; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034135 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034135
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionphotosynthetic NDH subunit of subcomplex B 4, chloroplastic
Genome locationchr3:4724327..4725337
RNA-Seq ExpressionLag0034135
SyntenyLag0034135
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR034570 - Photosynthetic NDH subunit of subcomplex B 4, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138173.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis sativus]1.4e-8490.5Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFSIIKPTLHSS LHP KS  IPHSKLLSNSG FSH++LP+  KP+RG SL KVNAFPDWQLMAVLVDH+DGQRDL+THKSIVHLSD AIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAGKK
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

XP_008453213.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis melo]2.9e-8591.06Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFSIIKPTLHSS LHP KS  IPHSKLLSNSG FSH++LP+  KP+RG SL KVNAFPDWQLMAVLVDH+DGQRDL+THKSIVHLSDEAIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAGKK
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

XP_022933404.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucurbita moschata]7.7e-8691.67Show/hide
Query:  MAKAIAGFSIIKPTLHSSL-LHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNV
        MAKAIAGFSIIK TL+SS  LHPHKSTHIP S LL NSGVFSHRQL EG+K QRG SLG+VNAFPDW LMAVLVDH+DGQRDL+THKSIVHLSDEAIKNV
Subjt:  MAKAIAGFSIIKPTLHSSL-LHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNV

Query:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

XP_023516363.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-8589.39Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFS+I PTLHSS LHPHKST IPH KL SNSG+F H+QL E TK QRG S+GKV+AFPDWQLMAVLVDH+DGQRDL+THKSIVHLSDEAIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAG+K
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

XP_038880039.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Benincasa hispida]6.5e-8589.39Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFSIIKPTLHSS LH HKST IP SKLLSNS  F+H++ PE TKP+RG SLGK+NAFPDWQLMAVLVDH+DGQRDL+THKSIVHLSDEAIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQ+VGGL+ELEEAGKK
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRP8 Uncharacterized protein7.0e-8590.5Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFSIIKPTLHSS LHP KS  IPHSKLLSNSG FSH++LP+  KP+RG SL KVNAFPDWQLMAVLVDH+DGQRDL+THKSIVHLSD AIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAGKK
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

A0A1S3BVN6 photosynthetic NDH subunit of subcomplex B 4, chloroplastic1.4e-8591.06Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFSIIKPTLHSS LHP KS  IPHSKLLSNSG FSH++LP+  KP+RG SL KVNAFPDWQLMAVLVDH+DGQRDL+THKSIVHLSDEAIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAGKK
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

A0A5A7UWT7 Photosynthetic NDH subunit of subcomplex B 41.4e-8591.06Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFSIIKPTLHSS LHP KS  IPHSKLLSNSG FSH++LP+  KP+RG SL KVNAFPDWQLMAVLVDH+DGQRDL+THKSIVHLSDEAIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAGKK
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

A0A6J1EZP2 photosynthetic NDH subunit of subcomplex B 4, chloroplastic3.7e-8691.67Show/hide
Query:  MAKAIAGFSIIKPTLHSSL-LHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNV
        MAKAIAGFSIIK TL+SS  LHPHKSTHIP S LL NSGVFSHRQL EG+K QRG SLG+VNAFPDW LMAVLVDH+DGQRDL+THKSIVHLSDEAIKNV
Subjt:  MAKAIAGFSIIKPTLHSSL-LHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNV

Query:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
Subjt:  YSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

A0A6J1JG67 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like2.0e-8488.27Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MAKAIAGFS+I PTLHSS LHPHK+T IP  KL SNSG+F H+QL E TK QRG S+GKV+AFPDWQLMAVLVDH+DGQRDL+THKSIVHLSDEAIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQKVGGLRELEEAG+K
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

SwissProt top hitse value%identityAlignment
Q8RXS1 Photosynthetic NDH subunit of subcomplex B 4, chloroplastic5.6e-4757.54Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MA+A   F+     + SS  H  K    P+     +  V   R+        RGS   +     D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
          YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARAELWREELIEEIEQKVGGLRELEEA  K
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

Arabidopsis top hitse value%identityAlignment
AT1G18730.1 NDH dependent flow 64.0e-4857.54Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY
        MA+A   F+     + SS  H  K    P+     +  V   R+        RGS   +     D  LMAV+V  ++G RD+IT K + HLSD+AIKNVY
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVY

Query:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
          YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARAELWREELIEEIEQKVGGLRELEEA  K
Subjt:  SLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

AT1G18730.2 NDH dependent flow 65.2e-3252.45Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIP-HSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFP-DWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKN
        MA+A   F+     + SS  H  K    P H   LSN      R L  G       SL    A P D  LMAV+V  ++G RD+IT K + HLSD+AIKN
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIP-HSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFP-DWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKN

Query:  VYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        VY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  VYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE

AT1G18730.3 NDH dependent flow 62.8e-4960.22Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIP-HSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFP-DWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKN
        MA+A   F+     + SS  H  K    P H   LSN      R L  G       SL    A P D  LMAV+V  ++G RD+IT K + HLSD+AIKN
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIP-HSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFP-DWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKN

Query:  VYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK
        VY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARAELWREELIEEIEQKVGGLRELEEA  K
Subjt:  VYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK

AT1G18730.4 NDH dependent flow 65.2e-3252.45Show/hide
Query:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIP-HSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFP-DWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKN
        MA+A   F+     + SS  H  K    P H   LSN      R L  G       SL    A P D  LMAV+V  ++G RD+IT K + HLSD+AIKN
Subjt:  MAKAIAGFSIIKPTLHSSLLHPHKSTHIP-HSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFP-DWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKN

Query:  VYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        VY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  VYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGGCTATCGCAGGCTTCAGCATCATCAAACCAACTCTGCATAGCTCATTACTCCATCCACACAAATCAACCCACATCCCACATTCCAAACTGCTCTCAAACTC
TGGAGTTTTCAGCCATCGACAACTGCCTGAAGGTACAAAGCCCCAGAGAGGCTCTTCTCTGGGCAAAGTGAATGCTTTTCCAGATTGGCAATTGATGGCGGTTCTAGTCG
ATCACATGGACGGCCAAAGGGACCTTATTACCCACAAATCCATTGTGCATCTTAGTGATGAAGCTATCAAGAATGTCTACAGTCTTTACATCATGTTCACTTGTTGGGGA
TGTTTGTTCTTTGGCTCCATGAAGGATCCATATTATGATTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGGCATTGGGTCTACGAGAAGCAAGAGGACATTGA
AGAAGCAGCGAGAGCAGAGCTATGGCGGGAGGAGCTTATTGAGGAGATTGAGCAGAAGGTTGGAGGACTTCGAGAGTTGGAAGAAGCAGGCAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGGCTATCGCAGGCTTCAGCATCATCAAACCAACTCTGCATAGCTCATTACTCCATCCACACAAATCAACCCACATCCCACATTCCAAACTGCTCTCAAACTC
TGGAGTTTTCAGCCATCGACAACTGCCTGAAGGTACAAAGCCCCAGAGAGGCTCTTCTCTGGGCAAAGTGAATGCTTTTCCAGATTGGCAATTGATGGCGGTTCTAGTCG
ATCACATGGACGGCCAAAGGGACCTTATTACCCACAAATCCATTGTGCATCTTAGTGATGAAGCTATCAAGAATGTCTACAGTCTTTACATCATGTTCACTTGTTGGGGA
TGTTTGTTCTTTGGCTCCATGAAGGATCCATATTATGATTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGGCATTGGGTCTACGAGAAGCAAGAGGACATTGA
AGAAGCAGCGAGAGCAGAGCTATGGCGGGAGGAGCTTATTGAGGAGATTGAGCAGAAGGTTGGAGGACTTCGAGAGTTGGAAGAAGCAGGCAAGAAATAA
Protein sequenceShow/hide protein sequence
MAKAIAGFSIIKPTLHSSLLHPHKSTHIPHSKLLSNSGVFSHRQLPEGTKPQRGSSLGKVNAFPDWQLMAVLVDHMDGQRDLITHKSIVHLSDEAIKNVYSLYIMFTCWG
CLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARAELWREELIEEIEQKVGGLRELEEAGKK