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Lag0033979 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0033979
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPsbP domain-containing protein
Genome locationchr3:3437174..3439314
RNA-Seq ExpressionLag0033979
SyntenyLag0033979
Gene Ontology termsGO:0048564 - photosystem I assembly (biological process)
GO:0009543 - chloroplast thylakoid lumen (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139523.1 psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus]5.4e-0981.4Show/hide
Query:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ
        AMAL+LSTCIFSN+ALA  SVGLLEY DTFDGYS K PKNW Q
Subjt:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ

XP_008464319.1 PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo]8.4e-1083.72Show/hide
Query:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ
        AMALILSTCIFSN+A A PSVGLLEY DTFDGYS K PKNW Q
Subjt:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ

XP_016903181.1 PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X2 [Cucumis melo]8.4e-1083.72Show/hide
Query:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ
        AMALILSTCIFSN+A A PSVGLLEY DTFDGYS K PKNW Q
Subjt:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ

XP_022961486.1 psbP domain-containing protein 1, chloroplastic [Cucurbita moschata]5.4e-0936.84Show/hide
Query:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA
        HT++ S  +W  TA         D   K    + ++S            AMALILS+CIFSN+ALAE SVGLLEY DTFDGYS   PKNW Q   +R   
Subjt:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA

Query:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI
          +  +    ++ +  ++  + S++R    ED+
Subjt:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI

XP_022968780.1 psbP domain-containing protein 1, chloroplastic [Cucurbita maxima]5.4e-0936.09Show/hide
Query:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA
        HT++ S  +W  TA         D   K    + ++S            AMALILS+CIFSN+A+AE SVGLLEY DTFDGYS   PKNW Q   +R   
Subjt:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA

Query:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI
          +  +    ++ +  ++  + S++R    ED+
Subjt:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI

TrEMBL top hitse value%identityAlignment
A0A1S3CLM8 psbP domain-containing protein 1, chloroplastic isoform X14.1e-1083.72Show/hide
Query:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ
        AMALILSTCIFSN+A A PSVGLLEY DTFDGYS K PKNW Q
Subjt:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ

A0A1S4E4M1 psbP domain-containing protein 1, chloroplastic isoform X24.1e-1083.72Show/hide
Query:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ
        AMALILSTCIFSN+A A PSVGLLEY DTFDGYS K PKNW Q
Subjt:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ

A0A5D3E4R5 PsbP domain-containing protein 14.1e-1083.72Show/hide
Query:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ
        AMALILSTCIFSN+A A PSVGLLEY DTFDGYS K PKNW Q
Subjt:  AMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQ

A0A6J1HAH2 psbP domain-containing protein 1, chloroplastic2.6e-0936.84Show/hide
Query:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA
        HT++ S  +W  TA         D   K    + ++S            AMALILS+CIFSN+ALAE SVGLLEY DTFDGYS   PKNW Q   +R   
Subjt:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA

Query:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI
          +  +    ++ +  ++  + S++R    ED+
Subjt:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI

A0A6J1HY63 psbP domain-containing protein 1, chloroplastic2.6e-0936.09Show/hide
Query:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA
        HT++ S  +W  TA         D   K    + ++S            AMALILS+CIFSN+A+AE SVGLLEY DTFDGYS   PKNW Q   +R   
Subjt:  HTVADSDERWSSTA---------DDLKKKNEEVENKSS--------EEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVA

Query:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI
          +  +    ++ +  ++  + S++R    ED+
Subjt:  TSLLLKVGVRINVDTRLQIRNTSTNRGAPQEDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAGAGAGAATAAGTGGAGGAAAGAAGAATAAGAAAGGAGGAAAAAAACACACAGTCGCCGACAGCGACGAGCGGTGGTCGTCGACCGCTGACGATTTGAAGAA
GAAGAATGAAGAGGTTGAGAATAAGAGTTCCGAGGAGGAAGCAATGGCATTGATCTTGTCGACTTGTATTTTCTCCAATGCTGCATTGGCTGAGCCATCTGTTGGATTAT
TGGAATACAATGACACTTTTGATGGCTATTCGTTAAAGTCCCCTAAGAATTGGAATCAAGGTTTGGCCATGAGAACAGTGGCAACTTCTCTACTGCTAAAAGTTGGAGTG
AGGATCAACGTTGATACTCGATTGCAAATACGAAATACCTCCACTAATCGTGGAGCTCCACAGGAGGATATCGTTAGAACTATTCGACTGGCTTTTCCAGCAAGGCTATC
GTTTGCCCGTCCTTTGCTTCAATCTCAGTCTATTCCATTCGAGCCTTCAGTTTTCATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAAGAGAGAATAAGTGGAGGAAAGAAGAATAAGAAAGGAGGAAAAAAACACACAGTCGCCGACAGCGACGAGCGGTGGTCGTCGACCGCTGACGATTTGAAGAA
GAAGAATGAAGAGGTTGAGAATAAGAGTTCCGAGGAGGAAGCAATGGCATTGATCTTGTCGACTTGTATTTTCTCCAATGCTGCATTGGCTGAGCCATCTGTTGGATTAT
TGGAATACAATGACACTTTTGATGGCTATTCGTTAAAGTCCCCTAAGAATTGGAATCAAGGTTTGGCCATGAGAACAGTGGCAACTTCTCTACTGCTAAAAGTTGGAGTG
AGGATCAACGTTGATACTCGATTGCAAATACGAAATACCTCCACTAATCGTGGAGCTCCACAGGAGGATATCGTTAGAACTATTCGACTGGCTTTTCCAGCAAGGCTATC
GTTTGCCCGTCCTTTGCTTCAATCTCAGTCTATTCCATTCGAGCCTTCAGTTTTCATGGTTTAG
Protein sequenceShow/hide protein sequence
MREERISGGKKNKKGGKKHTVADSDERWSSTADDLKKKNEEVENKSSEEEAMALILSTCIFSNAALAEPSVGLLEYNDTFDGYSLKSPKNWNQGLAMRTVATSLLLKVGV
RINVDTRLQIRNTSTNRGAPQEDIVRTIRLAFPARLSFARPLLQSQSIPFEPSVFMV