; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034212 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034212
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description39S ribosomal protein L47, mitochondrial
Genome locationchr3:5307393..5308290
RNA-Seq ExpressionLag0034212
SyntenyLag0034212
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR010729 - Ribosomal protein L47, mitochondrial
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR038340 - MRP-L47 superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KDO69747.1 hypothetical protein CISIN_1g032302mg [Citrus sinensis]2.0e-4082.08Show/hide
Query:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
        L+    + +GP   +  + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQ+QML+AQNL+FPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
Subjt:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK

Query:  RMINAL
        RMINAL
Subjt:  RMINAL

XP_006476735.1 39S ribosomal protein L47, mitochondrial [Citrus sinensis]9.1e-4182.08Show/hide
Query:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
        L+    + +GP   +  + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQML+AQNL+FPNPER+PKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
Subjt:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK

Query:  RMINAL
        RMINAL
Subjt:  RMINAL

XP_022988417.1 39S ribosomal protein L47, mitochondrial [Cucurbita maxima]7.7e-4095.51Show/hide
Query:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL
        + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRSAEMKRM+NAL
Subjt:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL

XP_023530690.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo]7.7e-4095.51Show/hide
Query:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL
        + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRSAEMKRM+NAL
Subjt:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL

XP_038879389.1 39S ribosomal protein L47, mitochondrial [Benincasa hispida]5.9e-4096.63Show/hide
Query:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL
        + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRSAEMKRMINAL
Subjt:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL

TrEMBL top hitse value%identityAlignment
A0A067G241 Uncharacterized protein9.8e-4182.08Show/hide
Query:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
        L+    + +GP   +  + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQ+QML+AQNL+FPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
Subjt:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK

Query:  RMINAL
        RMINAL
Subjt:  RMINAL

A0A2H5NFE5 Uncharacterized protein4.9e-4081.13Show/hide
Query:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
        L+      +GP   +  + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQ+QML+AQNL+FP+PERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
Subjt:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK

Query:  RMINAL
        RMINAL
Subjt:  RMINAL

A0A6A2Y4Y6 Protein kinase6.4e-4081.13Show/hide
Query:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK
        L+    + + P   +  + RSWKASELRLKSWDDL+KLWYVLLKEKNMLMTQRQML AQNLRFPNPERIPKVRKSMCRIKQVLTERAIE+PDPRRSAEMK
Subjt:  LDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMK

Query:  RMINAL
        RMINAL
Subjt:  RMINAL

A0A6J1E238 39S ribosomal protein L47, mitochondrial3.7e-4095.51Show/hide
Query:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL
        + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRSAEMKRM+NAL
Subjt:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL

A0A6J1JCZ2 39S ribosomal protein L47, mitochondrial3.7e-4095.51Show/hide
Query:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL
        + RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRSAEMKRM+NAL
Subjt:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL

SwissProt top hitse value%identityAlignment
P87232 54S ribosomal protein L4, mitochondrial1.5e-0948.72Show/hide
Query:  PGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFP--NPERIPKVRKSMCRIKQVLTER
        P S E  F R+W A ELR KS++DL+ LWY  L+EKN+L TQR  +    L  P  + ER+  V K+M  IK VL ER
Subjt:  PGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFP--NPERIPKVRKSMCRIKQVLTER

Q08DT6 39S ribosomal protein L47, mitochondrial1.3e-1053.03Show/hide
Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER
        SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  + +V+ ER
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER

Q2H080 54S ribosomal protein L4, mitochondrial1.6e-0846.34Show/hide
Query:  RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNP---ERIPKVRKSMCRIKQVLTERAIEEPDPRRSAE
        RSW A ELR KSWDDL++LW+V  KE+N + T     N   L F      ER   VR++M  IK VLTER     D  + AE
Subjt:  RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNP---ERIPKVRKSMCRIKQVLTERAIEEPDPRRSAE

Q8K2Y7 39S ribosomal protein L47, mitochondrial7.8e-1153.03Show/hide
Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER
        SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  + +V+ ER
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER

Q9HD33 39S ribosomal protein L47, mitochondrial3.0e-1051.52Show/hide
Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER
        +W   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  + +V+ ER
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER

Arabidopsis top hitse value%identityAlignment
AT1G07830.1 ribosomal protein L29 family protein4.1e-3985.39Show/hide
Query:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL
        + R WKASELRLKSWDDL KLWYVLLKEKNMLMTQRQML AQN++FPNPERIPKVR+SMCRIK VLTERAIEEPD RRSAEMKRM+N +
Subjt:  FSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTAAAGAATGTAATGGAAATTTCATGAGATTTGGAAGGTTCTCCCTCTTGATTATTCTGGATGCTTTGCTTGCAAGTAGAAAAGGCCCTGGCAGCTTGGAATT
TTTCTTCAGTCGGAGTTGGAAGGCTTCAGAACTGCGGCTTAAGTCTTGGGACGATCTCAATAAGCTATGGTATGTCCTGTTGAAGGAGAAAAATATGTTGATGACACAGC
GCCAGATGCTTAATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCATTCCCAAGGTGAGGAAGTCAATGTGTCGAATCAAGCAAGTACTCACCGAGAGAGCCATCGAA
GAACCAGATCCTCGGAGATCTGCAGAGATGAAGAGGATGATAAATGCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTAAAGAATGTAATGGAAATTTCATGAGATTTGGAAGGTTCTCCCTCTTGATTATTCTGGATGCTTTGCTTGCAAGTAGAAAAGGCCCTGGCAGCTTGGAATT
TTTCTTCAGTCGGAGTTGGAAGGCTTCAGAACTGCGGCTTAAGTCTTGGGACGATCTCAATAAGCTATGGTATGTCCTGTTGAAGGAGAAAAATATGTTGATGACACAGC
GCCAGATGCTTAATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCATTCCCAAGGTGAGGAAGTCAATGTGTCGAATCAAGCAAGTACTCACCGAGAGAGCCATCGAA
GAACCAGATCCTCGGAGATCTGCAGAGATGAAGAGGATGATAAATGCTCTGTGA
Protein sequenceShow/hide protein sequence
MSLKECNGNFMRFGRFSLLIILDALLASRKGPGSLEFFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIE
EPDPRRSAEMKRMINAL