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Lag0034178 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034178
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionR2r3-myb transcription factor, putative
Genome locationchr3:5061397..5061744
RNA-Seq ExpressionLag0034178
SyntenyLag0034178
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057914.1 transcription factor MYB35-like [Cucumis melo var. makuwa]3.4e-3389.02Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIPSCDKLNLKRDLWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KH NFTSQEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

XP_008453162.1 PREDICTED: transcription factor MYB35-like [Cucumis melo]3.4e-3389.02Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIPSCDKLNLKRDLWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KH NFTSQEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

XP_011660334.2 transcription factor MYB35 [Cucumis sativus]3.4e-3389.02Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIPSCDKLNLKRDLWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KH NFTSQEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

XP_022135353.1 transcription factor MYB35-like [Momordica charantia]1.7e-3285.37Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R+PSCDKLNLKR LWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KHHNFT QEEELI+RLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

XP_022988389.1 transcription factor MYB35-like [Cucurbita maxima]3.8e-3286.59Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIP CDKLNLKR LWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KHHNFT QEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

TrEMBL top hitse value%identityAlignment
A0A0A0LP09 Uncharacterized protein1.7e-3389.02Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIPSCDKLNLKRDLWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KH NFTSQEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

A0A1S3BWP9 transcription factor MYB35-like1.7e-3389.02Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIPSCDKLNLKRDLWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KH NFTSQEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

A0A5D3BFR7 Transcription factor MYB35-like1.7e-3389.02Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIPSCDKLNLKRDLWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KH NFTSQEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

A0A6J1C4K6 transcription factor MYB35-like8.2e-3385.37Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R+PSCDKLNLKR LWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KHHNFT QEEELI+RLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

A0A6J1JLE4 transcription factor MYB35-like1.8e-3286.59Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIP CDKLNLKR LWTAEEDA+ILAYV KHGTSNWTS PKKAGLRR GKSCRLRWT  LRPD KHHNFT QEEELIIRLH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

SwissProt top hitse value%identityAlignment
Q7XQN1 Transcription factor MYB801.3e-2258.54Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R+P C+K N+KR  WT EED ++L+Y+ ++GT NW   PK AGL+R GKSCRLRWT  LRPD KH  FT  EE+ II+LH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

Q9LE63 Transcription factor MYB1066.3e-2259.76Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R P CDK  LK+  WT EED ++LAY+ +HG  +W S P+KAGL+R GKSCRLRWT  LRPD K   FT QEE+ II+LH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

Q9LSI7 Transcription factor MYB351.6e-2567.07Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R P CDK N+K+ LWT EEDA+ILAYV  HG  NW+  PKKAGL R GKSCRLRWT  LRPD KH +F++QEEELII  H
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

Q9LXF1 Transcription factor MYB168.2e-2259.76Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R P CDKL LK+  WT EED ++LAY+ +HG  +W S P+KAGL R GKSCRLRWT  LRPD K   F  QEE+ II+LH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

Q9XHV0 Transcription factor MYB804.8e-2256.1Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIP C+K N+KR  WT EED ++ +Y+ +HGT NW   PK AGL+R GKSCRLRWT  LRPD KH  F+  EE +I++ H
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

Arabidopsis top hitse value%identityAlignment
AT3G28470.1 Duplicated homeodomain-like superfamily protein1.1e-2667.07Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R P CDK N+K+ LWT EEDA+ILAYV  HG  NW+  PKKAGL R GKSCRLRWT  LRPD KH +F++QEEELII  H
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

AT4G21440.1 MYB-like 1022.9e-2257.32Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        MAR P C+K  LK+  WT+EED +++ Y+ KHG  NW + PK AGL+R GKSCRLRWT  LRPD K   F+ +EEE II+LH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

AT5G15310.1 myb domain protein 165.8e-2359.76Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R P CDKL LK+  WT EED ++LAY+ +HG  +W S P+KAGL R GKSCRLRWT  LRPD K   F  QEE+ II+LH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

AT5G15310.2 myb domain protein 165.8e-2359.76Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M R P CDKL LK+  WT EED ++LAY+ +HG  +W S P+KAGL R GKSCRLRWT  LRPD K   F  QEE+ II+LH
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH

AT5G56110.1 myb domain protein 1033.4e-2356.1Show/hide
Query:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH
        M RIP C+K N+KR  WT EED ++ +Y+ +HGT NW   PK AGL+R GKSCRLRWT  LRPD KH  F+  EE +I++ H
Subjt:  MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWT--LRPDFKHHNFTSQEEELIIRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAATTCCTTCCTGTGACAAGTTGAACCTCAAAAGGGACCTTTGGACTGCAGAGGAAGATGCAAGAATACTTGCATACGTATTGAAGCACGGGACGAGCAACTG
GACCTCAACTCCAAAGAAAGCAGGACTAAGGAGACGTGGAAAGAGCTGCAGACTTAGATGGACCTTGAGGCCAGATTTTAAGCATCATAACTTCACATCCCAAGAGGAGG
AATTGATTATCAGGCTTCATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGAATTCCTTCCTGTGACAAGTTGAACCTCAAAAGGGACCTTTGGACTGCAGAGGAAGATGCAAGAATACTTGCATACGTATTGAAGCACGGGACGAGCAACTG
GACCTCAACTCCAAAGAAAGCAGGACTAAGGAGACGTGGAAAGAGCTGCAGACTTAGATGGACCTTGAGGCCAGATTTTAAGCATCATAACTTCACATCCCAAGAGGAGG
AATTGATTATCAGGCTTCATGAATGA
Protein sequenceShow/hide protein sequence
MARIPSCDKLNLKRDLWTAEEDARILAYVLKHGTSNWTSTPKKAGLRRRGKSCRLRWTLRPDFKHHNFTSQEEELIIRLHE