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Lag0033895 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033895
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransmembrane protein 230
Genome locationchr3:2766975..2767373
RNA-Seq ExpressionLag0033895
SyntenyLag0033895
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]6.2e-4894.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLL FGM+GI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]8.2e-4894.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]2.8e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]4.8e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLL FGM+GIIVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]1.3e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLLVFGM+GI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2303.9e-4894.17Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2301.4e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2302.3e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLL FGM+GIIVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2302.3e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSP+TVNNRPP+KEIALAVSLL FGM+GIIVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2303.3e-4792.23Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSP+ VNNRPP+KEIALAVSLLVFGM+GI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2304.9e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2301.4e-1048.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L + G   II+G  + +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)7.6e-4480.58Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+M+ + YTV+NRPPVKEI+LAV LLVFG LGI++G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)5.9e-1242.22Show/hide
Query:  DEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        D D   D      +R P K IALAV LL  G L +++  F+    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  DEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)1.6e-4685.44Show/hide
Query:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIM+++ YTVNNRPPVKEIALAV+LLVFG LGI+ G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTATACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCT
TGTTTATTCCGGGTTTCTATTACACTCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTATACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCT
TGTTTATTCCGGGTTTCTATTACACTCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAA
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPYTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV