TQPQMPNASNSPMKGYQA

Query:  PIPNQYSGQAGGDGWKSVEQMVLDFLQLPSCD-NERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFK
        P+ +  +    G+G K+++ M+LD+L+ P+C   ++G H D IAQQLK+P  KL   +++LE +GLIYST D++HFK
Subjt:  PIPNQYSGQAGGDGWKSVEQMVLDFLQLPSCD-NERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFK

Arabidopsis top hitse value%identityAlignment
AT1G07130.1 Nucleic acid-binding, OB-fold-like protein1.4e-0422.79Show/hide
Query:  LTVKQINNAFLSSDDKSNF-VIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRIDCSKWVNEAADS------------------NEVEGILDGMYVR
        L  + I     S  + ++F ++ G  V+ V+++G + +R      + F +DDGTG + C  W+N+   S                   +   I  G   R
Subjt:  LTVKQINNAFLSSDDKSNF-VIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRIDCSKWVNEAADS------------------NEVEGILDGMYVR

Query:  VHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECI
        V G + S++G   +         D N    H++EC+
Subjt:  VHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECI

AT2G24490.1 replicon protein A26.3e-6947.29Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNR-AGRITDVTFSLDDGTGR
        M   SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI   F SS +KS  VI+G+ + NV L+G+V ++   ++T+V F+LDDGTGR
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNR-AGRITDVTFSLDDGTGR

Query:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMT--TQPQMPNASNSPMKGYQA
        IDC +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IECI+ +  N+  ++QQ   +T          SN+       
Subjt:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMT--TQPQMPNASNSPMKGYQA

Query:  PIPNQYSGQAGGDGWKSVEQMVLDFLQLPSCD-NERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFK
        P+ +  +    G+G K+++ M+LD+L+ P+C   ++G H D IAQQLK+P  KL   +++LE +GLIYST D++HFK
Subjt:  PIPNQYSGQAGGDGWKSVEQMVLDFLQLPSCD-NERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFK

AT2G24490.2 replicon protein A26.3e-6947.29Show/hide
Query:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNR-AGRITDVTFSLDDGTGR
        M   SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI   F SS +KS  VI+G+ + NV L+G+V ++   ++T+V F+LDDGTGR
Subjt:  MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNR-AGRITDVTFSLDDGTGR

Query:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMT--TQPQMPNASNSPMKGYQA
        IDC +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IECI+ +  N+  ++QQ   +T          SN+       
Subjt:  IDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMT--TQPQMPNASNSPMKGYQA

Query:  PIPNQYSGQAGGDGWKSVEQMVLDFLQLPSCD-NERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFK
        P+ +  +    G+G K+++ M+LD+L+ P+C   ++G H D IAQQLK+P  KL   +++LE +GLIYST D++HFK
Subjt:  PIPNQYSGQAGGDGWKSVEQMVLDFLQLPSCD-NERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFK

AT3G02920.1 Replication protein A, subunit RPA323.6e-7250.36Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ+++A  S+  +SNF IDGVD+  V ++G +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLR--KQQSSSMTTQPQMP-NASNSPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI  HF EC+YVH YNT+LR       + T +PQMP +   +P K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLR--KQQSSSMTTQPQMP-NASNSPMKGYQAP

Query:  IPNQYSGQAGGDGWKSVEQMVLDFLQLP-SCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN
          NQ+  Q   D    V+Q VL++L  P    +E G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  IPNQYSGQAGGDGWKSVEQMVLDFLQLP-SCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA326.3e-6947.67Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRN
        MYG  FDGNAAF+GGGFMPSQ TTQA + S                    S  +NRDV+ LLPLT+KQ+++A  S+  +SNF IDGVD+  V ++G +  
Subjt:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRN

Query:  RAGRITDVTFSLDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLR--KQQSSSMT
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI  HF EC+YVH YNT+LR       + T
Subjt:  RAGRITDVTFSLDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLR--KQQSSSMT

Query:  TQPQMP-NASNSPMKGYQAPIPNQYSGQAGGDGWKSVEQMVLDFLQLP-SCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN
         +PQMP +   +P K YQ    NQ+  Q   D    V+Q VL++L  P    +E G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Subjt:  TQPQMP-NASNSPMKGYQAPIPNQYSGQAGGDGWKSVEQMVLDFLQLP-SCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTACGGAAGTCAATTCGATGGAAACGCTGCCTTCTCCGGTGGCGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCATTCCTTCTCTCCGGCGAAAAATCG
AGATGTTCAAGCATTGCTTCCGTTAACAGTGAAGCAGATAAACAACGCATTCCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAATAATGTTA
AGCTTATTGGGATGGTGCGCAATAGAGCAGGAAGAATTACTGATGTTACTTTTTCACTGGATGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCG
GATTCAAATGAAGTTGAAGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTGAAAAGCTTCCAGGGTAAAAGAACTTTGAATGTCTTTTCTATCAGGCCTGT
GACTGACTACAATGAGATCACAAGTCACTTCATCGAATGCATATATGTTCATTTTTACAATACTAGATTACGGAAACAACAAAGTAGCAGTATGACTACTCAGCCACAGA
TGCCAAATGCATCTAATTCGCCTATGAAAGGATATCAAGCTCCCATTCCAAATCAATACTCCGGTCAAGCAGGTGGTGATGGTTGGAAAAGCGTTGAGCAGATGGTTTTA
GATTTTTTGCAACTTCCTTCATGCGATAATGAGAGGGGCGCACACCGTGATGTCATTGCTCAACAACTTAAAGTTCCACTAGAGAAGCTGCTTCCAGCGATGAAAAATCT
AGAAGAGGAAGGCCTAATCTACTCAACAACTGATGATTTCCACTTCAAATCAACCGCCAACGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTACGGAAGTCAATTCGATGGAAACGCTGCCTTCTCCGGTGGCGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCATTCCTTCTCTCCGGCGAAAAATCG
AGATGTTCAAGCATTGCTTCCGTTAACAGTGAAGCAGATAAACAACGCATTCCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAATAATGTTA
AGCTTATTGGGATGGTGCGCAATAGAGCAGGAAGAATTACTGATGTTACTTTTTCACTGGATGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCG
GATTCAAATGAAGTTGAAGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTGAAAAGCTTCCAGGGTAAAAGAACTTTGAATGTCTTTTCTATCAGGCCTGT
GACTGACTACAATGAGATCACAAGTCACTTCATCGAATGCATATATGTTCATTTTTACAATACTAGATTACGGAAACAACAAAGTAGCAGTATGACTACTCAGCCACAGA
TGCCAAATGCATCTAATTCGCCTATGAAAGGATATCAAGCTCCCATTCCAAATCAATACTCCGGTCAAGCAGGTGGTGATGGTTGGAAAAGCGTTGAGCAGATGGTTTTA
GATTTTTTGCAACTTCCTTCATGCGATAATGAGAGGGGCGCACACCGTGATGTCATTGCTCAACAACTTAAAGTTCCACTAGAGAAGCTGCTTCCAGCGATGAAAAATCT
AGAAGAGGAAGGCCTAATCTACTCAACAACTGATGATTTCCACTTCAAATCAACCGCCAACGGTTGA
Protein sequenceShow/hide protein sequence
MMYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINNAFLSSDDKSNFVIDGVDVNNVKLIGMVRNRAGRITDVTFSLDDGTGRIDCSKWVNEAA
DSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIECIYVHFYNTRLRKQQSSSMTTQPQMPNASNSPMKGYQAPIPNQYSGQAGGDGWKSVEQMVL
DFLQLPSCDNERGAHRDVIAQQLKVPLEKLLPAMKNLEEEGLIYSTTDDFHFKSTANG