; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034216 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034216
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHIG1 domain-containing protein
Genome locationchr3:5326759..5328239
RNA-Seq ExpressionLag0034216
SyntenyLag0034216
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO78412.1 hypothetical protein COLO4_24770 [Corchorus olitorius]6.1e-3083.75Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP L+EL +GK+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

OMO81563.1 hypothetical protein CCACVL1_12363 [Corchorus capsularis]1.2e-3085Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EPNL+EL +GK+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

XP_021592376.1 RING-H2 finger protein ATL48-like [Manihot esculenta]1.2e-3081.71Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS
        M  TEPNL++ F+ K+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW++S
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS

XP_022727172.1 RING-H2 finger protein ATL48-like [Durio zibethinus]4.7e-3085Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP+L+EL + K+RVRNPLVP+GALITAGVLTAGLISFRQGNS LGQMLMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

XP_042948360.1 RING-H2 finger protein ATL48-like [Carya illinoinensis]4.7e-3082.5Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M  TEPNL++ F+ K+RVRNPLVPIGAL+TAGVLTAGLISF+QGNSHLGQMLMR RVV QGATVALMVGTAYYYG+NPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

TrEMBL top hitse value%identityAlignment
A0A1R3I733 HIG1 domain-containing protein3.0e-3083.75Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP L+EL +GK+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

A0A1R3IG67 HIG1 domain-containing protein6.0e-3185Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EPNL+EL +GK+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

A0A2C9UJH6 HIG1 domain-containing protein6.0e-3181.71Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS
        M  TEPNL++ F+ K+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW++S
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS

A0A2P2KAW7 HIG1 domain-containing protein2.3e-3080.49Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS
        M A EPNL++LF+ K+RVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTA+YYG+NPW++S
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS

A0A6P5XHD4 RING-H2 finger protein ATL48-like2.3e-3085Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP+L+EL + K+RVRNPLVP+GALITAGVLTAGLISFRQGNS LGQMLMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

SwissProt top hitse value%identityAlignment
Q4VC39 Putative HIG1 domain family member 2B2.9e-0649.06Show/hide
Query:  NPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA
        NP+VPIG L TA VLT GL  F QGNS   +++M  ++  QG T+ A+++G A
Subjt:  NPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA

Q6CBQ8 Respiratory supercomplex factor 1, mitochondrial4.4e-0740.3Show/hide
Query:  KRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR
        +R    PLVP+G L T G L     + R GN      +   RV  QG TVA ++G A YYG++P Q+
Subjt:  KRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR

Q7X843 RING-H2 finger protein ATL481.3e-3075.31Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR
        M + EP++++LF  K+RVRNPLVP+GAL+TAGVLTAGLISFR+GNS LGQ+LMR RVVVQGATVALMVGT YYYG+NPW++
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR

Q9BW72 HIG1 domain family member 2A, mitochondrial5.2e-0852.38Show/hide
Query:  ELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA
        E F  K R  NP+VPIG L TA  LT GL SF +GNS   Q++MR R+  QG TV A+++G A
Subjt:  ELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA

Q9CQJ1 HIG1 domain family member 2A2.0e-0750.79Show/hide
Query:  ELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGAT-VALMVGTA
        E F  K R  NP+VPIG L TA  LT GL  F +G SH  Q++MR R+  QG T VA+++G A
Subjt:  ELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGAT-VALMVGTA

Arabidopsis top hitse value%identityAlignment
AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein9.1e-3275.31Show/hide
Query:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR
        M + EP++++LF  K+RVRNPLVP+GAL+TAGVLTAGLISFR+GNS LGQ+LMR RVVVQGATVALMVGT YYYG+NPW++
Subjt:  MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGACCGAACCCAATTTGGACGAATTATTCGATGGGAAGAGGCGCGTTAGGAATCCTTTGGTTCCTATTGGTGCACTTATCACAGCTGGAGTTCTTACAGCAGG
GTTGATTAGTTTCCGGCAAGGCAACTCTCACTTGGGACAGATGCTAATGAGAGGTCGGGTGGTCGTCCAAGGTGCGACGGTGGCTCTTATGGTTGGCACTGCCTATTACT
ATGGGGAGAATCCATGGCAGCGCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCGACCGAACCCAATTTGGACGAATTATTCGATGGGAAGAGGCGCGTTAGGAATCCTTTGGTTCCTATTGGTGCACTTATCACAGCTGGAGTTCTTACAGCAGG
GTTGATTAGTTTCCGGCAAGGCAACTCTCACTTGGGACAGATGCTAATGAGAGGTCGGGTGGTCGTCCAAGGTGCGACGGTGGCTCTTATGGTTGGCACTGCCTATTACT
ATGGGGAGAATCCATGGCAGCGCAGTTAG
Protein sequenceShow/hide protein sequence
MVATEPNLDELFDGKRRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS