; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0033914 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033914
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:2911590..2912306
RNA-Seq ExpressionLag0033914
SyntenyLag0033914
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]4.7e-3036.31Show/hide
Query:  EDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFDR
        E+L+ +  +  L  EE  ++  G  + V     +  C++GK+  ++ V  E  R  M+ AWR     ++ES G+N+F  +F SK EK R++  G W FDR
Subjt:  EDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFDR

Query:  SLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPL
        SL+++ EP   G V   +F    FWVQ+HN+P+    KE+ Q +GG+IG V+EV     G+  GS +R+R+++ + RPL
Subjt:  SLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.7e-3839.78Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+++   W  +K T++E E V    G  +L+  ++ LCV+ K+ +SKR++ EA R VM++ WR H + R E  G N++ I F+S  EK RV+S+G W F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK
        +SL++L  P +    LD+ FN CAFW+Q+HN+P    + EMA  LG K+G V+E+ G     W G  +R+RV + + +PL+
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.9e-3235.91Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+++   W ++ LT E+ E +       +++  ++    +GK+ +SKR++VEAFR VM++ W+ H +  IE+AG NL+ I F+S  EK RV+++G W+F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK
         SL++L  P +     D+ FN  A W+Q+H +P +   K+MA+ LG +IG V+E+  +   +WTG  +R+RV + + +P K
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]9.7e-3639.78Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+D+   W ++ L  EE + +       +L+V ++ LC +GK+  SKR+ VEAF  VM+  W+ H + RIE+AG N++ I F++  EK+RV S G W FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK
        +SL+IL    +A   LD++ + CAFWVQ+H +     TK+MA+ LG ++G V+EV G    DW    L +RV + + +PL+
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]5.5e-3140.65Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+++   W ++ LT+EE E         +L+  ++ LC +GK+ +SKR++ +A   VM+  W+ H + RIE+AG N++ I F++  EK RV+S+G W FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEV
        +SL +L  P +A   LDV+F  CAFWVQ+H +P  + T++MA+ LG ++G V+EV
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEV

TrEMBL top hitse value%identityAlignment
A0A5C7HYU7 CCHC-type domain-containing protein9.5e-2938.82Show/hide
Query:  VGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFDRSLVILKEPRSAGSVLDVEFNDCAFWVQVHN
        V  L LC++GKV +++ +N E FR+V+   W+   +I IE   EN+F   F+++ ++ RV++ G W+FD  L++L  P   G +L++ FN  AFWVQ+HN
Subjt:  VGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFDRSLVILKEPRSAGSVLDVEFNDCAFWVQVHN

Query:  VPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLKGV
        V +   TK++   LG  IG V+E+     GD  G  LR+RV + +D+PL+ +
Subjt:  VPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLKGV

A0A6J1D765 uncharacterized protein LOC1110179021.3e-3839.78Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+++   W  +K T++E E V    G  +L+  ++ LCV+ K+ +SKR++ EA R VM++ WR H + R E  G N++ I F+S  EK RV+S+G W F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK
        +SL++L  P +    LD+ FN CAFW+Q+HN+P    + EMA  LG K+G V+E+ G     W G  +R+RV + + +PL+
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK

A0A6J1DP89 uncharacterized protein LOC1110229321.4e-3235.91Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+++   W ++ LT E+ E +       +++  ++    +GK+ +SKR++VEAFR VM++ W+ H +  IE+AG NL+ I F+S  EK RV+++G W+F+
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK
         SL++L  P +     D+ FN  A W+Q+H +P +   K+MA+ LG +IG V+E+  +   +WTG  +R+RV + + +P K
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK

A0A6J1DVS4 uncharacterized protein LOC1110235554.7e-3639.78Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+D+   W ++ L  EE + +       +L+V ++ LC +GK+  SKR+ VEAF  VM+  W+ H + RIE+AG N++ I F++  EK+RV S G W FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK
        +SL+IL    +A   LD++ + CAFWVQ+H +     TK+MA+ LG ++G V+EV G    DW    L +RV + + +PL+
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLK

A0A6J1DYG3 uncharacterized protein LOC1110246762.7e-3140.65Show/hide
Query:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD
        M+++   W ++ LT+EE E         +L+  ++ LC +GK+ +SKR++ +A   VM+  W+ H + RIE+AG N++ I F++  EK RV+S+G W FD
Subjt:  MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFD

Query:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEV
        +SL +L  P +A   LDV+F  CAFWVQ+H +P  + T++MA+ LG ++G V+EV
Subjt:  RSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding3.2e-0525.32Show/hide
Query:  FRSKGEKMRVMSTGSWAFDRSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRD
        F+S+     ++  G W+F+  + +++      S  D EF    FW+Q+  +P+R+ T  +   +G ++G   E    RD
Subjt:  FRSKGEKMRVMSTGSWAFDRSLVILKEPRSAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCTGGTCAGCCGGTGGAATTCTTGGAAACTGACGGATGAGGAAGCGGAGTTGGTGCGGCCGGGGGAAGGAGTTTCGGTTCTGTCGGTGGGCTCGCTAGATCT
ATGTGTGATAGGGAAAGTCTTCTCCTCAAAGCGTGTGAATGTAGAGGCTTTTCGGAAGGTTATGAGGGCAGCATGGAGAGCCCATGGGGCAATACGCATAGAATCGGCAG
GGGAGAACTTATTCGCTATTCAGTTCCGGTCCAAAGGAGAGAAGATGCGAGTGATGTCTACGGGGTCGTGGGCCTTTGACCGCTCCCTTGTGATCCTAAAGGAGCCAAGG
TCTGCAGGGTCAGTTTTGGATGTAGAGTTTAATGACTGTGCCTTCTGGGTCCAGGTCCACAATGTGCCTATGCGTTGGCAGACGAAAGAGATGGCTCAACACTTAGGGGG
CAAGATTGGAACTGTGAAGGAAGTTGGTGGGTCGCGAGACGGTGACTGGACGGGGTCGATTCTTCGGATAAGGGTTCTTTTGAGGATGGATCGACCACTCAAAGGGGTTT
CCGTTTGCAGGATGAGGAGGGTAAGGAGTTTCGCTGCCCGATTATGTATGAGCGTTTGCCAGATTTCTGTTATGTATGTGGTTGTCTGGGGCACTCGAGAAGGGAGTGTG
GGGCTGTTGTGGAAGGAGTGTCAGACCATCAGGGTGAGCAGTATGGGGACTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCTGGTCAGCCGGTGGAATTCTTGGAAACTGACGGATGAGGAAGCGGAGTTGGTGCGGCCGGGGGAAGGAGTTTCGGTTCTGTCGGTGGGCTCGCTAGATCT
ATGTGTGATAGGGAAAGTCTTCTCCTCAAAGCGTGTGAATGTAGAGGCTTTTCGGAAGGTTATGAGGGCAGCATGGAGAGCCCATGGGGCAATACGCATAGAATCGGCAG
GGGAGAACTTATTCGCTATTCAGTTCCGGTCCAAAGGAGAGAAGATGCGAGTGATGTCTACGGGGTCGTGGGCCTTTGACCGCTCCCTTGTGATCCTAAAGGAGCCAAGG
TCTGCAGGGTCAGTTTTGGATGTAGAGTTTAATGACTGTGCCTTCTGGGTCCAGGTCCACAATGTGCCTATGCGTTGGCAGACGAAAGAGATGGCTCAACACTTAGGGGG
CAAGATTGGAACTGTGAAGGAAGTTGGTGGGTCGCGAGACGGTGACTGGACGGGGTCGATTCTTCGGATAAGGGTTCTTTTGAGGATGGATCGACCACTCAAAGGGGTTT
CCGTTTGCAGGATGAGGAGGGTAAGGAGTTTCGCTGCCCGATTATGTATGAGCGTTTGCCAGATTTCTGTTATGTATGTGGTTGTCTGGGGCACTCGAGAAGGGAGTGTG
GGGCTGTTGTGGAAGGAGTGTCAGACCATCAGGGTGAGCAGTATGGGGACTGGCTGA
Protein sequenceShow/hide protein sequence
MEDLVSRWNSWKLTDEEAELVRPGEGVSVLSVGSLDLCVIGKVFSSKRVNVEAFRKVMRAAWRAHGAIRIESAGENLFAIQFRSKGEKMRVMSTGSWAFDRSLVILKEPR
SAGSVLDVEFNDCAFWVQVHNVPMRWQTKEMAQHLGGKIGTVKEVGGSRDGDWTGSILRIRVLLRMDRPLKGVSVCRMRRVRSFAARLCMSVCQISVMYVVVWGTREGSV
GLLWKECQTIRVSSMGTG