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Lag0034052 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034052
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationchr3:4005028..4008760
RNA-Seq ExpressionLag0034052
SyntenyLag0034052
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]7.1e-3076.67Show/hide
Query:  SCCD-ADTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF
        SCCD ADTGPGPY V PP  DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL+LLLGMEGP + H+A AL+V LTQVIF
Subjt:  SCCD-ADTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]1.1e-1782.46Show/hide
Query:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGPY VAPPM DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL
Subjt:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2474.7Show/hide
Query:  MSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP
        M DPMQHGQSQPY  I+PPQ ETKFQ V PPRET S+GDGFCRGL        +LLLGME PCK HFAPALLV LTQVIFWVP
Subjt:  MSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3277.89Show/hide
Query:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP
        DTGPGPYPVAPPM DPMQHGQSQPY  I+PPQ ETKFQ V PPRET S+GDGFCRGL        +LLLGME PCK HFAPALLV LTQVIFWVP
Subjt:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]1.8e-1782.46Show/hide
Query:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGPYPVAPPM DPMQHGQSQPY  I+PPQ ETK Q V PPRET S+GDGFCRGL
Subjt:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein5.1e-1882.46Show/hide
Query:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGPY VAPPM DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL
Subjt:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

A0A5A7UV38 Uncharacterized protein3.4e-3076.67Show/hide
Query:  SCCD-ADTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF
        SCCD ADTGPGPY V PP  DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL+LLLGMEGP + H+A AL+V LTQVIF
Subjt:  SCCD-ADTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like8.8e-1882.46Show/hide
Query:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGPYPVAPPM DPMQHGQSQPY  I+PPQ ETK Q V PPRET S+GDGFCRGL
Subjt:  DTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGAAATCCTTCTTATTGCAAAAGGTATACATGCTAAAGTTTCTTGAATTTGAAAGGACATGGGGTTGGTTCATTTGGTCATTGGGTTTCTTAAGAGAAGATGG
CGATCATCTTAACTCTTCTCTGCATTCTGTCATAATTAGAAAAGGTTCAGGTTCATGGGATGACTCATACATTGCCTTTTTGCAGCTGGGGTTTCAACAAGTTGAGGAGA
AATTCGGGATTTCCCCTCAAGACGTGTTGATGTTCGCATCGCTCCTCCGTTTGACTTCAAATATATTCTCCTTGAGGCAGTTGGGCAGTATTAAGAATGTATCTTGTTGT
TATGCAGTTGGAGTTATAATTTTGGTGCTGTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTACCCAGTTGCCCCACCTATGAGTGATCCAATGCAACATGGTCAGTC
TCAGCCATACCCTCCAATTGTACCTCCTCAAGTGGAAACCAAGTTTCAAACTGTACCTCCTCCAAGGGAAACCAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTACATC
TGCTTCTAGGGATGGAGGGTCCTTGCAAAGGTCACTTTGCCCCTGCACTTCTAGTTTGTCTGACACAAGTTATCTTCTGGGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGAAATCCTTCTTATTGCAAAAGGTATACATGCTAAAGTTTCTTGAATTTGAAAGGACATGGGGTTGGTTCATTTGGTCATTGGGTTTCTTAAGAGAAGATGG
CGATCATCTTAACTCTTCTCTGCATTCTGTCATAATTAGAAAAGGTTCAGGTTCATGGGATGACTCATACATTGCCTTTTTGCAGCTGGGGTTTCAACAAGTTGAGGAGA
AATTCGGGATTTCCCCTCAAGACGTGTTGATGTTCGCATCGCTCCTCCGTTTGACTTCAAATATATTCTCCTTGAGGCAGTTGGGCAGTATTAAGAATGTATCTTGTTGT
TATGCAGTTGGAGTTATAATTTTGGTGCTGTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTACCCAGTTGCCCCACCTATGAGTGATCCAATGCAACATGGTCAGTC
TCAGCCATACCCTCCAATTGTACCTCCTCAAGTGGAAACCAAGTTTCAAACTGTACCTCCTCCAAGGGAAACCAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTACATC
TGCTTCTAGGGATGGAGGGTCCTTGCAAAGGTCACTTTGCCCCTGCACTTCTAGTTTGTCTGACACAAGTTATCTTCTGGGTTCCATGA
Protein sequenceShow/hide protein sequence
MKGKSFLLQKVYMLKFLEFERTWGWFIWSLGFLREDGDHLNSSLHSVIIRKGSGSWDDSYIAFLQLGFQQVEEKFGISPQDVLMFASLLRLTSNIFSLRQLGSIKNVSCC
YAVGVIILVLSCCDADTGPGPYPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIFWVP