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Lag0033936 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033936
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAM110A like
Genome locationchr3:3082125..3082586
RNA-Seq ExpressionLag0033936
SyntenyLag0033936
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058153.1 hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]2.7e-5576.35Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRS A VRH++S +D KID P+ERRQFAEVAGGSAAECTA+CCCCPWT+LN++IF+IYRMPAGLCRKAINRRKRHR+MK +KYLIQQRK V+ D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS
        FTDGSVGP ++ F  H+ T+DVA+ EDL KLEEEMWGRF+QTGFWR+S
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS

KAG6587694.1 hypothetical protein SDJN03_16259, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5573.2Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        MARKVLLRS AI R  +S K EK D  R++RQFAE+AGGSAA+CT ICCCCPWT++NLVIFA+YRMP GLCRKA+NRRKRHR++K +K LIQQRK VSQ+
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE
        F D SV PA+E FEA K  +D A+GED+ KLEEEMWGRFNQTGFWRSSSQR E
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]2.9e-5776.47Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRS AI RH++  +D KID PRERRQFAEVAGGSAAECTA+CCCCPWT+LN++IFAIYRMPAGLCRKAINRRKRHR+MK +KYLIQQRK  S+D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE
        FTDGSVGP ++G+  H+  +DVA GEDL KLE+EMWGRF+QTGFWRSSSQR +
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE

TYK28512.1 hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]2.1e-5577.03Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRS A VRH++S +D KID P+ERRQFAEVAGGSAAECTA+CCCCPWT+LN+ IFAIYRMPAGLCRKAINRRKRHR+MK +KYLIQQRK V+ D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS
        FTDGSVGP ++ F  H+ T+DVA+ EDL KLEEEMWGRF+QTGFWR+S
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]1.5e-5880.52Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRSPA +RH++   DEKID P+ERRQFAEVAGGSAAECTAICCCCPWT++N+VIFA+YRMPAGLCRKA+NRRKRHRKMK KK LIQQRK VS D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVG-PAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE
        FTDGSVG P ME  EAHK  +DVA+ EDL KLEEEMWGRFNQTGFWRSSSQR E
Subjt:  FTDGSVG-PAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE

TrEMBL top hitse value%identityAlignment
A0A0A0LV48 Uncharacterized protein1.4e-5776.47Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRS AI RH++  +D KID PRERRQFAEVAGGSAAECTA+CCCCPWT+LN++IFAIYRMPAGLCRKAINRRKRHR+MK +KYLIQQRK  S+D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE
        FTDGSVGP ++G+  H+  +DVA GEDL KLE+EMWGRF+QTGFWRSSSQR +
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE

A0A5A7UQK6 Uncharacterized protein1.3e-5576.35Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRS A VRH++S +D KID P+ERRQFAEVAGGSAAECTA+CCCCPWT+LN++IF+IYRMPAGLCRKAINRRKRHR+MK +KYLIQQRK V+ D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS
        FTDGSVGP ++ F  H+ T+DVA+ EDL KLEEEMWGRF+QTGFWR+S
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS

A0A5D3DY75 Uncharacterized protein1.0e-5577.03Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M RKVLLRS A VRH++S +D KID P+ERRQFAEVAGGSAAECTA+CCCCPWT+LN+ IFAIYRMPAGLCRKAINRRKRHR+MK +KYLIQQRK V+ D
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS
        FTDGSVGP ++ F  H+ T+DVA+ EDL KLEEEMWGRF+QTGFWR+S
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSS

A0A6J1BZB0 uncharacterized protein LOC1110069726.5e-4766.88Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        M  KVLLRSPAI  +++S KDEK+D PRERRQFAEVAGGSAAECTAICCCCP T++N+VIFAIY+MPAGLCRKA+  RKRH KMK KK LIQQR+  SQ+
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGP-AMEGFEAHKMTDDVANGE-------DLMKLEEEMWGRFNQTGFWRSSSQRQ
        FTDGS GP  + GF+  ++   V   E       DL+ LEEEMWG+F+QTGFWRSSSQ Q
Subjt:  FTDGSVGP-AMEGFEAHKMTDDVANGE-------DLMKLEEEMWGRFNQTGFWRSSSQRQ

A0A6J1F6E1 uncharacterized protein LOC1114412343.8e-5572.55Show/hide
Query:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD
        MARKVLLRS AI R  +S K EK D  R++RQFAE+AGGSAA+CT ICCCCPWT++NLVIFA+YRMP GLCRKA+NRRKRHR++K +K LIQQRK  SQ+
Subjt:  MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQD

Query:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE
        F D SV PA+E FEA K  +D A+GED+ KLEEEMWGRFNQTGFWRSSSQR E
Subjt:  FTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein8.7e-2036.65Show/hide
Query:  MARKVLLRSPAIVRHQAS----PKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKN
        M R V+L+SP +V  + S             +ERR+  EVAGG+AAEC A+ CCCP  ++NL++ A+Y++PA +C+KA  R KR R  + +  L+    +
Subjt:  MARKVLLRSPAIVRHQAS----PKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKN

Query:  VSQDFTDGSVGPAM--EGFEAHKMTDD--VANGE--DLMKLEEEMWGRFNQTGFWRSSSQR
         + + ++ +V   +  E   A  + ++  V+ GE  D+++LE EM  RF   GFWRS SQ+
Subjt:  VSQDFTDGSVGPAM--EGFEAHKMTDD--VANGE--DLMKLEEEMWGRFNQTGFWRSSSQR

AT3G11690.1 unknown protein2.6e-1634.27Show/hide
Query:  RSPAIVRHQASPKDEKI---DTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKN----------KKYLIQQ-
        R P + R  +SP         TP      AE  GG+ A C A+ CCCP  L+NL++ AIY++P G+CR+AI  R+R + +KN          K   +Q+ 
Subjt:  RSPAIVRHQASPKDEKI---DTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKN----------KKYLIQQ-

Query:  ------------RKNVSQDFTDGS------VGPAM-EGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQ
                      +VS D  D +      +G ++  GF   + TD+  + E ++ LE+EMW RF   GFWRS SQR+
Subjt:  ------------RKNVSQDFTDGS------VGPAM-EGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQ

AT5G06380.1 unknown protein1.3e-1537.82Show/hide
Query:  AEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQDFTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEE
        AE  GG+ A C A+C C P +++NLV+ A+Y++P GLCR+AI RR R +++  K+++   R+      +  +V P     E  +  ++    E ++ LE+
Subjt:  AEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQDFTDGSVGPAMEGFEAHKMTDDVANGEDLMKLEE

Query:  EMWGRFNQTGFWRSSSQRQ
        EMW RF   GFWRS SQ +
Subjt:  EMWGRFNQTGFWRSSSQRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATCGTCCGTCACCAAGCGTCGCCTAAAGACGAGAAAATCGACACGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGC
CGGCGGTTCGGCGGCGGAATGCACGGCGATTTGCTGTTGCTGTCCATGGACGCTGTTGAACCTCGTGATCTTTGCCATCTACCGGATGCCGGCGGGGCTCTGCCGGAAGG
CGATAAACAGGAGAAAACGACACCGTAAAATGAAGAACAAGAAGTATCTCATCCAGCAACGGAAGAACGTCTCTCAGGATTTCACAGATGGATCGGTGGGGCCCGCAATG
GAAGGTTTTGAGGCCCACAAGATGACCGATGACGTGGCAAATGGCGAAGATTTGATGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGGAG
TTCTTCTCAAAGACAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATCGTCCGTCACCAAGCGTCGCCTAAAGACGAGAAAATCGACACGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGC
CGGCGGTTCGGCGGCGGAATGCACGGCGATTTGCTGTTGCTGTCCATGGACGCTGTTGAACCTCGTGATCTTTGCCATCTACCGGATGCCGGCGGGGCTCTGCCGGAAGG
CGATAAACAGGAGAAAACGACACCGTAAAATGAAGAACAAGAAGTATCTCATCCAGCAACGGAAGAACGTCTCTCAGGATTTCACAGATGGATCGGTGGGGCCCGCAATG
GAAGGTTTTGAGGCCCACAAGATGACCGATGACGTGGCAAATGGCGAAGATTTGATGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGGAG
TTCTTCTCAAAGACAGGAGTAA
Protein sequenceShow/hide protein sequence
MARKVLLRSPAIVRHQASPKDEKIDTPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQDFTDGSVGPAM
EGFEAHKMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRQE